FFCP PHASE1:Hg19::chr9:131447422..131447435,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:131447422..131447435,+ to FFCP PHASE1:Hg19::chr9:131447422..131447435,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6418 | |EntrezGene=6418 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10760 | |HGNC=10760 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VXV2 | |UniProt=Q5VXV2 | ||
|association_with_transcript=57bp_to_NM_001248000_5end | |||
|cluster_id=chr9:131447422..131447435,+ | |||
|description=CAGE_peak_12_at_SET_5end | |||
|id=chr9:131447422..131447435,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.72e-20!254;CL:0002076!5.55e-09!43;CL:0002251!5.77e-09!21;CL:0000223!1.54e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0002336;1.07e-11;1!CL:0002261;1.07e-11;1!CL:0002170;1.07e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002336,1.81e-11,1;CL:0002261,1.81e-11,1;CL:0002170,1.81e-11,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!5.10e-24!106;DOID:0050687!1.64e-20!143;DOID:14566!4.50e-20!239;DOID:162!4.40e-18!235;DOID:1749!3.30e-12!14 | |||
|ontology_enrichment_disease_v019=DOID:0060084;9.29e-15;3!DOID:127;9.29e-15;3!DOID:1749;1.38e-12;14!DOID:3151;1.07e-11;1!DOID:3149;1.07e-11;1!DOID:0060072;2.63e-11;4!DOID:4074;9.69e-07;2!DOID:4905;9.69e-07;2!DOID:3498;9.69e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.23e-14,3;DOID:127,1.23e-14,3;DOID:1749,1.28e-12,14;DOID:3151,9.61e-12,1;DOID:3149,9.61e-12,1;DOID:0060072,3.24e-11,4;DOID:4074,9.96e-07,2;DOID:4905,9.96e-07,2;DOID:3498,9.96e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001004!3.00e-09!72;UBERON:0004119!3.72e-09!169;UBERON:0000925!3.72e-09!169;UBERON:0006595!3.72e-09!169;UBERON:0001007!3.77e-09!155;UBERON:0001555!3.77e-09!155;UBERON:0007026!3.77e-09!155;UBERON:0001041!3.28e-08!98;UBERON:0008947!1.66e-07!38;UBERON:0003258!1.66e-07!38;UBERON:0000072!1.90e-07!46;UBERON:0000077!3.74e-07!130;UBERON:0003729!4.48e-07!5;UBERON:0000065!8.17e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;2.63e-12;1!UBERON:0005056;2.63e-12;1!UBERON:0004176;2.63e-12;1!UBERON:0003343;9.37e-12;4!UBERON:0004785;9.37e-12;4!UBERON:0000974;3.97e-08;6!UBERON:0005910;5.95e-08;6!UBERON:0003729;6.25e-08;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,2.63e-12,1;UBERON:0005056,2.63e-12,1;UBERON:0003343,9.13e-12,4;UBERON:0004785,9.13e-12,4;UBERON:0003729,6.95e-08,13;UBERON:0005910,7.08e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0.309632246632152,0.919421224478927,0,0,0.0774672005803016,0,0,0,0,0,0,0,0.257575567634187,0.145398238779565,0.377875943688809,0,0,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,1.27867425159808,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0.212604299965044,0,0.22465726229299,0.150176892841506,0,0,0.39783335439818,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0.364295288292542,0,0,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0.336672227908132,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.386521706326594,0,0.573609190778008,0,0,0,0.207322110030741,0,0,0,0,0,0,0.721879481669586,0.354920400119532,0.168584690078102,0.241011029883482,0.330881918197182,0,0.237270619111097,0.808987848960987,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.658501712451753,0,0.703702806881416,1.01847289674383,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0.503946384596579,0.283550194484773,0.895585227028483,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.623912584592421,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0.736647911487171,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0.145016693914229,0.0852266274161009,0,0.165284915360978,0,0.127612712494584,0,0.464845549297286,0.31481234683064,0.6970372701606,0,0,0,0,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44333169088268,0,0,0,0,0,0,1.1486170010348,0,0,0,0,0,0,0,0,1.70918513803957,0,0,0.185803175125719,0,0,0,0.199579371432817,0,0,0.649243880549111,0.280797178113459,0,0,0,0.50787533340481,0.1605880751037,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0.37428108081644,0,0.242721043499027,0.222886768554957,0,0,0.296964680832639,0,0,0,0.222617410045812,0.494411622680279,2.95575571379191,0.19924798825107,0,0,0,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0.227586896570999,1.27126825146383,0.945550727071745,0.344743373241465,0,0,0,0,0,0,0,0,0.32681539055697,0.278847488557207,0.0769502585037971,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,5.58394872928413,0,0,0,0,0,0.103688191397247,0,0,0,0,0.284609546029793,0.554698692052555,0,8.23136138280772,0.0870592065804026,0,0,0.19351266257817,0.511625219603299,0,0.0969890164884194,0.176512253383001,0,0.274083849293502,0,0,0.195551382734803,0.240476460754601,0,0.19980960958213,0.432271251462318,0.572682980829578,0,0,0.621262677827163,0.471388069233591,0,0.104602846312333,0,0.288950589901519,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.472699093843342,0.988990300573997,0.202210631562555,0,0.508039992394707,0,0,0,0.137539436597234,0,0,0,0,1.34173875039706,0,0,0.105600336519406,0.35857467866569,0.191915197319445,0,0,0,1.08599920350743,0,1.30634944043764,0,0.410462603746695,0.170388021785422,0,0,0,0,0,0.171086837884329,2.81926008926669,0,0,0,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0.336749488765919,0,0.385239660814607,0,0,0,0,0.734210113519403,0.358177682162975,0,0.657852148736121,0.176689145945881,0,2.36519416914302,0,0,0,0,0.194860308839388,0.132864840313363,0.163565394255844,0,0,0.422624246717254,0,0,0.172214979660816,0,0,0.699397538597222,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59441995455846,0.471878893390961,2.75142897782519,0.346576998451015,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.115233987555779,0,0,0,0.945550727071746,0.222462803784138,0,0,0,0,0.431855182437243,0,0,0,1.3948971044175,0,0,0.62164849248911,0.51215543128185,0.691259661814092,0,0.354996002191696,0.170426809518315,0,0,0,0,0.447421727191169,0.687051635306701,0.365753774946808,0,0,0,0,0,0,0,0.5647304101948,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0.178553938605658,0.352894871715692,0.882655033580851,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.275684698604535,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0.217716747896961,0,0.26940821205835,0.0717222053926763,0,0.0814032686109745,2.02781957167659,0,0.449126010532934,0,0,0,0,0,0.320568492303233 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| ||
|short_description=p12@SET | |||
}} | }} |
Latest revision as of 20:31, 15 September 2015
Short description: | p12@SET |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SET_5end |
Coexpression cluster: | NA |
Association with transcript: | 57bp_to_NM_001248000_5end |
EntrezGene: | SET |
HGNC: | 10760 |
UniProt: | Q5VXV2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
buccal mucosa cell | 1.81e-11 | 1 |
endothelial cell of viscerocranial mucosa | 1.81e-11 | 1 |
keratinized cell of the oral mucosa | 1.81e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 2.63e-12 | 1 |
external female genitalia | 2.63e-12 | 1 |
mucosa of oral region | 9.13e-12 | 4 |
respiratory system mucosa | 9.13e-12 | 4 |
mouth mucosa | 6.95e-08 | 13 |
transitional epithelium | 7.08e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.23e-14 | 3 |
leiomyoma | 1.23e-14 | 3 |
squamous cell carcinoma | 1.28e-12 | 14 |
skin squamous cell carcinoma | 9.61e-12 | 1 |
keratoacanthoma | 9.61e-12 | 1 |
benign neoplasm | 3.24e-11 | 4 |
pancreas adenocarcinoma | 9.96e-07 | 2 |
pancreatic carcinoma | 9.96e-07 | 2 |
pancreatic ductal adenocarcinoma | 9.96e-07 | 2 |