FFCP PHASE1:Mm9::chr13:74908074..74908117,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12380 | |EntrezGene=12380 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2872 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CE04,Q8C281,Q921U7 | |UniProt=Q8CE04,Q8C281,Q921U7 | ||
|association_with_transcript=0bp_to_ENSMUST00000163477,uc007rfn.1,uc007rfo.1,uc011zbx.1_5end | |association_with_transcript=0bp_to_ENSMUST00000163477,uc007rfn.1,uc007rfo.1,uc011zbx.1_5end | ||
|cluster_id=chr13:74908074..74908117,- | |||
|description=CAGE_peak_3_at_Cast_5end | |description=CAGE_peak_3_at_Cast_5end | ||
|id=chr13:74908074..74908117,- | |id=chr13:74908074..74908117,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!6.43e-11!47;UBERON:0000926!2.68e-10!193;UBERON:0004120!2.68e-10!193;UBERON:0006603!2.68e-10!193;UBERON:0004119!5.36e-09!130;UBERON:0000925!5.36e-09!130;UBERON:0006595!5.36e-09!130;UBERON:0004921!1.12e-08!126;UBERON:0004185!1.12e-08!126;UBERON:0003104!1.23e-08!131;UBERON:0009142!1.23e-08!131;UBERON:0001007!1.46e-08!128;UBERON:0001555!1.46e-08!128;UBERON:0007026!1.46e-08!128;UBERON:0000077!3.69e-08!97;UBERON:0004872!1.33e-07!33;UBERON:0001041!4.05e-07!92;UBERON:0009569!4.54e-07!66;UBERON:0002107!4.82e-07!22;UBERON:0007499!4.82e-07!22;UBERON:0006925!4.82e-07!22;UBERON:0009497!4.82e-07!22;UBERON:0000015!4.82e-07!22;UBERON:0002423!4.82e-07!22;UBERON:0006235!4.82e-07!22;UBERON:0008835!4.82e-07!22;UBERON:0003894!4.82e-07!22;UBERON:0004161!4.82e-07!22;UBERON:0008836!4.82e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.80e-11,118;UBERON:0000925,1.80e-11,118;UBERON:0006595,1.80e-11,118;UBERON:0004921,3.80e-11,114;UBERON:0001007,5.52e-11,116;UBERON:0001555,5.52e-11,116;UBERON:0007026,5.52e-11,116;UBERON:0003914,6.39e-11,47;UBERON:0001041,7.67e-10,80;UBERON:0004872,1.33e-07,33;UBERON:0001048,4.05e-07,134;UBERON:0009569,4.52e-07,66;UBERON:0002107,4.80e-07,22;UBERON:0007499,4.80e-07,22;UBERON:0006925,4.80e-07,22;UBERON:0009497,4.80e-07,22;UBERON:0000015,4.80e-07,22;UBERON:0002423,4.80e-07,22;UBERON:0006235,4.80e-07,22;UBERON:0008835,4.80e-07,22;UBERON:0003894,4.80e-07,22;UBERON:0004161,4.80e-07,22;UBERON:0008836,4.80e-07,22 | |||
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| ||
|short_description=p3@Cast | |short_description=p3@Cast | ||
}} | }} |
Latest revision as of 22:34, 1 October 2015
Short description: | p3@Cast |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cast_5end |
Coexpression cluster: | MCL_coexpression_mm9:2872 |
Association with transcript: | 0bp_to_ENSMUST00000163477, uc007rfn.1, uc007rfo.1, uc011zbx.1_5end |
EntrezGene: | Cast |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.80e-11 | 118 |
endoderm | 1.80e-11 | 118 |
presumptive endoderm | 1.80e-11 | 118 |
subdivision of digestive tract | 3.80e-11 | 114 |
digestive system | 5.52e-11 | 116 |
digestive tract | 5.52e-11 | 116 |
primitive gut | 5.52e-11 | 116 |
epithelial tube | 6.39e-11 | 47 |
foregut | 7.67e-10 | 80 |
splanchnic layer of lateral plate mesoderm | 1.33e-07 | 33 |
primordium | 4.05e-07 | 134 |
subdivision of trunk | 4.52e-07 | 66 |
liver | 4.80e-07 | 22 |
epithelial sac | 4.80e-07 | 22 |
digestive gland | 4.80e-07 | 22 |
epithelium of foregut-midgut junction | 4.80e-07 | 22 |
anatomical boundary | 4.80e-07 | 22 |
hepatobiliary system | 4.80e-07 | 22 |
foregut-midgut junction | 4.80e-07 | 22 |
hepatic diverticulum | 4.80e-07 | 22 |
liver primordium | 4.80e-07 | 22 |
septum transversum | 4.80e-07 | 22 |
liver bud | 4.80e-07 | 22 |