Personal tools

FFCP PHASE1:Mm9::chr7:106289776..106289804,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr7:106289776..106289804,-
|DHSsupport=NA
|short_description=p3@Uvrag
|DPIdataset=NA
|description=CAGE_peak_3_at_Uvrag_5end
|association_with_transcript=-122bp_to_ENSMUST00000037968,NM_178635,uc009ikz.2,uc009ilb.2,uc009ild.2_5end
|EntrezGene=78610
|EntrezGene=78610
|HGNC=
|HGNC=
|MCL_coexpression_id=4
|TSSclassifier=NA
|UniProt=Q8C0K8,Q8BVI8,Q8BJ94
|UniProt=Q8C0K8,Q8BVI8,Q8BJ94
|association_with_transcript=-122bp_to_ENSMUST00000037968,NM_178635,uc009ikz.2,uc009ilb.2,uc009ild.2_5end
|cluster_id=chr7:106289776..106289804,-
|description=CAGE_peak_3_at_Uvrag_5end
|id=chr7:106289776..106289804,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002370!1.03e-09!23;UBERON:0000974!1.03e-09!23;UBERON:0004807!1.03e-09!23;UBERON:0005058!1.03e-09!23;UBERON:0003351!1.03e-09!23;UBERON:0009113!1.03e-09!23;UBERON:0003295!1.03e-09!23;UBERON:0009722!1.03e-09!23;UBERON:0005562!1.03e-09!23;UBERON:0007690!1.03e-09!23;UBERON:0006562!4.95e-09!24;UBERON:0003408!4.95e-09!24;UBERON:0001557!4.95e-09!24;UBERON:0001042!4.95e-09!24;UBERON:0008814!4.95e-09!24;UBERON:0009145!4.95e-09!24;UBERON:0000065!1.13e-08!41;UBERON:0001004!2.96e-08!42;UBERON:0002193!2.35e-07!48;UBERON:0000072!2.54e-07!27
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.39e-37,23;UBERON:0000974,1.39e-37,23;UBERON:0004807,1.39e-37,23;UBERON:0005058,1.39e-37,23;UBERON:0003351,1.39e-37,23;UBERON:0009113,1.39e-37,23;UBERON:0003295,1.39e-37,23;UBERON:0009722,1.39e-37,23;UBERON:0005562,1.39e-37,23;UBERON:0007690,1.39e-37,23;UBERON:0006562,5.24e-36,24;UBERON:0003408,5.24e-36,24;UBERON:0001557,5.24e-36,24;UBERON:0001042,5.24e-36,24;UBERON:0008814,5.24e-36,24;UBERON:0009145,5.24e-36,24;UBERON:0000072,5.59e-32,27;UBERON:0004177,9.35e-30,29;UBERON:0005057,9.35e-30,29;UBERON:0000077,1.33e-24,35;UBERON:0007811,6.53e-24,36;UBERON:0000065,5.93e-21,41;UBERON:0001004,1.91e-20,42;UBERON:0000153,5.82e-20,43;UBERON:0002390,4.66e-19,45;UBERON:0003061,4.66e-19,45;UBERON:0002193,7.66e-18,48;UBERON:0002405,7.66e-18,48;UBERON:0003929,1.62e-15,55;UBERON:0002368,3.46e-14,60;UBERON:0002530,4.65e-13,65;UBERON:0000490,7.46e-13,66;UBERON:0005911,2.84e-12,69;UBERON:0000949,9.68e-12,72;UBERON:0001041,1.63e-10,80;UBERON:0003081,1.27e-09,87;UBERON:0004921,3.40e-07,114;UBERON:0001007,4.64e-07,116;UBERON:0001555,4.64e-07,116;UBERON:0007026,4.64e-07,116;UBERON:0004119,6.28e-07,118;UBERON:0000925,6.28e-07,118;UBERON:0006595,6.28e-07,118;UBERON:0000926,8.41e-07,120;UBERON:0004120,8.41e-07,120;UBERON:0006603,8.41e-07,120
|phase1_expression=0,0.697950815278722,0,0,0,0.33575854382378,0.233612640595526,0.258246646883153,0.563154888606667,0.70219357896598,0,0,0.684802919724823,0.34968160967599,0.666219523631325,0,0,0.315462165358238,0.411343300817216,0.42438965179803,0.17008658030214,0,0,0.319984845586813,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0.683045484958446,0,0,0,0.183546752161682,0,0,0,0,0,0,0.503347818173209,0.725362142011344,0.336093799142464,0,0,0,0.202316460859598,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0.56276261003168,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0,0,0,0,0,0,0,0,0.22836775943812,0.517875767294343,0.148442139064825,0,0,0.230615497256059,0,0,0.125666591329675,0,0.289198713839823,0,0,0,0,0,0,0.209446706813455,0.255457055208591,0.11981512450592,0,0,0.299581278809645,0,0.502617408451458,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0.292399974850665,0.219550115291051,0.134206418760372,0.210289948564127,0,0,0,0,0.232236671860439,0,0.403367049246685,0,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0.193952487167626,0.280543279561274,0,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0.189491411770485,0,0.339490171550376,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0,0.318909537314974,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0.516856586336442,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0.354680467284547,0,0.329098041204242,0.304464949114599,0,0.21183207086382,0,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0.314578033277133,0.241584120826006,0,1.26404448251271,0,0.102710957164827,0.25984164595559,0.358053391334963,1.39076948346885,1.20195449519969,2.06765338044408,2.3222283488074,1.98137697303,3.42809029465258,3.41102582589133,2.79014340756955,3.85693777199178,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.25384382367503,0,0,0,0,0.118635018124174,0.492522411877817,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0
|phase1_expression=0,0.697950815278722,0,0,0,0.33575854382378,0.233612640595526,0.258246646883153,0.563154888606667,0.70219357896598,0,0,0.684802919724823,0.34968160967599,0.666219523631325,0,0,0.315462165358238,0.411343300817216,0.42438965179803,0.17008658030214,0,0,0.319984845586813,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0.683045484958446,0,0,0,0.183546752161682,0,0,0,0,0,0,0.503347818173209,0.725362142011344,0.336093799142464,0,0,0,0.202316460859598,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0.56276261003168,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0,0,0,0,0,0,0,0,0.22836775943812,0.517875767294343,0.148442139064825,0,0,0.230615497256059,0,0,0.125666591329675,0,0.289198713839823,0,0,0,0,0,0,0.209446706813455,0.255457055208591,0.11981512450592,0,0,0.299581278809645,0,0.502617408451458,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0.292399974850665,0.219550115291051,0.134206418760372,0.210289948564127,0,0,0,0,0.232236671860439,0,0.403367049246685,0,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0.193952487167626,0.280543279561274,0,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0.189491411770485,0,0.339490171550376,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0,0.318909537314974,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0.516856586336442,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0.354680467284547,0,0.329098041204242,0.304464949114599,0,0.21183207086382,0,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0.314578033277133,0.241584120826006,0,1.26404448251271,0,0.102710957164827,0.25984164595559,0.358053391334963,1.39076948346885,1.20195449519969,2.06765338044408,2.3222283488074,1.98137697303,3.42809029465258,3.41102582589133,2.79014340756955,3.85693777199178,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.25384382367503,0,0,0,0,0.118635018124174,0.492522411877817,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0
|short_description=p3@Uvrag
}}
}}

Latest revision as of 14:05, 25 September 2015

Short description:p3@Uvrag
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Uvrag_5end
Coexpression cluster:MCL_coexpression_mm9:4
Association with transcript: -122bp_to_ENSMUST00000037968, NM_178635, uc009ikz.2, uc009ilb.2, uc009ild.2_5end
EntrezGene:Uvrag
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0.0
1.0
2.0
3.0
4.0




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data