FFCP PHASE1:Mm9::chr5:114593442..114593450,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr5:114593442..114593450,+ to FFCP PHASE1:Mm9::chr5:114593442..114593450,+: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=395 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:114593442..114593450,+ | |||
|description=CAGE_peak_at_chr5:114593442..114593450,+ | |||
|id=chr5:114593442..114593450,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.61e-18!9;CL:0002251!2.61e-18!9;CL:0000239!1.34e-11!6;CL:0000677!1.34e-11!6;CL:0000212!1.34e-11!6;CL:0000584!1.34e-11!6;CL:0000066!7.63e-11!25;CL:0002076!2.06e-10!15;CL:0000075!6.98e-10!7;CL:0000473!2.12e-08!3;CL:0000627!2.12e-08!3;CL:0000682!2.12e-08!3;CL:0002250!2.25e-08!3;CL:0000223!1.86e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.05e-26,6;CL:0000677,4.05e-26,6;CL:0000584,4.05e-26,6;CL:0002563,8.07e-25,9;CL:0002251,8.07e-25,9;CL:0000075,2.11e-22,7;CL:0002076,8.28e-15,15;CL:0000066,8.01e-12,25;CL:0000223,4.90e-11,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!9.76e-33!15;UBERON:0001242!4.52e-28!13;UBERON:0000060!4.52e-28!13;UBERON:0001262!4.52e-28!13;UBERON:0004786!4.52e-28!13;UBERON:0000160!9.69e-25!43;UBERON:0004923!3.18e-19!24;UBERON:0005409!1.32e-18!59;UBERON:0003350!2.61e-18!9;UBERON:0004808!2.61e-18!9;UBERON:0001277!2.61e-18!9;UBERON:0000485!1.02e-14!11;UBERON:0000331!2.46e-09!3;UBERON:0002116!2.46e-09!3;UBERON:0001204!2.46e-09!3;UBERON:0001168!2.46e-09!3;UBERON:0001007!3.64e-08!128;UBERON:0001555!3.64e-08!128;UBERON:0007026!3.64e-08!128;UBERON:0004119!5.96e-08!130;UBERON:0000925!5.96e-08!130;UBERON:0006595!5.96e-08!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.36e-41,15;UBERON:0001242,1.45e-38,13;UBERON:0001262,1.45e-38,13;UBERON:0004786,1.45e-38,13;UBERON:0004923,2.76e-25,24;UBERON:0003350,8.07e-25,9;UBERON:0004808,8.07e-25,9;UBERON:0001277,8.07e-25,9;UBERON:0000160,1.99e-23,31;UBERON:0000485,2.83e-20,11;UBERON:0000331,4.00e-20,3;UBERON:0002116,4.00e-20,3;UBERON:0001204,4.00e-20,3;UBERON:0001168,4.00e-20,3;UBERON:0005409,3.74e-18,47;UBERON:0002108,2.96e-15,4;UBERON:0001007,8.02e-08,116;UBERON:0001555,8.02e-08,116;UBERON:0007026,8.02e-08,116;UBERON:0004119,1.16e-07,118;UBERON:0000925,1.16e-07,118;UBERON:0006595,1.16e-07,118;UBERON:0003199,2.05e-07,1 | |||
|phase1_expression=0,1.39590163055744,1.81999695755814,0,1.00179145989269,4.70061961353291,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,1.60586496747019,0.57423196411502,0.430761996159075,2.15471232685889,2.66032787238923,2.52030129759931,2.21730510655305,0,0,0,2.02196133825892,0.332469290716985,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0.268412837520744,0,0,0.330418782983798,1.32225283331772,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0.754005626400808,0.596869416123452,0.19496408711912,0.898819408654221,0,1.99141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49960427887841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,1.39590163055744,1.81999695755814,0,1.00179145989269,4.70061961353291,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,1.60586496747019,0.57423196411502,0.430761996159075,2.15471232685889,2.66032787238923,2.52030129759931,2.21730510655305,0,0,0,2.02196133825892,0.332469290716985,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0.268412837520744,0,0,0.330418782983798,1.32225283331772,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0.754005626400808,0.596869416123452,0.19496408711912,0.898819408654221,0,1.99141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49960427887841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr5:114593442..114593450,+ | |||
}} | }} |
Latest revision as of 01:53, 6 August 2015
Short description: | p@chr5:114593442..114593450, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:114593442..114593450, + |
Coexpression cluster: | MCL_coexpression_mm9:395 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.05e-26 | 6 |
gut absorptive cell | 4.05e-26 | 6 |
enterocyte | 4.05e-26 | 6 |
intestinal epithelial cell | 8.07e-25 | 9 |
epithelial cell of alimentary canal | 8.07e-25 | 9 |
columnar/cuboidal epithelial cell | 2.11e-22 | 7 |
endo-epithelial cell | 8.28e-15 | 15 |
epithelial cell | 8.01e-12 | 25 |
endodermal cell | 4.90e-11 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 5.36e-41 | 15 |
intestinal mucosa | 1.45e-38 | 13 |
wall of intestine | 1.45e-38 | 13 |
gastrointestinal system mucosa | 1.45e-38 | 13 |
organ component layer | 2.76e-25 | 24 |
epithelium of mucosa | 8.07e-25 | 9 |
gastrointestinal system epithelium | 8.07e-25 | 9 |
intestinal epithelium | 8.07e-25 | 9 |
intestine | 1.99e-23 | 31 |
simple columnar epithelium | 2.83e-20 | 11 |
ileal mucosa | 4.00e-20 | 3 |
ileum | 4.00e-20 | 3 |
mucosa of small intestine | 4.00e-20 | 3 |
wall of small intestine | 4.00e-20 | 3 |
gastrointestinal system | 3.74e-18 | 47 |
small intestine | 2.96e-15 | 4 |
digestive system | 8.02e-08 | 116 |
digestive tract | 8.02e-08 | 116 |
primitive gut | 8.02e-08 | 116 |
endoderm-derived structure | 1.16e-07 | 118 |
endoderm | 1.16e-07 | 118 |
presumptive endoderm | 1.16e-07 | 118 |
egg chamber | 2.05e-07 | 1 |