FFCP PHASE1:Mm9::chr11:59918473..59918515,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19377 | |EntrezGene=19377 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q61818,Q810L5 | |UniProt=Q61818,Q810L5 | ||
|association_with_transcript=0bp_to_ENSMUST00000064190,ENSMUST00000149770,NM_009021,uc007jfk.1,uc011xvq.1_5end | |association_with_transcript=0bp_to_ENSMUST00000064190,ENSMUST00000149770,NM_009021,uc007jfk.1,uc011xvq.1_5end | ||
|cluster_id=chr11:59918473..59918515,+ | |||
|description=CAGE_peak_4_at_Rai1_5end | |description=CAGE_peak_4_at_Rai1_5end | ||
|id=chr11:59918473..59918515,+ | |id=chr11:59918473..59918515,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!2.49e-07!23;UBERON:0000974!2.49e-07!23;UBERON:0004807!2.49e-07!23;UBERON:0005058!2.49e-07!23;UBERON:0003351!2.49e-07!23;UBERON:0009113!2.49e-07!23;UBERON:0003295!2.49e-07!23;UBERON:0009722!2.49e-07!23;UBERON:0005562!2.49e-07!23;UBERON:0007690!2.49e-07!23;UBERON:0003408!2.66e-07!24;UBERON:0000479!5.83e-07!349;UBERON:0001004!6.40e-07!42;UBERON:0000065!6.93e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,4.44e-08,43;UBERON:0002370,2.22e-07,23;UBERON:0000974,2.22e-07,23;UBERON:0004807,2.22e-07,23;UBERON:0005058,2.22e-07,23;UBERON:0003351,2.22e-07,23;UBERON:0009113,2.22e-07,23;UBERON:0003295,2.22e-07,23;UBERON:0009722,2.22e-07,23;UBERON:0005562,2.22e-07,23;UBERON:0007690,2.22e-07,23;UBERON:0003408,2.38e-07,24;UBERON:0001004,5.65e-07,42;UBERON:0000065,6.12e-07,41;UBERON:0000479,7.04e-07,349;UBERON:0006562,9.87e-07,24;UBERON:0001557,9.87e-07,24;UBERON:0001042,9.87e-07,24;UBERON:0008814,9.87e-07,24;UBERON:0009145,9.87e-07,24 | |||
|phase1_expression=3.04282809499109,2.09385244583617,0.909998478779072,2.41971369045464,1.50268718983904,2.18243053485457,4.43864017131499,5.03580961422147,7.60259099619,8.66038747391376,5.13653904676515,8.85470964848234,5.47842335779858,5.59490575481583,2.33176833270964,2.42970320867791,2.79824751251259,2.83915948822414,3.70208970735495,3.81950686618227,3.74190476664707,3.57447424323187,3.91799683708403,2.23989391910769,1.14704640533585,0,0,0.861884930743556,0.380046838912748,1.51218077855958,1.77384408524244,12.7006134691926,15.3766196896143,0,1.73310971850765,2.1610503896604,1.83752420636132,1.25559489221072,1.5626706890476,0,0,0,1.45653105909346,5.28766635497425,4.35920804243913,3.12029478674859,3.12956537739216,2.39827672018491,2.41654801007919,3.88859798148567,2.2397827460058,0,3.52343472721246,13.0565185562042,9.74672017513146,3.08711323243136,2.29226751951005,3.6097046459421,6.27181028664753,5.81890077199236,3.1691570175309,1.0165335962074,2.66788438833342,1.3498495759221,2.96659908770092,2.1314403448383,6.89080254192331,4.61061966385865,5.08079100311541,6.61529097825284,4.83747411108179,3.71346279724945,3.75476519617743,3.06226998037385,4.40889166683887,4.5960939330501,4.40463523997555,4.59674417106676,5.06901559745603,4.61602007055678,4.84884511092771,2.6045668527838,3.07101298901519,1.12552522006336,2.44477196442896,3.83017161115768,3.41692033917847,2.60959224155421,3.25622631332691,2.56943304363071,3.47837386442013,4.30211938490693,2.03991400112325,8.09554787456726,1.29955283489534,2.24013443548668,1.26399978118577,2.21559419351475,0.779358013808606,0.70667914902068,2.39433813620357,0,2.54805239706646,0,1.08245520505607,1.01343946190039,0,1.82694207550496,4.40194402200192,4.75014845007439,3.64319186208885,3.95805121805784,2.99800146432876,3.91878865436819,5.17390311397101,3.39299796590124,0.988779870937496,4.19338135067744,4.42305275974937,3.88240439873782,3.5334642953663,6.30337829075789,1.86391761218122,5.27005434620785,4.39838084308256,2.81002760729451,3.35482348616577,1.19980546198682,1.52484272487678,4.04434726393021,5.49000723382352,5.6544458450789,4.51943232499919,3.58001640262463,5.194701113989,2.92034273521964,4.27725328171328,5.349499736234,4.29628689337247,2.94618598241064,3.6433724029557,2.75882525320168,5.58192602396583,4.9732589885786,5.57899293040888,3.45907044769094,4.68508622798644,5.17406741478031,4.95806383745537,6.05139456537022,6.862093842394,6.35667624039967,7.22922847986555,6.61679116392116,5.55611768301447,4.37875387000685,0.702213187313235,1.54408744268829,2.84163499395593,3.93538967817454,6.0976775595085,5.04173772090842,5.68187365404505,5.1158700254325,4.78228049950873,4.65067889500816,3.75582761959467,3.15266424391358,2.63295759861569,3.77585167381919,4.86412857275134,3.36259971078264,2.41505126820156,2.41571553768669,3.99550902271842,5.9684675179985,0.991256348951394,1.32225283331772,5.97207101498655,6.0381534683714,6.95884291139304,5.84882221407693,4.00280478920767,3.42406127002606,2.84717436926707,2.47048432086016,2.76468729680296,4.17808591286417,4.28920991662064,1.79763881730844,1.94524244887225,2.58883655230677,3.60369011810855,3.77020091612105,7.88954149711563,5.09128319613286,3.87904974335251,3.71719845418688,3.73095569033118,2.36176236767363,1.72698600625512,2.83813477020141,1.77871576252289,4.83850806576673,4.12773889737726,2.69834534861824,1.82574109249653,4.3411888755435,1.01850340712568,4.31544206176216,3.08056930872567,1.09824565275233,4.31304619582064,3.34926852901653,4.05648975048929,2.77836765741823,1.4351793081753,3.37710464954357,4.43407656399851,4.35830247072115,4.88894929326078,5.7713329163564,7.04070744865506,7.03526281255626,4.28478553594825,5.07347484430277,7.25121662888479,5.75808193086815,7.97273843287435,5.57135270033509,2.76295970985433,3.61622646453779,3.01582567878545,0,4.42587845717133,6.34654516500885,2.88991061978026,3.98519734413491,2.62295912602681,1.00988370881749,3.78609863299508,4.29482618726302,4.95473814785438,6.69112634267146,5.12436950389506,5.94460714656548,7.2865926301481,2.63030272120181,4.34816555741176,5.46246237917072,3.83238230062325,6.05423052468668,5.53815661802159,7.09371528781903,5.30980553359851,5.34117399540959,3.32555912661226,3.77210159511796,3.54362271456927,3.3817866273832,4.65170927702798,3.99887102425256,3.20847640546249,2.52829406348653,5.27093042874994,2.06271086496374,1.70219802876894,3.42116078659489,4.13947788104814,3.00071849044229,3.72414490648775,2.49716344642899,2.46823530903181,3.34911444026059,2.58138878870081,1.69465656691056,2.42581237860458,5.44124634706884,4.03661066739764,5.12659861889325,2.74556391207214,2.79039529566604,4.66369338607761,5.7481843623258,2.05045056957423,4.95328483111734,3.51869602002452,1.69531611304222,4.10082683163076,3.20289442489132,2.54967644990783,2.37917468950219,1.93479963326193,0,3.79603192297362,5.28630614529807,5.40026704109006,6.89991376847747,3.71216358368502,4.72025212346872,4.95920734352016,2.87931536182433,1.8146096260851,4.34937519160848,0.56369293868419,3.5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| |phase1_expression=3.04282809499109,2.09385244583617,0.909998478779072,2.41971369045464,1.50268718983904,2.18243053485457,4.43864017131499,5.03580961422147,7.60259099619,8.66038747391376,5.13653904676515,8.85470964848234,5.47842335779858,5.59490575481583,2.33176833270964,2.42970320867791,2.79824751251259,2.83915948822414,3.70208970735495,3.81950686618227,3.74190476664707,3.57447424323187,3.91799683708403,2.23989391910769,1.14704640533585,0,0,0.861884930743556,0.380046838912748,1.51218077855958,1.77384408524244,12.7006134691926,15.3766196896143,0,1.73310971850765,2.1610503896604,1.83752420636132,1.25559489221072,1.5626706890476,0,0,0,1.45653105909346,5.28766635497425,4.35920804243913,3.12029478674859,3.12956537739216,2.39827672018491,2.41654801007919,3.88859798148567,2.2397827460058,0,3.52343472721246,13.0565185562042,9.74672017513146,3.08711323243136,2.29226751951005,3.6097046459421,6.27181028664753,5.81890077199236,3.1691570175309,1.0165335962074,2.66788438833342,1.3498495759221,2.96659908770092,2.1314403448383,6.89080254192331,4.61061966385865,5.08079100311541,6.61529097825284,4.83747411108179,3.71346279724945,3.75476519617743,3.06226998037385,4.40889166683887,4.5960939330501,4.40463523997555,4.59674417106676,5.06901559745603,4.61602007055678,4.84884511092771,2.6045668527838,3.07101298901519,1.12552522006336,2.44477196442896,3.83017161115768,3.41692033917847,2.60959224155421,3.25622631332691,2.56943304363071,3.47837386442013,4.30211938490693,2.03991400112325,8.09554787456726,1.29955283489534,2.24013443548668,1.26399978118577,2.21559419351475,0.779358013808606,0.70667914902068,2.39433813620357,0,2.54805239706646,0,1.08245520505607,1.01343946190039,0,1.82694207550496,4.40194402200192,4.75014845007439,3.64319186208885,3.95805121805784,2.99800146432876,3.91878865436819,5.17390311397101,3.39299796590124,0.988779870937496,4.19338135067744,4.42305275974937,3.88240439873782,3.5334642953663,6.30337829075789,1.86391761218122,5.27005434620785,4.39838084308256,2.81002760729451,3.35482348616577,1.19980546198682,1.52484272487678,4.04434726393021,5.49000723382352,5.6544458450789,4.51943232499919,3.58001640262463,5.194701113989,2.92034273521964,4.27725328171328,5.349499736234,4.29628689337247,2.94618598241064,3.6433724029557,2.75882525320168,5.58192602396583,4.9732589885786,5.57899293040888,3.45907044769094,4.68508622798644,5.17406741478031,4.95806383745537,6.05139456537022,6.862093842394,6.35667624039967,7.22922847986555,6.61679116392116,5.55611768301447,4.37875387000685,0.702213187313235,1.54408744268829,2.84163499395593,3.93538967817454,6.0976775595085,5.04173772090842,5.68187365404505,5.1158700254325,4.78228049950873,4.65067889500816,3.75582761959467,3.15266424391358,2.63295759861569,3.77585167381919,4.86412857275134,3.36259971078264,2.41505126820156,2.41571553768669,3.99550902271842,5.9684675179985,0.991256348951394,1.32225283331772,5.97207101498655,6.0381534683714,6.95884291139304,5.84882221407693,4.00280478920767,3.42406127002606,2.84717436926707,2.47048432086016,2.76468729680296,4.17808591286417,4.28920991662064,1.79763881730844,1.94524244887225,2.58883655230677,3.60369011810855,3.77020091612105,7.88954149711563,5.09128319613286,3.87904974335251,3.71719845418688,3.73095569033118,2.36176236767363,1.72698600625512,2.83813477020141,1.77871576252289,4.83850806576673,4.12773889737726,2.69834534861824,1.82574109249653,4.3411888755435,1.01850340712568,4.31544206176216,3.08056930872567,1.09824565275233,4.31304619582064,3.34926852901653,4.05648975048929,2.77836765741823,1.4351793081753,3.37710464954357,4.43407656399851,4.35830247072115,4.88894929326078,5.7713329163564,7.04070744865506,7.03526281255626,4.28478553594825,5.07347484430277,7.25121662888479,5.75808193086815,7.97273843287435,5.57135270033509,2.76295970985433,3.61622646453779,3.01582567878545,0,4.42587845717133,6.34654516500885,2.88991061978026,3.98519734413491,2.62295912602681,1.00988370881749,3.78609863299508,4.29482618726302,4.95473814785438,6.69112634267146,5.12436950389506,5.94460714656548,7.2865926301481,2.63030272120181,4.34816555741176,5.46246237917072,3.83238230062325,6.05423052468668,5.53815661802159,7.09371528781903,5.30980553359851,5.34117399540959,3.32555912661226,3.77210159511796,3.54362271456927,3.3817866273832,4.65170927702798,3.99887102425256,3.20847640546249,2.52829406348653,5.27093042874994,2.06271086496374,1.70219802876894,3.42116078659489,4.13947788104814,3.00071849044229,3.72414490648775,2.49716344642899,2.46823530903181,3.34911444026059,2.58138878870081,1.69465656691056,2.42581237860458,5.44124634706884,4.03661066739764,5.12659861889325,2.74556391207214,2.79039529566604,4.66369338607761,5.7481843623258,2.05045056957423,4.95328483111734,3.51869602002452,1.69531611304222,4.10082683163076,3.20289442489132,2.54967644990783,2.37917468950219,1.93479963326193,0,3.79603192297362,5.28630614529807,5.40026704109006,6.89991376847747,3.71216358368502,4.72025212346872,4.95920734352016,2.87931536182433,1.8146096260851,4.34937519160848,0.56369293868419,3.5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| ||
|short_description=p4@Rai1 | |short_description=p4@Rai1 | ||
}} | }} |
Latest revision as of 19:50, 1 October 2015
Short description: | p4@Rai1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Rai1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000064190, ENSMUST00000149770, NM_009021, uc007jfk.1, uc011xvq.1_5end |
EntrezGene: | Rai1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anterior region of body | 4.44e-08 | 43 |
thymus | 2.22e-07 | 23 |
neck | 2.22e-07 | 23 |
respiratory system epithelium | 2.22e-07 | 23 |
hemolymphoid system gland | 2.22e-07 | 23 |
pharyngeal epithelium | 2.22e-07 | 23 |
thymic region | 2.22e-07 | 23 |
pharyngeal gland | 2.22e-07 | 23 |
entire pharyngeal arch endoderm | 2.22e-07 | 23 |
thymus primordium | 2.22e-07 | 23 |
early pharyngeal endoderm | 2.22e-07 | 23 |
gland of gut | 2.38e-07 | 24 |
respiratory system | 5.65e-07 | 42 |
respiratory tract | 6.12e-07 | 41 |
tissue | 7.04e-07 | 349 |
pharynx | 9.87e-07 | 24 |
upper respiratory tract | 9.87e-07 | 24 |
chordate pharynx | 9.87e-07 | 24 |
pharyngeal arch system | 9.87e-07 | 24 |
pharyngeal region of foregut | 9.87e-07 | 24 |