FFCP PHASE1:Mm9::chr9:55278152..55278171,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr9:55278152..55278171,+ to FFCP PHASE1:Mm9::chr9:55278152..55278171,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3710 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:55278152..55278171,+ | |||
|description=CAGE_peak_at_chr9:55278152..55278171,+ | |||
|id=chr9:55278152..55278171,+ | |||
|ontology_enrichment_celltype=CL:0002563!9.79e-07!9;CL:0002251!9.79e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.03e-18,9;CL:0002251,2.03e-18,9;CL:0000066,4.50e-15,25;CL:0000075,1.26e-12,7;CL:0000682,1.84e-11,3;CL:0002250,1.02e-10,3;CL:0002076,1.12e-10,15;CL:0000239,6.51e-10,6;CL:0000677,6.51e-10,6;CL:0000584,6.51e-10,6;CL:0000223,9.02e-08,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.04e-19!59;UBERON:0000160!4.54e-17!43;UBERON:0000344!2.27e-09!15;UBERON:0000485!4.88e-08!11;UBERON:0001242!1.10e-07!13;UBERON:0000060!1.10e-07!13;UBERON:0001262!1.10e-07!13;UBERON:0004786!1.10e-07!13;UBERON:0003350!9.79e-07!9;UBERON:0004808!9.79e-07!9;UBERON:0001277!9.79e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,8.20e-22,15;UBERON:0000485,3.03e-19,11;UBERON:0003350,2.03e-18,9;UBERON:0004808,2.03e-18,9;UBERON:0001277,2.03e-18,9;UBERON:0000160,2.47e-18,31;UBERON:0001242,3.22e-16,13;UBERON:0001262,3.22e-16,13;UBERON:0004786,3.22e-16,13;UBERON:0005409,5.62e-13,47;UBERON:0004923,5.97e-13,24;UBERON:0001962,4.89e-08,2;UBERON:0001961,4.89e-08,2;UBERON:0001744,4.89e-08,2 | |||
|phase1_expression=0.480446541314382,5.58360652222978,7.27998783023258,0.30246421130683,0,5.20425742926858,9.1108929832255,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.425216450755349,0,0,5.75972722056264,3.67054849707472,8.03924749761028,3.4460959692726,8.40337807474967,0.570070258369122,0.504060259519861,4.6563407237614,0,0,0,1.44425809875637,5.15327400611326,3.26670970019791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0.122490799214954,0,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,2.11265129665021,0,0,0,0.216491041011214,0,0,0.22836775943812,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0,0.209446706813455,1.27728527604296,0,0,0,0,0,0.125654352112864,0.173824320192276,0,0,0,0,0,0,0,0,0,0,0,0.136072998302656,0,0,0,0,0.567318240503458,0.175951124163949,0.43839146485515,0.556094498451196,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.17340679996253,0.853153002140936,0.696710015581316,1.03093969057675,1.00841762311671,0.667134131534611,0.190225626112559,0.949058123089023,0.658795818896044,0.251335208800269,0.596869416123452,0.779856348476481,0,0.432276099749388,1.1948476395262,0.379335801906163,0.228497025219458,0,0,0.193952487167626,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.35613120733451,0.325773918707152,0.329940245945071,1.32745138339963,1.21390318077491,2.11626489875326,1.50884063804718,0.590603785761546,1.22974059177571,0,0,0,0.316036757935816,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0,0.532020700926821,0.535106452806212,0.493647061806363,0,0,0,0,0.16488625294148,0,0.422190474497091,0.716234064018819,0.820704498725306,1.1659233465194,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0,0,1.90934123603023,0.790839983952838,0.813277868507395,0.648032044930808,0.418176592028937,0.218362563746178,0.269728692769641,0.41326727862668,0.523511883968059,0.388844919875379,0.621339313086926,0,0.149516546043979,0.165458490457098,0.388902376688095,0.516639293910924,0.168956125490778,0,0.13020438484395,0.104859344425711,0,0,0,0.202725215290164,0.308132871494482,0.129920822977795,0,0,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0,0.680191150845634,0,0,0,0,0,0.549454872801795,12.862102744744,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.729320151204882,0.209613162627982,0.551530525350042,0,0.412070114477788,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.229741875822453,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0,0.290692833264657,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0.409231043169689,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0.480446541314382,5.58360652222978,7.27998783023258,0.30246421130683,0,5.20425742926858,9.1108929832255,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.425216450755349,0,0,5.75972722056264,3.67054849707472,8.03924749761028,3.4460959692726,8.40337807474967,0.570070258369122,0.504060259519861,4.6563407237614,0,0,0,1.44425809875637,5.15327400611326,3.26670970019791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0.122490799214954,0,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,2.11265129665021,0,0,0,0.216491041011214,0,0,0.22836775943812,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0,0.209446706813455,1.27728527604296,0,0,0,0,0,0.125654352112864,0.173824320192276,0,0,0,0,0,0,0,0,0,0,0,0.136072998302656,0,0,0,0,0.567318240503458,0.175951124163949,0.43839146485515,0.556094498451196,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.17340679996253,0.853153002140936,0.696710015581316,1.03093969057675,1.00841762311671,0.667134131534611,0.190225626112559,0.949058123089023,0.658795818896044,0.251335208800269,0.596869416123452,0.779856348476481,0,0.432276099749388,1.1948476395262,0.379335801906163,0.228497025219458,0,0,0.193952487167626,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.35613120733451,0.325773918707152,0.329940245945071,1.32745138339963,1.21390318077491,2.11626489875326,1.50884063804718,0.590603785761546,1.22974059177571,0,0,0,0.316036757935816,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0,0.532020700926821,0.535106452806212,0.493647061806363,0,0,0,0,0.16488625294148,0,0.422190474497091,0.716234064018819,0.820704498725306,1.1659233465194,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0,0,1.90934123603023,0.790839983952838,0.813277868507395,0.648032044930808,0.418176592028937,0.218362563746178,0.269728692769641,0.41326727862668,0.523511883968059,0.388844919875379,0.621339313086926,0,0.149516546043979,0.165458490457098,0.388902376688095,0.516639293910924,0.168956125490778,0,0.13020438484395,0.104859344425711,0,0,0,0.202725215290164,0.308132871494482,0.129920822977795,0,0,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0,0.680191150845634,0,0,0,0,0,0.549454872801795,12.862102744744,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.729320151204882,0.209613162627982,0.551530525350042,0,0.412070114477788,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.229741875822453,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0,0.290692833264657,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0.409231043169689,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr9:55278152..55278171,+ | |||
}} | }} |
Latest revision as of 08:19, 5 August 2015
Short description: | p@chr9:55278152..55278171, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:55278152..55278171, + |
Coexpression cluster: | MCL_coexpression_mm9:3710 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.03e-18 | 9 |
epithelial cell of alimentary canal | 2.03e-18 | 9 |
epithelial cell | 4.50e-15 | 25 |
columnar/cuboidal epithelial cell | 1.26e-12 | 7 |
M cell of gut | 1.84e-11 | 3 |
intestinal crypt stem cell | 1.02e-10 | 3 |
endo-epithelial cell | 1.12e-10 | 15 |
brush border epithelial cell | 6.51e-10 | 6 |
gut absorptive cell | 6.51e-10 | 6 |
enterocyte | 6.51e-10 | 6 |
endodermal cell | 9.02e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 8.20e-22 | 15 |
simple columnar epithelium | 3.03e-19 | 11 |
epithelium of mucosa | 2.03e-18 | 9 |
gastrointestinal system epithelium | 2.03e-18 | 9 |
intestinal epithelium | 2.03e-18 | 9 |
intestine | 2.47e-18 | 31 |
intestinal mucosa | 3.22e-16 | 13 |
wall of intestine | 3.22e-16 | 13 |
gastrointestinal system mucosa | 3.22e-16 | 13 |
gastrointestinal system | 5.62e-13 | 47 |
organ component layer | 5.97e-13 | 24 |
gut-associated lymphoid tissue | 4.89e-08 | 2 |
mucosa-associated lymphoid tissue | 4.89e-08 | 2 |
lymphoid tissue | 4.89e-08 | 2 |