FFCP PHASE1:Hg19::chr9:123639480..123639503,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:123639480..123639503,- to FFCP PHASE1:Hg19::chr9:123639480..123639503,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26147 | |EntrezGene=26147 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24566 | |HGNC=24566 | ||
|TSSclassifier=strong | |||
|UniProt=B3KV88 | |UniProt=B3KV88 | ||
|association_with_transcript=-14bp_to_ENST00000312189,ENST00000544082_5end | |||
|cluster_id=chr9:123639480..123639503,- | |||
|coexpression_cluster_id=C4795 | |||
|description=CAGE_peak_2_at_PHF19_5end | |||
|id=chr9:123639480..123639503,- | |||
|ontology_enrichment_celltype=CL:0000012!2.96e-18!682;CL:0000548!1.37e-17!679;CL:0000004!1.37e-17!679;CL:0000255!1.37e-17!679;CL:0000003!6.34e-16!722;CL:0000066!3.47e-10!254;CL:0000144!8.96e-09!625;CL:0002371!3.54e-08!591;CL:0000063!9.91e-08!578 | |||
|ontology_enrichment_celltype_v019=CL:1000449;4.61e-08;15!CL:0002681;8.23e-07;12!CL:0002584;8.23e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.24e-09,253;CL:1000449,9.02e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.94e-18!235;DOID:14566!1.85e-17!239;DOID:2531!1.88e-17!51;DOID:0060083!1.88e-17!51;DOID:1240!1.46e-14!39;DOID:0050686!7.12e-12!137;DOID:8692!3.35e-11!31;DOID:305!4.89e-07!106;DOID:0050687!5.44e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.50e-12;39!DOID:8692;1.24e-11;31!DOID:2531;2.19e-11;51!DOID:0060083;2.19e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,8.55e-19,51;DOID:0060083,8.55e-19,51;DOID:162,3.83e-17,235;DOID:14566,2.07e-16,239;DOID:1240,9.82e-16,39;DOID:8692,3.89e-12,31;DOID:0050686,4.75e-12,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;4.61e-08;15!UBERON:0004819;4.61e-08;15!UBERON:0001285;4.61e-08;15!UBERON:0007684;4.61e-08;15!UBERON:0001225;8.23e-07;12!UBERON:0008987;8.23e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,9.02e-08,15;UBERON:0009773,9.02e-08,15;UBERON:0001231,9.02e-08,15;UBERON:0001285,9.02e-08,15;UBERON:0007684,9.02e-08,15;UBERON:0004208,9.02e-08,15;UBERON:0006555,3.17e-07,16;UBERON:0004819,3.17e-07,16 | |||
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| ||
|short_description=p2@PHF19 | |||
}} | }} |
Latest revision as of 19:52, 24 September 2015
Short description: | p2@PHF19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PHF19_5end |
Coexpression cluster: | C4795_chronic_hairy_Trabecular_Alveolar_Mesenchymal_Renal_CD14CD16 |
Association with transcript: | -14bp_to_ENST00000312189, ENST00000544082_5end |
EntrezGene: | PHF19 |
HGNC: | 24566 |
UniProt: | B3KV88 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.24e-09 | 253 |
epithelial cell of nephron | 9.02e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 9.02e-08 | 15 |
renal tubule | 9.02e-08 | 15 |
nephron tubule | 9.02e-08 | 15 |
nephron | 9.02e-08 | 15 |
uriniferous tubule | 9.02e-08 | 15 |
nephrogenic mesenchyme | 9.02e-08 | 15 |
excretory tube | 3.17e-07 | 16 |
kidney epithelium | 3.17e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 8.55e-19 | 51 |
immune system cancer | 8.55e-19 | 51 |
cancer | 3.83e-17 | 235 |
disease of cellular proliferation | 2.07e-16 | 239 |
leukemia | 9.82e-16 | 39 |
myeloid leukemia | 3.89e-12 | 31 |
organ system cancer | 4.75e-12 | 137 |