FFCP PHASE1:Mm9::chr3:39258078..39258082,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr3:39258078..39258082,- to FFCP PHASE1:Mm9::chr3:39258078..39258082,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-251bp_to_ENSMUST00000056409_5end | |||
|cluster_id=chr3:39258078..39258082,- | |||
|description=CAGE_peak_1_at_ENSMUST00000056409_5end | |||
|id=chr3:39258078..39258082,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!7.00e-15!130;UBERON:0000925!7.00e-15!130;UBERON:0006595!7.00e-15!130;UBERON:0001007!8.01e-15!128;UBERON:0001555!8.01e-15!128;UBERON:0007026!8.01e-15!128;UBERON:0004921!2.27e-14!126;UBERON:0004185!2.27e-14!126;UBERON:0003104!6.04e-12!131;UBERON:0009142!6.04e-12!131;UBERON:0001041!1.55e-11!92;UBERON:0000077!3.53e-11!97;UBERON:0005911!4.55e-09!69;UBERON:0002365!6.47e-09!25;UBERON:0002330!6.47e-09!25;UBERON:0000490!8.89e-09!66;UBERON:0003929!2.26e-08!55;UBERON:0005057!2.51e-08!51;UBERON:0000926!4.08e-08!193;UBERON:0004120!4.08e-08!193;UBERON:0006603!4.08e-08!193;UBERON:0000466!5.47e-08!79;UBERON:0002107!1.55e-07!22;UBERON:0007499!1.55e-07!22;UBERON:0006925!1.55e-07!22;UBERON:0009497!1.55e-07!22;UBERON:0000015!1.55e-07!22;UBERON:0002423!1.55e-07!22;UBERON:0006235!1.55e-07!22;UBERON:0008835!1.55e-07!22;UBERON:0003894!1.55e-07!22;UBERON:0004161!1.55e-07!22;UBERON:0008836!1.55e-07!22;UBERON:0002100!1.80e-07!98;UBERON:0000949!1.81e-07!72;UBERON:0009569!2.11e-07!66;UBERON:0002530!2.91e-07!65;UBERON:0005172!6.20e-07!49;UBERON:0005173!6.20e-07!49;UBERON:0002417!6.20e-07!49;UBERON:0000916!6.20e-07!49;UBERON:0009854!8.98e-07!23;UBERON:0009856!8.98e-07!23;UBERON:0005177!9.43e-07!85 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,8.02e-20,25;UBERON:0002330,8.02e-20,25;UBERON:0002107,4.03e-17,22;UBERON:0007499,4.03e-17,22;UBERON:0006925,4.03e-17,22;UBERON:0009497,4.03e-17,22;UBERON:0000015,4.03e-17,22;UBERON:0002423,4.03e-17,22;UBERON:0006235,4.03e-17,22;UBERON:0008835,4.03e-17,22;UBERON:0003894,4.03e-17,22;UBERON:0004161,4.03e-17,22;UBERON:0008836,4.03e-17,22;UBERON:0009854,3.06e-16,23;UBERON:0009856,3.06e-16,23;UBERON:0005256,8.03e-11,45;UBERON:0000949,2.99e-10,72;UBERON:0002100,3.73e-10,90;UBERON:0003929,2.43e-09,55;UBERON:0000490,3.02e-09,66;UBERON:0005177,8.08e-09,79;UBERON:0003914,9.48e-09,47;UBERON:0002530,2.15e-08,65;UBERON:0003104,4.75e-08,61;UBERON:0009142,4.75e-08,61;UBERON:0005911,1.46e-07,69;UBERON:0005172,5.13e-07,49;UBERON:0005173,5.13e-07,49;UBERON:0002417,5.13e-07,49;UBERON:0000916,5.13e-07,49 | |||
|phase1_expression=0.320297694209588,1.74487703819681,0.454999239389536,0.30246421130683,0.500895729946347,0.33575854382378,0.233612640595526,0.645616617207881,0.140788722151667,0,0.34243593645101,0.159544317990673,0.513602189793617,1.13646523144697,0,0,0,0.788655413395594,0.411343300817216,0,0.680346321208558,0.496454756004426,0,0.799962113967033,0.22940928106717,1.14846392823004,0,0.646413698057667,0.950117097281869,1.00812051903972,0.665191531965914,0,0,0,0.288851619751275,0,0.204169356262369,0.418531630736908,0.7813353445238,0.523523743973798,1.17646297606203,0.683045484958446,0.971020706062307,1.25896817975577,1.72340783073175,0,0,0,0.219686182734472,0,0,0,0.167782606057736,0,0.336093799142464,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0.0958454710182364,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.151452386666368,0.226714680320357,0,11.185510400758,0,7.55584468292944,5.84798775702902,1.79210754838934,0.983110940922263,0.340860645156116,0,0.35333957451034,0.281686839553361,0,0,0,0.216491041011214,0,0.505524445014783,0.79928715803342,1.03575153458869,0.445326417194474,0,0,0,0.60289056221049,0.23517741427141,0.251333182659351,0,0.433798070759735,0,0.323533699894818,0,1.45462575940567,0,0,0,0.766371165625774,0.11981512450592,0,0.127070227073065,0.149790639404823,0,0,0.173824320192276,0,0.20778804455956,0,0.305518091550949,0.373220911830279,0.505445516867349,0.210441855886474,0.130120442962704,0,0,0,0.136072998302656,0.2562274405697,0.0937017245597288,0.517406741478031,0,0,0,0.219195732427575,0.556094498451196,0.348252166522167,0.823128545631774,0.199034266818493,0,0.257347907114715,1.98914449576915,0.414251545071004,0,0.36012412292203,0,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0,0.32833492815819,0.162137619091711,0.146199987425332,0.219550115291051,0.536825675041487,0,0,0.660837565967596,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0,0.22237804384487,0,1.89811624617805,0.164698954724011,0.502670417600539,0.397912944082302,0.779856348476481,0,0.432276099749388,1.1948476395262,0.379335801906163,0.228497025219458,0,0,0.193952487167626,0.140271639780637,0.252946148497029,0.442830443938806,0.627994911365499,0.616985819609003,6.81841042300442,0.166845105716094,0.589676985339609,0.899448449539415,0.202860121388503,0.241177159752417,1.2731292589071,0.287696137450811,0.324270453550071,1.64736847912849,2.87536413054709,2.97712758134803,2.18426371180192,5.80931419278357,4.84373016509163,2.41221760681684,1.10851914099963,0,0.162964976442026,0,0.469380496577004,0.502518772325447,0,0.195133647857799,0.945810864637146,0.44292937929755,0.318909537314974,0.81931657357869,0.518054945597687,0.433947175744535,0,0.54390568381871,0.491764273019036,1.37968373152366,0,0,0.163934945376675,0,0,0,0,0,0.222798674082394,0,0,0,0.395287777946524,0.321321316421807,0.99358059645788,0.178065603667255,0.325773918707152,1.15479086080775,2.65490276679926,0,0.906970670894253,1.69744571780308,0,0.614870295887855,0.258428293168221,1.09060118843252,0,1.8962205476149,1.05418608574999,3.09406629744561,0.340439605753788,0.18006109403131,0,0.214337035031592,0,0.356737635204141,0.493647061806363,0,0,1.27099242518292,3.52845436887939,0,0.161464426695906,0.120625849856312,0,0.164140899745061,0.582961673259701,0,1.02522528478712,0.412773735926445,0.185194527369712,0.376736914009382,0.410082683163076,0.457556346413045,0.169978429993855,0.279902904647316,0.552799895217695,0,0,0.406638934253697,0.108005340821801,0.418176592028937,0.218362563746178,0.539457385539283,0.743881101528023,0.26175594198403,0.259229946583586,3.10669656543463,0,0.299033092087958,0,0.194451188344048,0,0.168956125490778,0.352071715937262,0,0.104859344425711,0,0,1.58005560314089,0.405450430580328,0.616265742988964,0.51968329191118,0.179026695667481,0.79472541912506,0.480781798079875,0.443068581523732,0.403865799792591,0.228620419965,0.100826185136841,0.584747284438515,0.288635524920988,0.467507608726276,0.453460767230423,0,0,0,0,0.563047426353546,0.549454872801795,0,0.501572104035363,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,0.31136204275253,0,0,0,0,0.183843508450014,0.888986911206461,0.206035057238894,0,0.252697211763798,0,0.377252682772152,0.468207537349412,0.256100609619477,0.402048282689293,0,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0.715308569841963,0.145346416632329,0.282328141245992,0.169229215783353,0.365855945745545,0,0.271608227691724,0,0.237270036248348,0.197008964751127,0,0,0.192906610981141,0,0.467863216890817,0.214871054048298,0,0.220591419119515,0 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|phase1_expression=0.320297694209588,1.74487703819681,0.454999239389536,0.30246421130683,0.500895729946347,0.33575854382378,0.233612640595526,0.645616617207881,0.140788722151667,0,0.34243593645101,0.159544317990673,0.513602189793617,1.13646523144697,0,0,0,0.788655413395594,0.411343300817216,0,0.680346321208558,0.496454756004426,0,0.799962113967033,0.22940928106717,1.14846392823004,0,0.646413698057667,0.950117097281869,1.00812051903972,0.665191531965914,0,0,0,0.288851619751275,0,0.204169356262369,0.418531630736908,0.7813353445238,0.523523743973798,1.17646297606203,0.683045484958446,0.971020706062307,1.25896817975577,1.72340783073175,0,0,0,0.219686182734472,0,0,0,0.167782606057736,0,0.336093799142464,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0.0958454710182364,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.151452386666368,0.226714680320357,0,11.185510400758,0,7.55584468292944,5.84798775702902,1.79210754838934,0.983110940922263,0.340860645156116,0,0.35333957451034,0.281686839553361,0,0,0,0.216491041011214,0,0.505524445014783,0.79928715803342,1.03575153458869,0.445326417194474,0,0,0,0.60289056221049,0.23517741427141,0.251333182659351,0,0.433798070759735,0,0.323533699894818,0,1.45462575940567,0,0,0,0.766371165625774,0.11981512450592,0,0.127070227073065,0.149790639404823,0,0,0.173824320192276,0,0.20778804455956,0,0.305518091550949,0.373220911830279,0.505445516867349,0.210441855886474,0.130120442962704,0,0,0,0.136072998302656,0.2562274405697,0.0937017245597288,0.517406741478031,0,0,0,0.219195732427575,0.556094498451196,0.348252166522167,0.823128545631774,0.199034266818493,0,0.257347907114715,1.98914449576915,0.414251545071004,0,0.36012412292203,0,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0,0.32833492815819,0.162137619091711,0.146199987425332,0.219550115291051,0.536825675041487,0,0,0.660837565967596,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0,0.22237804384487,0,1.89811624617805,0.164698954724011,0.502670417600539,0.397912944082302,0.779856348476481,0,0.432276099749388,1.1948476395262,0.379335801906163,0.228497025219458,0,0,0.193952487167626,0.140271639780637,0.252946148497029,0.442830443938806,0.627994911365499,0.616985819609003,6.81841042300442,0.166845105716094,0.589676985339609,0.899448449539415,0.202860121388503,0.241177159752417,1.2731292589071,0.287696137450811,0.324270453550071,1.64736847912849,2.87536413054709,2.97712758134803,2.18426371180192,5.80931419278357,4.84373016509163,2.41221760681684,1.10851914099963,0,0.162964976442026,0,0.469380496577004,0.502518772325447,0,0.195133647857799,0.945810864637146,0.44292937929755,0.318909537314974,0.81931657357869,0.518054945597687,0.433947175744535,0,0.54390568381871,0.491764273019036,1.37968373152366,0,0,0.163934945376675,0,0,0,0,0,0.222798674082394,0,0,0,0.395287777946524,0.321321316421807,0.99358059645788,0.178065603667255,0.325773918707152,1.15479086080775,2.65490276679926,0,0.906970670894253,1.69744571780308,0,0.614870295887855,0.258428293168221,1.09060118843252,0,1.8962205476149,1.05418608574999,3.09406629744561,0.340439605753788,0.18006109403131,0,0.214337035031592,0,0.356737635204141,0.493647061806363,0,0,1.27099242518292,3.52845436887939,0,0.161464426695906,0.120625849856312,0,0.164140899745061,0.582961673259701,0,1.02522528478712,0.412773735926445,0.185194527369712,0.376736914009382,0.410082683163076,0.457556346413045,0.169978429993855,0.279902904647316,0.552799895217695,0,0,0.406638934253697,0.108005340821801,0.418176592028937,0.218362563746178,0.539457385539283,0.743881101528023,0.26175594198403,0.259229946583586,3.10669656543463,0,0.299033092087958,0,0.194451188344048,0,0.168956125490778,0.352071715937262,0,0.104859344425711,0,0,1.58005560314089,0.405450430580328,0.616265742988964,0.51968329191118,0.179026695667481,0.79472541912506,0.480781798079875,0.443068581523732,0.403865799792591,0.228620419965,0.100826185136841,0.584747284438515,0.288635524920988,0.467507608726276,0.453460767230423,0,0,0,0,0.563047426353546,0.549454872801795,0,0.501572104035363,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,0.31136204275253,0,0,0,0,0.183843508450014,0.888986911206461,0.206035057238894,0,0.252697211763798,0,0.377252682772152,0.468207537349412,0.256100609619477,0.402048282689293,0,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0.715308569841963,0.145346416632329,0.282328141245992,0.169229215783353,0.365855945745545,0,0.271608227691724,0,0.237270036248348,0.197008964751127,0,0,0.192906610981141,0,0.467863216890817,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p1@ENSMUST00000056409 | |||
}} | }} |
Latest revision as of 10:28, 6 August 2015
Short description: | p1@ENSMUST00000056409 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000056409_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | -251bp_to_ENSMUST00000056409_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
exocrine gland | 8.02e-20 | 25 |
exocrine system | 8.02e-20 | 25 |
liver | 4.03e-17 | 22 |
epithelial sac | 4.03e-17 | 22 |
digestive gland | 4.03e-17 | 22 |
epithelium of foregut-midgut junction | 4.03e-17 | 22 |
anatomical boundary | 4.03e-17 | 22 |
hepatobiliary system | 4.03e-17 | 22 |
foregut-midgut junction | 4.03e-17 | 22 |
hepatic diverticulum | 4.03e-17 | 22 |
liver primordium | 4.03e-17 | 22 |
septum transversum | 4.03e-17 | 22 |
liver bud | 4.03e-17 | 22 |
digestive tract diverticulum | 3.06e-16 | 23 |
sac | 3.06e-16 | 23 |
trunk mesenchyme | 8.03e-11 | 45 |
endocrine system | 2.99e-10 | 72 |
trunk | 3.73e-10 | 90 |
gut epithelium | 2.43e-09 | 55 |
unilaminar epithelium | 3.02e-09 | 66 |
trunk region element | 8.08e-09 | 79 |
epithelial tube | 9.48e-09 | 47 |
gland | 2.15e-08 | 65 |
mesenchyme | 4.75e-08 | 61 |
entire embryonic mesenchyme | 4.75e-08 | 61 |
endo-epithelium | 1.46e-07 | 69 |
abdomen element | 5.13e-07 | 49 |
abdominal segment element | 5.13e-07 | 49 |
abdominal segment of trunk | 5.13e-07 | 49 |
abdomen | 5.13e-07 | 49 |