FFCP PHASE1:Mm9::chr15:5446195..5446218,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=598 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-47bp_to_uc007vda.1,uc011zra.1_5end | |association_with_transcript=-47bp_to_uc007vda.1,uc011zra.1_5end | ||
|cluster_id=chr15:5446195..5446218,+ | |||
|description=CAGE_peak_1_at_uc007vda.1_5end,CAGE_peak_1_at_uc011zra.1_5end | |description=CAGE_peak_1_at_uc007vda.1_5end,CAGE_peak_1_at_uc011zra.1_5end | ||
|id=chr15:5446195..5446218,+ | |id=chr15:5446195..5446218,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,2.90e-14,2;CL:0002194,1.43e-07,4;CL:0000766,1.43e-07,4;CL:0000234,1.43e-07,4;CL:0000576,1.43e-07,4;CL:0000235,1.43e-07,4;CL:0000864,1.43e-07,4;CL:0002009,1.43e-07,4;CL:0000040,1.43e-07,4;CL:0000559,1.43e-07,4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005153!1.80e-09!17;UBERON:0002048!8.55e-09!14;UBERON:0000117!8.55e-09!14;UBERON:0000171!8.55e-09!14;UBERON:0000170!8.55e-09!14;UBERON:0005597!8.55e-09!14;UBERON:0000118!8.55e-09!14;UBERON:0002193!4.74e-08!48;UBERON:0002390!5.00e-08!45;UBERON:0003061!5.00e-08!45;UBERON:0001004!8.67e-08!42;UBERON:0000065!3.35e-07!41;UBERON:0000926!6.76e-07!193;UBERON:0004120!6.76e-07!193;UBERON:0006603!6.76e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005153,2.82e-09,17;UBERON:0000029,4.65e-08,1;UBERON:0001097,4.65e-08,1;UBERON:0003968,4.65e-08,1;UBERON:0001467,4.65e-08,1;UBERON:0005157,7.15e-08,20;UBERON:0002048,1.47e-07,14;UBERON:0000117,1.47e-07,14;UBERON:0000171,1.47e-07,14;UBERON:0000170,1.47e-07,14;UBERON:0005597,1.47e-07,14;UBERON:0000118,1.47e-07,14;UBERON:0000993,2.74e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0.0797721589953364,0,0,0,0.202475267389826,0,0.473193248037357,0.822686601634433,0.84877930359606,0.255129870453209,0.198581902401771,1.56719873483361,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0,1.0470474879476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,6.73238497482646,1.92974780784272,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0.484875253135222,0,0,0,0.255457055208591,0.239630249011841,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0.568326998791185,0,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0,0.878200461164203,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0,0.251335208800269,0,0,1.79763881730844,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0.627994911365499,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0,0.624075346229121,0,0,0,1.47802552133284,0,0,0.169745085775188,0.234690248288502,0.167506257441816,0.476087281772027,0.390267295715598,0.788175720530955,0.664394068946325,0.478364305972461,2.45794972073607,2.59027472798843,2.89298117163023,4.52373851817817,4.89515115436839,1.47529281905711,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,1.15479086080775,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0.712994756769443,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0.0603129249281559,0.238744688006273,0.164140899745061,0,0,0.341741761595705,0,0.555583582109135,0.376736914009382,0.956859594047176,1.83022538565218,0,0,0.138199973804424,0.954670618015114,0,0,0.108005340821801,0,0,0,0.165306911450672,0.785267825952089,0.259229946583586,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0.632022241256357,0,0.102710957164827,0,0,0,0.240390899039938,0,0.403865799792591,0.228620419965,0.201652370273681,0.487289403698762,0.673482891482306,0.350630706544707,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0.549454872801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0.385813221962283,0,0,0,0,0.220591419119515,0.463735671240843 | |phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0.0797721589953364,0,0,0,0.202475267389826,0,0.473193248037357,0.822686601634433,0.84877930359606,0.255129870453209,0.198581902401771,1.56719873483361,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0,1.0470474879476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,6.73238497482646,1.92974780784272,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0.484875253135222,0,0,0,0.255457055208591,0.239630249011841,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0.568326998791185,0,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0,0.878200461164203,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0,0.251335208800269,0,0,1.79763881730844,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0.627994911365499,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0,0.624075346229121,0,0,0,1.47802552133284,0,0,0.169745085775188,0.234690248288502,0.167506257441816,0.476087281772027,0.390267295715598,0.788175720530955,0.664394068946325,0.478364305972461,2.45794972073607,2.59027472798843,2.89298117163023,4.52373851817817,4.89515115436839,1.47529281905711,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,1.15479086080775,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0.712994756769443,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0.0603129249281559,0.238744688006273,0.164140899745061,0,0,0.341741761595705,0,0.555583582109135,0.376736914009382,0.956859594047176,1.83022538565218,0,0,0.138199973804424,0.954670618015114,0,0,0.108005340821801,0,0,0,0.165306911450672,0.785267825952089,0.259229946583586,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0.632022241256357,0,0.102710957164827,0,0,0,0.240390899039938,0,0.403865799792591,0.228620419965,0.201652370273681,0.487289403698762,0.673482891482306,0.350630706544707,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0.549454872801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0.385813221962283,0,0,0,0,0.220591419119515,0.463735671240843 | ||
|short_description=p1@uc007vda.1,p1@uc011zra.1 | |short_description=p1@uc007vda.1,p1@uc011zra.1 | ||
}} | }} |
Latest revision as of 07:27, 5 August 2015
Short description: | p1@uc007vda.1, p1@uc011zra.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc007vda.1_5end, CAGE_peak_1_at_uc011zra.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:598 |
Association with transcript: | -47bp_to_uc007vda.1, uc011zra.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 2.90e-14 | 2 |
monopoietic cell | 1.43e-07 | 4 |
myeloid leukocyte | 1.43e-07 | 4 |
phagocyte | 1.43e-07 | 4 |
monocyte | 1.43e-07 | 4 |
macrophage | 1.43e-07 | 4 |
tissue-resident macrophage | 1.43e-07 | 4 |
macrophage dendritic cell progenitor | 1.43e-07 | 4 |
monoblast | 1.43e-07 | 4 |
promonocyte | 1.43e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
epithelial bud | 2.82e-09 | 17 |
lymph node | 4.65e-08 | 1 |
axillary lymph node | 4.65e-08 | 1 |
peripheral lymph node | 4.65e-08 | 1 |
shoulder | 4.65e-08 | 1 |
epithelial fold | 7.15e-08 | 20 |
lung | 1.47e-07 | 14 |
respiratory tube | 1.47e-07 | 14 |
respiration organ | 1.47e-07 | 14 |
pair of lungs | 1.47e-07 | 14 |
lung primordium | 1.47e-07 | 14 |
lung bud | 1.47e-07 | 14 |
oviduct | 2.74e-07 | 1 |