FFCP PHASE1:Hg19::chr10:4822941..4822949,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:4822941..4822949,- | |||
|coexpression_cluster_id=C391 | |||
|description=CAGE_peak_at_chr10:4822941..4822949,- | |description=CAGE_peak_at_chr10:4822941..4822949,- | ||
|id=chr10:4822941..4822949,- | |id=chr10:4822941..4822949,- | ||
|ontology_enrichment_celltype=CL:0002144!3.88e-25!3;CL:0002139!2.19e-20!24;CL:0000071!1.51e-15!18;CL:0002546!1.51e-15!18;CL:0000115!1.18e-13!35;CL:0002618!2.44e-11!3;CL:0002078!1.21e-10!44;CL:1000306!9.25e-09!4;CL:0002547!9.25e-09!4;CL:0000213!5.65e-08!57;CL:0000215!5.65e-08!57 | |ontology_enrichment_celltype=CL:0002144!3.88e-25!3;CL:0002139!2.19e-20!24;CL:0000071!1.51e-15!18;CL:0002546!1.51e-15!18;CL:0000115!1.18e-13!35;CL:0002618!2.44e-11!3;CL:0002078!1.21e-10!44;CL:1000306!9.25e-09!4;CL:0002547!9.25e-09!4;CL:0000213!5.65e-08!57;CL:0000215!5.65e-08!57 | ||
|ontology_enrichment_celltype_v019=CL:0002593;4.52e-50;2!CL:0002595;5.15e-21;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,4.52e-50,2;CL:0002595,5.15e-21,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4556;4.27e-34;3!DOID:3908;4.21e-21;5!DOID:3905;2.19e-12;9!DOID:1324;5.55e-08;15!DOID:0050615;1.45e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,4.27e-34,3;DOID:3908,4.21e-21,5;DOID:3905,2.19e-12,9;DOID:1324,5.55e-08,15;DOID:0050615,1.45e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0001915!3.88e-25!3;UBERON:0001982!3.88e-25!3;UBERON:0000055!2.00e-17!69;UBERON:0001986!1.51e-15!18;UBERON:0004638!1.51e-15!18;UBERON:0004852!1.51e-15!18;UBERON:0002049!6.26e-15!79;UBERON:0007798!6.26e-15!79;UBERON:0001981!2.33e-14!60;UBERON:0007500!2.33e-14!60;UBERON:0004537!2.33e-14!60;UBERON:0006965!2.33e-14!60;UBERON:0000487!1.22e-12!22;UBERON:0006914!4.57e-11!25;UBERON:0004535!4.50e-10!110;UBERON:0001009!9.58e-10!113;UBERON:0004872!9.87e-10!84;UBERON:0000947!1.99e-09!21;UBERON:0010191!1.99e-09!21;UBERON:0000415!9.25e-09!4;UBERON:0007240!9.25e-09!4;UBERON:0005742!9.25e-09!4;UBERON:0005734!9.25e-09!4;UBERON:0004664!9.25e-09!4;UBERON:0004663!9.25e-09!4;UBERON:0004573!2.33e-08!33;UBERON:0004571!2.33e-08!33;UBERON:0002066!3.79e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;4.52e-50;2!UBERON:0003834;5.15e-21;5!UBERON:0001533;5.15e-21;5!UBERON:0003513;1.91e-15;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,4.52e-50,2;UBERON:0003834,5.15e-21,5;UBERON:0001533,5.15e-21,5;UBERON:0003513,1.91e-15,7;UBERON:0000915,6.99e-09,52 | |||
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|short_description=p@chr10:4822941..4822949,- | |short_description=p@chr10:4822941..4822949,- | ||
}} | }} |
Latest revision as of 13:53, 23 July 2015
Short description: | p@chr10:4822941..4822949, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:4822941..4822949, - |
Coexpression cluster: | C391_large_bronchioalveolar_fibrosarcoma_lung_pancreatic_giant_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 4.52e-50 | 2 |
smooth muscle cell of the subclavian artery | 5.15e-21 | 5 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 4.52e-50 | 2 |
thoracic segment blood vessel | 5.15e-21 | 5 |
subclavian artery | 5.15e-21 | 5 |
trunk blood vessel | 1.91e-15 | 7 |
thoracic segment of trunk | 6.99e-09 | 52 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 4.27e-34 | 3 |
non-small cell lung carcinoma | 4.21e-21 | 5 |
lung carcinoma | 2.19e-12 | 9 |
lung cancer | 5.55e-08 | 15 |
respiratory system cancer | 1.45e-07 | 16 |