FFCP PHASE1:Hg19::chr10:115999510..115999521,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=340706 | |EntrezGene=340706 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=24709 | |HGNC=24709 | ||
|TSSclassifier=strong | |||
|UniProt=Q5GFL6 | |UniProt=Q5GFL6 | ||
|association_with_transcript=26bp_to_AK127756_5end | |association_with_transcript=26bp_to_AK127756_5end | ||
|cluster_id=chr10:115999510..115999521,+ | |||
|coexpression_cluster_id=C127 | |||
|description=CAGE_peak_5_at_VWA2_5end | |description=CAGE_peak_5_at_VWA2_5end | ||
|id=chr10:115999510..115999521,+ | |id=chr10:115999510..115999521,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.27e-34;1!UBERON:0008801;8.34e-34;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;2.18e-34;1!DOID:1357;2.18e-34;1!DOID:5409;1.17e-09;4!DOID:0050615;2.45e-09;16 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.84e-34,1;DOID:1357,1.84e-34,1;DOID:5409,1.22e-09,4;DOID:0050615,2.45e-09,16 | |||
|ontology_enrichment_uberon=UBERON:0004921!1.94e-08!129;UBERON:0004185!1.94e-08!129;UBERON:0001007!1.31e-07!155;UBERON:0001555!1.31e-07!155;UBERON:0007026!1.31e-07!155;UBERON:0004119!3.24e-07!169;UBERON:0000925!3.24e-07!169;UBERON:0006595!3.24e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;2.18e-34;1!UBERON:0001825;2.18e-34;1!UBERON:0007029;8.34e-34;1!UBERON:0001831;8.34e-34;1!UBERON:0001567;8.34e-34;1!UBERON:0001829;1.17e-17;2!UBERON:0004089;1.17e-17;2!UBERON:0001041;2.08e-10;14!UBERON:0000014;1.63e-09;4!UBERON:0000945;6.34e-08;5!UBERON:0010039;6.34e-08;5!UBERON:0001044;9.23e-07;6!UBERON:0003293;9.23e-07;6!UBERON:0003294;9.23e-07;6!UBERON:0010047;9.23e-07;6!UBERON:0003408;9.23e-07;6!UBERON:0000167;9.23e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,1.84e-34,1;UBERON:0001825,1.84e-34,1;UBERON:0007029,7.06e-34,1;UBERON:0001831,9.85e-34,1;UBERON:0001567,9.85e-34,1;UBERON:0008801,9.85e-34,1;UBERON:0001829,1.27e-17,2;UBERON:0004089,1.27e-17,2;UBERON:0000014,1.57e-09,4;UBERON:0001044,9.49e-07,6;UBERON:0003293,9.49e-07,6;UBERON:0003294,9.49e-07,6;UBERON:0010047,9.49e-07,6;UBERON:0000167,9.49e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0,0,0.144090417154106,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0.83088067605837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,4.39751469500656,0,0,0.250381861413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,0.546974809018219,1.09651553371436,0.496211178389294,0,0.127762427639595,0,0,0,0.227662191351298,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,1.45713297917742,0,0.795803100645473,0,4.17900503544152,0,0.452888530700021,0.0771741581079447,0,0,0,0,0,0,0.8453114551668,0,0,0,0,0,0,0,2.19100916473955,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.535928260312357,0,0,0,0.476128862927481,0,0.0620747142958579,0,0,0,0.217716747896961,0,0.0673520530145875,0.286888821570705,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0,0,0.144090417154106,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0.83088067605837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,4.39751469500656,0,0,0.250381861413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,0.546974809018219,1.09651553371436,0.496211178389294,0,0.127762427639595,0,0,0,0.227662191351298,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,1.45713297917742,0,0.795803100645473,0,4.17900503544152,0,0.452888530700021,0.0771741581079447,0,0,0,0,0,0,0.8453114551668,0,0,0,0,0,0,0,2.19100916473955,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.535928260312357,0,0,0,0.476128862927481,0,0.0620747142958579,0,0,0,0.217716747896961,0,0.0673520530145875,0.286888821570705,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p5@VWA2 | |short_description=p5@VWA2 | ||
}} | }} |
Latest revision as of 12:31, 16 September 2015
Short description: | p5@VWA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_VWA2_5end |
Coexpression cluster: | C127_maxillary_small_hepatoblastoma_hepatocellular_alveolar_colon_argyrophil |
Association with transcript: | 26bp_to_AK127756_5end |
EntrezGene: | VWA2 |
HGNC: | 24709 |
UniProt: | Q5GFL6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 1.84e-34 | 1 |
paranasal sinus | 1.84e-34 | 1 |
surface | 7.06e-34 | 1 |
parotid gland | 9.85e-34 | 1 |
cheek | 9.85e-34 | 1 |
parotid gland primordium | 9.85e-34 | 1 |
major salivary gland | 1.27e-17 | 2 |
midface | 1.27e-17 | 2 |
zone of skin | 1.57e-09 | 4 |
saliva-secreting gland | 9.49e-07 | 6 |
gland of oral region | 9.49e-07 | 6 |
gland of foregut | 9.49e-07 | 6 |
oral gland | 9.49e-07 | 6 |
oral cavity | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.84e-34 | 1 |
maxillary sinus cancer | 1.84e-34 | 1 |
lung small cell carcinoma | 1.22e-09 | 4 |
respiratory system cancer | 2.45e-09 | 16 |