FFCP PHASE1:Mm9::chr2:75551077..75551096,-: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr2:75551077..75551096,- to FFCP PHASE1:Mm9::chr2:75551077..75551096,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=74 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:75551077..75551096,- | |||
|description=CAGE_peak_at_chr2:75551077..75551096,- | |||
|id=chr2:75551077..75551096,- | |||
|ontology_enrichment_celltype=CL:0002563!3.72e-16!9;CL:0002251!3.72e-16!9;CL:0000239!1.74e-14!6;CL:0000677!1.74e-14!6;CL:0000212!1.74e-14!6;CL:0000584!1.74e-14!6;CL:0000066!1.15e-13!25;CL:0000075!2.61e-12!7;CL:0000223!3.71e-10!20;CL:0002076!3.97e-09!15;CL:0000473!3.61e-08!3;CL:0000627!3.61e-08!3;CL:0000682!3.61e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,6.25e-15,3;CL:0000239,1.30e-13,6;CL:0000677,1.30e-13,6;CL:0000584,1.30e-13,6;CL:0000075,1.07e-11,7;CL:0002563,3.91e-09,9;CL:0002251,3.91e-09,9;CL:0000066,5.96e-09,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.81e-25!15;UBERON:0000160!6.30e-25!43;UBERON:0005409!1.11e-21!59;UBERON:0001242!9.79e-21!13;UBERON:0000060!9.79e-21!13;UBERON:0001262!9.79e-21!13;UBERON:0004786!9.79e-21!13;UBERON:0003350!3.72e-16!9;UBERON:0004808!3.72e-16!9;UBERON:0001277!3.72e-16!9;UBERON:0004923!1.63e-14!24;UBERON:0000485!5.84e-13!11;UBERON:0001007!2.76e-12!128;UBERON:0001555!2.76e-12!128;UBERON:0007026!2.76e-12!128;UBERON:0004119!5.49e-12!130;UBERON:0000925!5.49e-12!130;UBERON:0006595!5.49e-12!130;UBERON:0004921!2.03e-10!126;UBERON:0004185!2.03e-10!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.43e-25,31;UBERON:0000344,4.48e-20,15;UBERON:0005409,3.16e-16,47;UBERON:0001242,1.91e-13,13;UBERON:0001262,1.91e-13,13;UBERON:0004786,1.91e-13,13;UBERON:0004923,3.30e-12,24;UBERON:0001962,2.13e-10,2;UBERON:0001961,2.13e-10,2;UBERON:0001744,2.13e-10,2;UBERON:0003350,3.91e-09,9;UBERON:0004808,3.91e-09,9;UBERON:0001277,3.91e-09,9;UBERON:0001007,1.67e-07,116;UBERON:0001555,1.67e-07,116;UBERON:0007026,1.67e-07,116;UBERON:0000485,1.69e-07,11;UBERON:0004119,2.45e-07,118;UBERON:0000925,2.45e-07,118;UBERON:0006595,2.45e-07,118;UBERON:0002465,3.22e-07,3 | |||
|phase1_expression=0,1.74487703819681,1.81999695755814,12.7034968748869,12.0214975187123,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35984087866154,1.37645568640302,2.8711598205751,4.30761996159075,1.50829862880122,1.14014051673824,0.756090389279792,0,0,0,0,0.288851619751275,0.831173226792462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0.896053774194671,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.667741260153,6.34681359992506,0,0,0.128867461322093,0,0,0,9.49058123089023,0.329397909448022,0.251335208800269,0,0.19496408711912,5.39291645192533,10.3746263939853,11.5501938487533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.16146342563582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.74487703819681,1.81999695755814,12.7034968748869,12.0214975187123,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35984087866154,1.37645568640302,2.8711598205751,4.30761996159075,1.50829862880122,1.14014051673824,0.756090389279792,0,0,0,0,0.288851619751275,0.831173226792462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0.896053774194671,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.667741260153,6.34681359992506,0,0,0.128867461322093,0,0,0,9.49058123089023,0.329397909448022,0.251335208800269,0,0.19496408711912,5.39291645192533,10.3746263939853,11.5501938487533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.16146342563582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:75551077..75551096,- | |||
}} | }} |
Latest revision as of 11:40, 5 August 2015
Short description: | p@chr2:75551077..75551096, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:75551077..75551096, - |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 6.25e-15 | 3 |
brush border epithelial cell | 1.30e-13 | 6 |
gut absorptive cell | 1.30e-13 | 6 |
enterocyte | 1.30e-13 | 6 |
columnar/cuboidal epithelial cell | 1.07e-11 | 7 |
intestinal epithelial cell | 3.91e-09 | 9 |
epithelial cell of alimentary canal | 3.91e-09 | 9 |
epithelial cell | 5.96e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.43e-25 | 31 |
mucosa | 4.48e-20 | 15 |
gastrointestinal system | 3.16e-16 | 47 |
intestinal mucosa | 1.91e-13 | 13 |
wall of intestine | 1.91e-13 | 13 |
gastrointestinal system mucosa | 1.91e-13 | 13 |
organ component layer | 3.30e-12 | 24 |
gut-associated lymphoid tissue | 2.13e-10 | 2 |
mucosa-associated lymphoid tissue | 2.13e-10 | 2 |
lymphoid tissue | 2.13e-10 | 2 |
epithelium of mucosa | 3.91e-09 | 9 |
gastrointestinal system epithelium | 3.91e-09 | 9 |
intestinal epithelium | 3.91e-09 | 9 |
digestive system | 1.67e-07 | 116 |
digestive tract | 1.67e-07 | 116 |
primitive gut | 1.67e-07 | 116 |
simple columnar epithelium | 1.69e-07 | 11 |
endoderm-derived structure | 2.45e-07 | 118 |
endoderm | 2.45e-07 | 118 |
presumptive endoderm | 2.45e-07 | 118 |
lymphoid system | 3.22e-07 | 3 |