FFCP PHASE1:Mm9::chr1:108438515..108438553,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr1:108438515..108438553,+ to FFCP PHASE1:Mm9::chr1:108438515..108438553,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=252 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000144260,ENSMUST00000149909,uc007cgx.1_5end | |||
|cluster_id=chr1:108438515..108438553,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000144260_5end,CAGE_peak_1_at_ENSMUST00000149909_5end,CAGE_peak_1_at_uc007cgx.1_5end | |||
|id=chr1:108438515..108438553,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!2.17e-17!14;UBERON:0003918!2.17e-17!14;UBERON:0005095!2.17e-17!14;UBERON:0007687!2.17e-17!14;UBERON:0006554!4.57e-15!16;UBERON:0001008!4.13e-14!17;UBERON:0000489!3.42e-11!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.38e-43,14;UBERON:0003918,1.38e-43,14;UBERON:0011143,1.38e-43,14;UBERON:0005095,1.38e-43,14;UBERON:0007687,1.38e-43,14;UBERON:0006554,5.27e-34,18;UBERON:0001008,3.08e-32,19;UBERON:0000489,3.30e-29,21;UBERON:0003103,2.01e-14,43;UBERON:0005172,1.11e-12,49;UBERON:0005173,1.11e-12,49;UBERON:0002417,1.11e-12,49;UBERON:0000916,1.11e-12,49;UBERON:0003104,3.20e-10,61;UBERON:0009142,3.20e-10,61;UBERON:0009569,1.86e-09,66;UBERON:0005177,6.48e-08,79;UBERON:0002100,5.94e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0.459804208866946,0.180062129805349,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1270773567308,1.4255592949172,3.87904974335251,1.05203729835478,5.75452487830741,7.97094799089852,3.767969468193,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.64183841918363,0,0,0,0,0.128050304809739,0.0574354689556133,0,0,0,0,0,0,0,0,0.145346416632329,0,0.169229215783353,0.182927972872773,0,0,0,0.237270036248348,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0.459804208866946,0.180062129805349,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1270773567308,1.4255592949172,3.87904974335251,1.05203729835478,5.75452487830741,7.97094799089852,3.767969468193,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.64183841918363,0,0,0,0,0.128050304809739,0.0574354689556133,0,0,0,0,0,0,0,0,0.145346416632329,0,0.169229215783353,0.182927972872773,0,0,0,0.237270036248348,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p1@ENSMUST00000144260,p1@ENSMUST00000149909,p1@uc007cgx.1 | |||
}} | }} |
Latest revision as of 15:10, 4 August 2015
Short description: | p1@ENSMUST00000144260, p1@ENSMUST00000149909, p1@uc007cgx.1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000144260_5end, CAGE_peak_1_at_ENSMUST00000149909_5end, CAGE_peak_1_at_uc007cgx.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:252 |
Association with transcript: | 0bp_to_ENSMUST00000144260, ENSMUST00000149909, uc007cgx.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 1.38e-43 | 14 |
kidney mesenchyme | 1.38e-43 | 14 |
upper urinary tract | 1.38e-43 | 14 |
kidney rudiment | 1.38e-43 | 14 |
kidney field | 1.38e-43 | 14 |
urinary system structure | 5.27e-34 | 18 |
renal system | 3.08e-32 | 19 |
cavitated compound organ | 3.30e-29 | 21 |
compound organ | 2.01e-14 | 43 |
abdomen element | 1.11e-12 | 49 |
abdominal segment element | 1.11e-12 | 49 |
abdominal segment of trunk | 1.11e-12 | 49 |
abdomen | 1.11e-12 | 49 |
mesenchyme | 3.20e-10 | 61 |
entire embryonic mesenchyme | 3.20e-10 | 61 |
subdivision of trunk | 1.86e-09 | 66 |
trunk region element | 6.48e-08 | 79 |
trunk | 5.94e-07 | 90 |