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FFCP PHASE1:Hg19::chr10:129691154..129691185,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=119467
|EntrezGene=119467
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=20795
|HGNC=20795
|TSSclassifier=strong
|UniProt=Q8NCR9
|UniProt=Q8NCR9
|association_with_transcript=25bp_to_ENST00000368671,NM_152311,uc001lka.1_5end
|association_with_transcript=25bp_to_ENST00000368671,NM_152311,uc001lka.1_5end
|cluster_id=chr10:129691154..129691185,-
|coexpression_cluster_id=C25
|description=CAGE_peak_2_at_CLRN3_5end
|description=CAGE_peak_2_at_CLRN3_5end
|id=chr10:129691154..129691185,-
|id=chr10:129691154..129691185,-
|ontology_enrichment_celltype=CL:0000181!3.77e-11!12;CL:0000417!3.77e-11!12;CL:0000668!3.77e-11!12;CL:0000414!3.77e-11!12;CL:0000412!3.77e-11!12;CL:0000182!3.77e-11!12;CL:0002178!5.85e-08!3;CL:0000223!2.27e-07!59
|ontology_enrichment_celltype=CL:0000181!3.77e-11!12;CL:0000417!3.77e-11!12;CL:0000668!3.77e-11!12;CL:0000414!3.77e-11!12;CL:0000412!3.77e-11!12;CL:0000182!3.77e-11!12;CL:0002178!5.85e-08!3;CL:0000223!2.27e-07!59
|ontology_enrichment_celltype_v019=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_development_v019=UBERON:0001045;6.33e-10;1!UBERON:0006242;6.33e-10;1!UBERON:0004161;1.43e-07;11!UBERON:0003104;8.09e-07;31
|ontology_enrichment_disease=DOID:3493!9.06e-12!2
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!1.53e-23!35;UBERON:0000160!2.51e-22!27;UBERON:0000059!6.52e-18!11;UBERON:0004921!4.54e-14!129;UBERON:0004185!4.54e-14!129;UBERON:0001007!2.72e-12!155;UBERON:0001555!2.72e-12!155;UBERON:0007026!2.72e-12!155;UBERON:0004119!4.21e-12!169;UBERON:0000925!4.21e-12!169;UBERON:0006595!4.21e-12!169;UBERON:0009854!8.96e-11!23;UBERON:0001155!2.03e-10!9;UBERON:0004907!2.10e-10!5;UBERON:0009497!7.58e-10!25;UBERON:0000015!7.58e-10!25;UBERON:0002423!7.58e-10!25;UBERON:0006235!7.58e-10!25;UBERON:0004161!7.58e-10!25;UBERON:0002107!8.65e-10!19;UBERON:0006925!8.65e-10!19;UBERON:0008836!8.65e-10!19;UBERON:0009856!1.99e-09!26;UBERON:0008835!2.24e-08!22;UBERON:0003894!2.24e-08!22;UBERON:0005172!4.38e-08!55;UBERON:0005173!4.38e-08!55;UBERON:0007499!2.66e-07!25;UBERON:0000077!3.32e-07!130;UBERON:0002417!4.04e-07!61;UBERON:0000916!4.04e-07!61;UBERON:0005057!5.36e-07!26;UBERON:0001154!6.24e-07!1;UBERON:0001153!6.24e-07!1
|ontology_enrichment_uberon_v019=UBERON:0000160;2.09e-38;17!UBERON:0005409;8.44e-30;22!UBERON:0000059;6.56e-20;11!UBERON:0004921;3.33e-17;33!UBERON:0002108;7.30e-17;4!UBERON:0001155;5.15e-16;9!UBERON:0001154;6.33e-10;1!UBERON:0001153;6.33e-10;1!UBERON:0009854;6.33e-10;1!UBERON:0001007;1.30e-08;81!UBERON:0004907;8.61e-08;5
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.19e-38,17;UBERON:0005409,3.29e-26,25;UBERON:0000059,7.10e-20,11;UBERON:0002108,6.92e-17,4;UBERON:0001155,4.77e-16,9;UBERON:0004921,3.32e-10,118;UBERON:0001154,5.30e-10,1;UBERON:0001153,5.30e-10,1;UBERON:0001045,5.30e-10,1;UBERON:0001007,2.53e-09,145;UBERON:0001555,2.53e-09,145;UBERON:0007026,2.53e-09,145;UBERON:0004119,3.14e-08,160;UBERON:0000925,3.14e-08,160;UBERON:0006595,3.14e-08,160;UBERON:0004907,9.23e-08,5
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|short_description=p2@CLRN3
|short_description=p2@CLRN3
}}
}}

Latest revision as of 01:20, 17 September 2015

Short description:p2@CLRN3
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_2_at_CLRN3_5end
Coexpression cluster:C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall
Association with transcript: 25bp_to_ENST00000368671, NM_152311, uc001lka.1_5end
EntrezGene:CLRN3
HGNC: 20795
UniProt: Q8NCR9
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data