FFCP PHASE1:Mm9::chr15:66774675..66774698,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2992 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:66774675..66774698,- | |||
|description=CAGE_peak_at_chr15:66774675..66774698,- | |description=CAGE_peak_at_chr15:66774675..66774698,- | ||
|id=chr15:66774675..66774698,- | |id=chr15:66774675..66774698,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,3.22e-18,6;CL:0000126,3.22e-18,6;CL:0000127,3.22e-18,6;CL:0002453,1.30e-13,8;CL:0002614,2.04e-12,3;CL:0000333,7.65e-11,10;CL:0000095,7.65e-11,10;CL:0000243,7.65e-11,10;CL:0000123,7.65e-11,10;CL:0000125,7.65e-11,10;CL:0000030,7.65e-11,10;CL:0000339,7.65e-11,10;CL:0002605,5.74e-10,2;CL:0002604,5.74e-10,2;CL:0002603,1.52e-09,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,2.04e-12,3;UBERON:0009663,2.04e-12,3;UBERON:0009661,2.04e-12,3;UBERON:0000125,2.04e-12,3;UBERON:0002308,2.04e-12,3;UBERON:0002950,1.93e-09,4;UBERON:0001891,1.93e-09,4;UBERON:0009616,1.93e-09,4;UBERON:0010286,1.93e-09,4;UBERON:0001911,5.17e-09,2;UBERON:0000076,5.17e-09,2;UBERON:0005333,5.17e-09,2;UBERON:0008425,5.17e-09,2;UBERON:0005311,5.17e-09,2 | |||
|phase1_expression=0,0,0.454999239389536,0.30246421130683,0.500895729946347,0.33575854382378,0,0,0.422366166455,0.936258105287974,0.513653904676515,0.239316476986009,0,0.0874204024189974,0.333109761815663,0,0,0,0,0.42438965179803,1.27564935226605,0,0,0.159992422793407,0.22940928106717,0,0,0.646413698057667,0.380046838912748,0.504060259519861,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0.971020706062307,0.251793635951155,0.304130793658544,0,2.34717403304412,1.74420125104357,4.61340983742391,9.91592485278845,0.979904951377538,2.87505128729943,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0.677689064138264,0,0.449949858640699,0,0,0.898800331555214,0,0.311068836925433,1.35005938331691,0.630974884054146,0.285650984403804,0,0,0.0958454710182364,0,0,0.766124028511126,0.768032666281217,0,0.182975287204819,0,1.11673199600552,2.8138130501584,1.06958773443767,0.294628585473668,0,0,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0.505524445014783,0.45673551887624,0,0.445326417194474,0,0,0,0.150722640552623,0.23517741427141,0,1.48316980640624,0,0,0,0.220841518460394,0,0,0.292780797011547,0,0,0.958520996047362,0,0.127070227073065,0,0,0,0.173824320192276,0,0,0.324482526135515,0.305518091550949,0.124406970610093,0,0,0,0,0.180062129805349,0.30140963567143,0,0.512454881139399,0.562210347358373,0,0,0,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0,0.465067889500816,0,0,0,0,0,0.292399974850665,0.219550115291051,0,0.210289948564127,0,0,0.264450566663544,0,0,0.644337306610467,1.21010114774006,1.33426826306922,1.52180500890047,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0.210407459670956,0.442655759869801,1.03327103585722,1.56998727841375,3.82531208157582,0,0,0.196558995113203,0,0,0,0,1.15078454980324,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0.491589944147214,0,0,1.50791283939272,0,1.47529281905711,1.37968373152366,0.160550589987792,0.234423373184406,0,0,0,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0.404810701674894,0.584511715822624,0,0,0,0.178065603667255,0,0,0,0,0,0,0.885905678642318,0.614870295887855,0,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0.608929898229199,0.23467170806371,0.63549621259146,0,0,0,0.0603129249281559,0.119372344003136,0,0.582961673259701,0.556275906031529,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.609958401380546,0.216010681643603,0.836353184057875,0.87345025498471,0.269728692769641,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0.386379188064381,0.375364950902364,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0.103787347584177,0,0,0,0.209613162627982,0.367687016900028,0.44449345560323,0.618105171716683,0.320919209591815,0.252697211763798,0.25347929989024,0,0.280924522409647,0.256100609619477,0.114870937911227,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0.593175090620871,0,0.409231043169689,0,0.192906610981141,0.249810577937946,0,0,0.191288332068843,0,0 | |phase1_expression=0,0,0.454999239389536,0.30246421130683,0.500895729946347,0.33575854382378,0,0,0.422366166455,0.936258105287974,0.513653904676515,0.239316476986009,0,0.0874204024189974,0.333109761815663,0,0,0,0,0.42438965179803,1.27564935226605,0,0,0.159992422793407,0.22940928106717,0,0,0.646413698057667,0.380046838912748,0.504060259519861,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0.971020706062307,0.251793635951155,0.304130793658544,0,2.34717403304412,1.74420125104357,4.61340983742391,9.91592485278845,0.979904951377538,2.87505128729943,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0.677689064138264,0,0.449949858640699,0,0,0.898800331555214,0,0.311068836925433,1.35005938331691,0.630974884054146,0.285650984403804,0,0,0.0958454710182364,0,0,0.766124028511126,0.768032666281217,0,0.182975287204819,0,1.11673199600552,2.8138130501584,1.06958773443767,0.294628585473668,0,0,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0.505524445014783,0.45673551887624,0,0.445326417194474,0,0,0,0.150722640552623,0.23517741427141,0,1.48316980640624,0,0,0,0.220841518460394,0,0,0.292780797011547,0,0,0.958520996047362,0,0.127070227073065,0,0,0,0.173824320192276,0,0,0.324482526135515,0.305518091550949,0.124406970610093,0,0,0,0,0.180062129805349,0.30140963567143,0,0.512454881139399,0.562210347358373,0,0,0,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0,0.465067889500816,0,0,0,0,0,0.292399974850665,0.219550115291051,0,0.210289948564127,0,0,0.264450566663544,0,0,0.644337306610467,1.21010114774006,1.33426826306922,1.52180500890047,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0.210407459670956,0.442655759869801,1.03327103585722,1.56998727841375,3.82531208157582,0,0,0.196558995113203,0,0,0,0,1.15078454980324,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0.491589944147214,0,0,1.50791283939272,0,1.47529281905711,1.37968373152366,0.160550589987792,0.234423373184406,0,0,0,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0.404810701674894,0.584511715822624,0,0,0,0.178065603667255,0,0,0,0,0,0,0.885905678642318,0.614870295887855,0,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0.608929898229199,0.23467170806371,0.63549621259146,0,0,0,0.0603129249281559,0.119372344003136,0,0.582961673259701,0.556275906031529,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.609958401380546,0.216010681643603,0.836353184057875,0.87345025498471,0.269728692769641,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0.386379188064381,0.375364950902364,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0.103787347584177,0,0,0,0.209613162627982,0.367687016900028,0.44449345560323,0.618105171716683,0.320919209591815,0.252697211763798,0.25347929989024,0,0.280924522409647,0.256100609619477,0.114870937911227,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0.593175090620871,0,0.409231043169689,0,0.192906610981141,0.249810577937946,0,0,0.191288332068843,0,0 | ||
|short_description=p@chr15:66774675..66774698,- | |short_description=p@chr15:66774675..66774698,- | ||
}} | }} |
Latest revision as of 09:52, 5 August 2015
Short description: | p@chr15:66774675..66774698, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:66774675..66774698, - |
Coexpression cluster: | MCL_coexpression_mm9:2992 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 3.22e-18 | 6 |
macroglial cell | 3.22e-18 | 6 |
astrocyte | 3.22e-18 | 6 |
oligodendrocyte precursor cell | 1.30e-13 | 8 |
neuron of the substantia nigra | 2.04e-12 | 3 |
migratory neural crest cell | 7.65e-11 | 10 |
neuron associated cell | 7.65e-11 | 10 |
glial cell (sensu Vertebrata) | 7.65e-11 | 10 |
neuron associated cell (sensu Vertebrata) | 7.65e-11 | 10 |
glial cell | 7.65e-11 | 10 |
glioblast | 7.65e-11 | 10 |
glioblast (sensu Vertebrata) | 7.65e-11 | 10 |
astrocyte of the cerebral cortex | 5.74e-10 | 2 |
astrocyte of the hippocampus | 5.74e-10 | 2 |
astrocyte of the cerebellum | 1.52e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 2.04e-12 | 3 |
telencephalic nucleus | 2.04e-12 | 3 |
midbrain nucleus | 2.04e-12 | 3 |
neural nucleus | 2.04e-12 | 3 |
nucleus of brain | 2.04e-12 | 3 |
regional part of midbrain | 1.93e-09 | 4 |
midbrain | 1.93e-09 | 4 |
presumptive midbrain | 1.93e-09 | 4 |
midbrain neural tube | 1.93e-09 | 4 |
mammary gland | 5.17e-09 | 2 |
external ectoderm | 5.17e-09 | 2 |
mammary bud | 5.17e-09 | 2 |
mammary ridge | 5.17e-09 | 2 |
mammary placode | 5.17e-09 | 2 |