FFCP PHASE1:Mm9::chr3:130815433..130815454,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr3:130815433..130815454,+ to FFCP PHASE1:Mm9::chr3:130815433..130815454,+: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=16842 | |EntrezGene=16842 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C402,Q3TEN5 | |UniProt=Q8C402,Q3TEN5 | ||
|association_with_transcript=-260bp_to_ENSMUST00000098611,ENSMUST00000136147,uc008rji.1,uc008rjj.1,uc008rjk.1_5end | |||
|cluster_id=chr3:130815433..130815454,+ | |||
|description=CAGE_peak_15_at_Lef1_5end | |||
|id=chr3:130815433..130815454,+ | |||
|ontology_enrichment_celltype=CL:0000791!8.83e-07!9;CL:0000789!8.83e-07!9;CL:0002420!8.83e-07!9;CL:0002419!8.83e-07!9;CL:0000790!8.83e-07!9 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!4.88e-19!23;UBERON:0000974!4.88e-19!23;UBERON:0004807!4.88e-19!23;UBERON:0005058!4.88e-19!23;UBERON:0003351!4.88e-19!23;UBERON:0009113!4.88e-19!23;UBERON:0003295!4.88e-19!23;UBERON:0009722!4.88e-19!23;UBERON:0005562!4.88e-19!23;UBERON:0007690!4.88e-19!23;UBERON:0006562!4.73e-18!24;UBERON:0003408!4.73e-18!24;UBERON:0001557!4.73e-18!24;UBERON:0001042!4.73e-18!24;UBERON:0008814!4.73e-18!24;UBERON:0009145!4.73e-18!24;UBERON:0004177!7.57e-18!29;UBERON:0000072!1.55e-15!27;UBERON:0002193!1.10e-12!48;UBERON:0002390!1.74e-12!45;UBERON:0003061!1.74e-12!45;UBERON:0000065!2.14e-12!41;UBERON:0001004!5.61e-12!42;UBERON:0000473!8.07e-12!14;UBERON:0000063!5.81e-11!35;UBERON:0003135!7.11e-11!15;UBERON:0003101!4.76e-10!16;UBERON:0000079!4.76e-10!16;UBERON:0004176!2.54e-09!17;UBERON:0009196!2.54e-09!17;UBERON:0009117!2.54e-09!17;UBERON:0005057!5.19e-09!51;UBERON:0000991!1.12e-08!18;UBERON:0005564!1.12e-08!18;UBERON:0001048!9.21e-08!147;UBERON:0002405!9.41e-08!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.41e-20,14;UBERON:0003135,2.93e-19,15;UBERON:0003101,4.18e-18,16;UBERON:0000079,4.18e-18,16;UBERON:0004176,4.37e-17,17;UBERON:0009196,4.37e-17,17;UBERON:0009117,4.37e-17,17;UBERON:0000991,3.52e-16,18;UBERON:0005564,3.52e-16,18;UBERON:0003133,2.57e-12,24;UBERON:0005156,2.02e-11,26;UBERON:0000990,2.02e-11,26;UBERON:0002323,3.25e-08,37;UBERON:0004458,3.25e-08,37;UBERON:0003886,5.17e-08,38;UBERON:0002553,8.01e-08,39 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.645616617207881,0.140788722151667,0.234064526321993,0,0,0.856003649656029,0.34968160967599,0,0,0.699561878128147,0,0.274228867211478,0,4.93251082876205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0.258937883647172,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0.124406970610093,0,0,0.260240885925407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322928853391811,0,0,0.164140899745061,0,0,0.170870880797853,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.0954350947352,0,0.496375471371293,1.55560950675238,0.258319646955462,0.337912250981556,0.234714477291508,0,0.314578033277133,14.4950472495604,15.8416503441826,0.316011120628178,0,0.308132871494482,0.77952493786677,0.716106782669926,0.596044064343795,0.360586348559907,0.295379054349154,0.605798699688886,0.228620419965,0.302478555410522,0.487289403698762,0.192423683280659,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0.645616617207881,0.140788722151667,0.234064526321993,0,0,0.856003649656029,0.34968160967599,0,0,0.699561878128147,0,0.274228867211478,0,4.93251082876205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0.258937883647172,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0.124406970610093,0,0,0.260240885925407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322928853391811,0,0,0.164140899745061,0,0,0.170870880797853,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.0954350947352,0,0.496375471371293,1.55560950675238,0.258319646955462,0.337912250981556,0.234714477291508,0,0.314578033277133,14.4950472495604,15.8416503441826,0.316011120628178,0,0.308132871494482,0.77952493786677,0.716106782669926,0.596044064343795,0.360586348559907,0.295379054349154,0.605798699688886,0.228620419965,0.302478555410522,0.487289403698762,0.192423683280659,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p15@Lef1 | |||
}} | }} |
Latest revision as of 14:56, 1 October 2015
Short description: | p15@Lef1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_Lef1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -260bp_to_ENSMUST00000098611, ENSMUST00000136147, uc008rji.1, uc008rjj.1, uc008rjk.1_5end |
EntrezGene: | Lef1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 1.41e-20 | 14 |
male reproductive organ | 2.93e-19 | 15 |
male organism | 4.18e-18 | 16 |
male reproductive system | 4.18e-18 | 16 |
external genitalia | 4.37e-17 | 17 |
indifferent external genitalia | 4.37e-17 | 17 |
indifferent gonad | 4.37e-17 | 17 |
gonad | 3.52e-16 | 18 |
gonad primordium | 3.52e-16 | 18 |
reproductive organ | 2.57e-12 | 24 |
reproductive structure | 2.02e-11 | 26 |
reproductive system | 2.02e-11 | 26 |
body cavity | 3.25e-08 | 37 |
body cavity or lining | 3.25e-08 | 37 |
body cavity precursor | 5.17e-08 | 38 |
anatomical cavity | 8.01e-08 | 39 |