FFCP PHASE1:Mm9::chr9:44262840..44262856,-: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr9:44262840..44262856,- to FFCP PHASE1:Mm9::chr9:44262840..44262856,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=22269 | |EntrezGene=22269 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=95 | |||
|TSSclassifier=NA | |||
|UniProt=Q3SXK0 | |UniProt=Q3SXK0 | ||
|association_with_transcript=0bp_to_ENSMUST00000047740,NM_009476,uc009pds.1_5end | |||
|cluster_id=chr9:44262840..44262856,- | |||
|description=CAGE_peak_1_at_Upk2_5end | |||
|id=chr9:44262840..44262856,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001008!4.16e-10!17;UBERON:0006554!2.78e-09!16;UBERON:0005153!5.53e-08!17;UBERON:0002113!1.11e-07!14;UBERON:0003918!1.11e-07!14;UBERON:0005095!1.11e-07!14;UBERON:0007687!1.11e-07!14;UBERON:0005178!4.45e-07!17;UBERON:0005181!4.45e-07!17;UBERON:0002224!4.45e-07!17;UBERON:0000915!4.45e-07!17;UBERON:0008947!4.45e-07!17;UBERON:0003258!4.45e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001008,3.81e-13,19;UBERON:0006554,1.19e-11,18;UBERON:0002113,2.30e-10,14;UBERON:0003918,2.30e-10,14;UBERON:0011143,2.30e-10,14;UBERON:0005095,2.30e-10,14;UBERON:0007687,2.30e-10,14;UBERON:0000489,5.80e-08,21;UBERON:0000162,7.02e-07,3;UBERON:0001353,7.02e-07,3;UBERON:0000163,7.02e-07,3;UBERON:0006866,7.02e-07,3;UBERON:0001046,7.02e-07,3;UBERON:0000164,7.02e-07,3;UBERON:0000931,7.02e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82577746171277,0,0,0,0.845060518660083,0,0,0,0.865964164044856,0.253359865475099,0.505524445014783,1.94112595522402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.870848794270651,0.252722758433675,0,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0.862271971731369,0,0,0,0,0,0,0,0,0,0,0,0.469052119962192,0,0.23674473558521,0,0,0,0.268273401399619,0,0,0,0,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0.232236671860439,1.15980715189884,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,2.25415471346161,5.90588850751411,8.53390943537553,4.20814919341911,1.01178459398812,2.95220295959204,1.56998727841375,1.48076596706161,0,0,0.393117990226406,0,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0,1.47802552133284,0,0.162964976442026,0,0.704070744865506,0.837531287209079,0.714130922658041,0.390267295715598,1.26108115284953,1.55025282754142,0.478364305972461,0.81931657357869,1.72684981865896,0.578596234326046,0,0,6.39293554924747,1.10374698521893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93196526836437,0.164970122972535,0,0.242780636154981,0.302323556964751,0.377210159511796,0.885905678642318,0,0,0,0,0,0,0,0,0,0.258717367565509,0.428674070063185,0,0,0,0,0.704015124191131,0.42366414172764,1.32317038832977,0,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,9.14937602070819,11.2325554454673,8.99079672862215,6.11415178489297,1.88810084938749,0.661227645802687,0,0,0,0,0.598066184175915,0.330916980914195,0,0.129159823477731,0,0,0,0.104859344425711,0.241584120826006,0,0.316011120628178,1.21635129174099,0.924398614483445,0.389762468933385,0.537080087002444,0.198681354781265,0.120195449519969,0,0.201932899896295,0.228620419965,0.302478555410522,0.292373642219257,0.0962118416403295,0,0,1.33191572024439,0.0897138566094757,0.335769232728157,572.807146305445,0,0,2.14368379079066,24.0754609936974,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.486213434136588,0,0.183843508450014,0.666740183404846,1.44224540067226,0.320919209591815,2.02157769411038,1.2673964994512,1.88626341386076,0.561849044819294,1.79270426733634,0.689225627467359,1.42888107384922,0.811190281613988,0.578727661391115,1.23625770240992,0.735994600671987,1.02860775715625,0.532427418478012,0.953744759789284,1.16277133305863,1.03520318456864,0.676916863133412,0.73171189149109,1.05227884575137,1.62964936615034,1.12228454331548,1.06771516311757,0.29551344712669,1.22769312950907,1.08455788830176,1.15743966588685,0.499621155875892,1.16965804222704,1.28922632428979,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82577746171277,0,0,0,0.845060518660083,0,0,0,0.865964164044856,0.253359865475099,0.505524445014783,1.94112595522402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.870848794270651,0.252722758433675,0,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0.862271971731369,0,0,0,0,0,0,0,0,0,0,0,0.469052119962192,0,0.23674473558521,0,0,0,0.268273401399619,0,0,0,0,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0.232236671860439,1.15980715189884,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,2.25415471346161,5.90588850751411,8.53390943537553,4.20814919341911,1.01178459398812,2.95220295959204,1.56998727841375,1.48076596706161,0,0,0.393117990226406,0,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0,1.47802552133284,0,0.162964976442026,0,0.704070744865506,0.837531287209079,0.714130922658041,0.390267295715598,1.26108115284953,1.55025282754142,0.478364305972461,0.81931657357869,1.72684981865896,0.578596234326046,0,0,6.39293554924747,1.10374698521893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93196526836437,0.164970122972535,0,0.242780636154981,0.302323556964751,0.377210159511796,0.885905678642318,0,0,0,0,0,0,0,0,0,0.258717367565509,0.428674070063185,0,0,0,0,0.704015124191131,0.42366414172764,1.32317038832977,0,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,9.14937602070819,11.2325554454673,8.99079672862215,6.11415178489297,1.88810084938749,0.661227645802687,0,0,0,0,0.598066184175915,0.330916980914195,0,0.129159823477731,0,0,0,0.104859344425711,0.241584120826006,0,0.316011120628178,1.21635129174099,0.924398614483445,0.389762468933385,0.537080087002444,0.198681354781265,0.120195449519969,0,0.201932899896295,0.228620419965,0.302478555410522,0.292373642219257,0.0962118416403295,0,0,1.33191572024439,0.0897138566094757,0.335769232728157,572.807146305445,0,0,2.14368379079066,24.0754609936974,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.486213434136588,0,0.183843508450014,0.666740183404846,1.44224540067226,0.320919209591815,2.02157769411038,1.2673964994512,1.88626341386076,0.561849044819294,1.79270426733634,0.689225627467359,1.42888107384922,0.811190281613988,0.578727661391115,1.23625770240992,0.735994600671987,1.02860775715625,0.532427418478012,0.953744759789284,1.16277133305863,1.03520318456864,0.676916863133412,0.73171189149109,1.05227884575137,1.62964936615034,1.12228454331548,1.06771516311757,0.29551344712669,1.22769312950907,1.08455788830176,1.15743966588685,0.499621155875892,1.16965804222704,1.28922632428979,0,0.220591419119515,0 | ||
|short_description=p1@Upk2 | |||
}} | }} |
Latest revision as of 16:58, 26 September 2015
Short description: | p1@Upk2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Upk2_5end |
Coexpression cluster: | MCL_coexpression_mm9:95 |
Association with transcript: | 0bp_to_ENSMUST00000047740, NM_009476, uc009pds.1_5end |
EntrezGene: | Upk2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
renal system | 3.81e-13 | 19 |
urinary system structure | 1.19e-11 | 18 |
kidney | 2.30e-10 | 14 |
kidney mesenchyme | 2.30e-10 | 14 |
upper urinary tract | 2.30e-10 | 14 |
kidney rudiment | 2.30e-10 | 14 |
kidney field | 2.30e-10 | 14 |
cavitated compound organ | 5.80e-08 | 21 |
cloaca | 7.02e-07 | 3 |
anal region | 7.02e-07 | 3 |
embryonic cloaca | 7.02e-07 | 3 |
terminal part of digestive tract | 7.02e-07 | 3 |
hindgut | 7.02e-07 | 3 |
primitive urogenital sinus | 7.02e-07 | 3 |
proctodeum | 7.02e-07 | 3 |