FFCP PHASE1:Hg19::chr11:119599846..119599857,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5818 | |EntrezGene=5818 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9706 | |HGNC=9706 | ||
|TSSclassifier=strong | |||
|UniProt=Q15223 | |UniProt=Q15223 | ||
|association_with_transcript=-52bp_to_ENST00000264025_5end | |association_with_transcript=-52bp_to_ENST00000264025_5end | ||
|cluster_id=chr11:119599846..119599857,- | |||
|coexpression_cluster_id=C3096 | |||
|description=CAGE_peak_4_at_PVRL1_5end | |description=CAGE_peak_4_at_PVRL1_5end | ||
|id=chr11:119599846..119599857,- | |id=chr11:119599846..119599857,- | ||
|ontology_enrichment_celltype=CL:0002076!7.90e-12!43;CL:0000066!6.30e-10!254;CL:0000223!4.13e-09!59;CL:0002368!2.95e-07!13;CL:0002251!4.72e-07!21 | |ontology_enrichment_celltype=CL:0002076!7.90e-12!43;CL:0000066!6.30e-10!254;CL:0000223!4.13e-09!59;CL:0002368!2.95e-07!13;CL:0002251!4.72e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.14e-17;13!CL:0002076;3.87e-15;42!CL:0000244;1.28e-12;4!CL:0000731;1.28e-12;4!CL:0002159;1.96e-12;14!CL:0000240;5.81e-12;6!CL:0000311;5.81e-12;6!CL:0000079;5.81e-12;6!CL:0000237;5.81e-12;6!CL:0000784;9.16e-10;3!CL:0000312;1.19e-09;5!CL:0000307;1.64e-09;3!CL:0002202;3.94e-08;9!CL:0002632;3.94e-08;9!CL:0000362;4.88e-08;9!CL:0000575;1.83e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.64e-18,42;CL:0002368,8.80e-18,13;CL:0000223,1.44e-13,58;CL:0000244,9.36e-13,4;CL:0000731,9.36e-13,4;CL:0002159,3.29e-12,14;CL:0000240,1.67e-11,6;CL:0000311,1.67e-11,6;CL:0000079,1.67e-11,6;CL:0000237,1.67e-11,6;CL:0000036,1.67e-11,6;CL:0000357,1.67e-11,6;CL:0000114,1.67e-11,6;CL:0000066,2.14e-10,253;CL:0000784,5.94e-10,3;CL:0000068,1.35e-09,3;CL:0000069,1.35e-09,3;CL:0000307,1.35e-09,3;CL:0000377,1.35e-09,3;CL:0000312,2.94e-09,5;CL:0002202,3.11e-08,9;CL:0002632,3.11e-08,9;CL:0000362,8.33e-08,9;CL:0000575,1.79e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000357;5.81e-12;6!CL:0000114;5.81e-12;6!CL:0000377;1.64e-09;3!CL:0000223;1.42e-08;58 | |||
|ontology_enrichment_disease=DOID:1749!6.20e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.31e-13!82;UBERON:0005743!4.17e-13!86;UBERON:0000073!2.07e-12!94;UBERON:0001016!2.07e-12!94;UBERON:0004121!3.66e-12!169;UBERON:0000153!1.42e-11!129;UBERON:0007811!1.42e-11!129;UBERON:0001049!2.54e-11!57;UBERON:0005068!2.54e-11!57;UBERON:0006241!2.54e-11!57;UBERON:0007135!2.54e-11!57;UBERON:0000924!3.31e-11!173;UBERON:0006601!3.31e-11!173;UBERON:0000033!3.87e-11!123;UBERON:0000955!2.57e-10!69;UBERON:0006238!2.57e-10!69;UBERON:0007023!1.80e-09!115;UBERON:0003075!3.08e-09!86;UBERON:0007284!3.08e-09!86;UBERON:0002616!2.30e-08!59;UBERON:0002346!4.36e-08!90;UBERON:0002780!2.98e-07!41;UBERON:0001890!2.98e-07!41;UBERON:0006240!2.98e-07!41;UBERON:0001893!4.08e-07!34;UBERON:0001950!7.12e-07!20;UBERON:0003080!7.36e-07!42;UBERON:0002020!9.04e-07!34;UBERON:0003528!9.04e-07!34;UBERON:0002619!9.69e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;5.65e-15;5!UBERON:0005910;2.06e-12;6!UBERON:0000486;1.86e-08;12!UBERON:0005162;9.16e-07;2!UBERON:0000122;9.16e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,7.05e-15,5;UBERON:0005910,2.47e-12,6;UBERON:0010371,2.43e-08,104;UBERON:0005162,6.14e-07,2;UBERON:0000122,6.14e-07,2 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0,0.123766352960047,0,0,0,0,0,0.369363174230364,0.204000691244253,0,0,0,0,0.152826811495903,0.0821005894499457,0.236132343941038,0,0,0.619264493264304,2.75826367343678,0.90361775633475,2.9580320813343,0.387336002901508,0.284338464974843,0,0.553995408531877,0.802177789880567,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.289648807765598,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.261958150995425,3.64295288292542,4.07862887062872,0,0.174129737299267,0.664789802594326,3.57735936458013,3.43196946468077,1.85728750664782,0,0,0.347140501607594,0.56530794192401,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0.267899184852239,0,0,1.53316637465883,0.949265659568129,0.183201743930407,0,0,5.23312862571041,0,0,0.132409180813219,0.286836620748814,0,0,0,0.49333509683432,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,2.18196896472668,0.860413786167011,0.121973706129595,0.662648841607426,0.580969714347592,0.310983165046111,0,1.09493207722749,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0.269662616320329,0,0,0,0,0.4115740113314,0,0,0,0,0,0.368965315629341,0,2.74375713521564,4.49607013030478,1.00528972411631,1.38882667737794,0.651616610620649,0,0,0.115930404975077,0,0,0,0,0.790204397959275,0,0,0,0.148631162288728,0,1.51183915378974,0.850650583454319,1.34337784054272,0.581267877027924,1.91691339582606,0,0,0.207328115540772,0,0.37872730027914,0.063497894292169,0,0,0,0,0,0,0.224262168690721,0,0.1466765716419,0,0,0,0,0,0,1.41849132023278,0,0,0,0.823240336780769,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0.256686072559497,0.508189248444927,1.30139853857622,0,0.670065061337395,0,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0.184369168541703,0,0.195801157462741,0.343143423810856,0.206768026122887,0.215714200818617,0.320182673410333,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0.116210378459959,0.362578348774867,3.20810352485256,3.31491560169227,0,0,0,0,0,0.784349769176855,0,0.105551628892876,1.13733384070897,0.170093705276516,0.215915916102139,0,0,0,0.254876273045038,0,0.447749509444357,0.219259876645935,0.784306353074702,0.256450125116389,0,0,0,0.183138929636687,0.082509499920588,2.87132768998086,0.650060246036521,0,0.096670718292122,0,0,0,0,0.145016693914229,0,0,3.8015530533025,4.22818148203234,2.04180339991335,5.4625201661997,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0.349934720244983,1.82822014178473,2.68120910214315,2.17781969722645,0.188287601553558,2.58303223602738,3.36942951335251,7.09488245658681,1.83778720165568,0,0,0,0,0,0,0,0,0,1.92495971052672,1.96032172784825,0.743212700502875,0,0.284567373393656,0,0.399158742865633,0.383010740264733,0.211673582723883,0,0,0,0.313359791546046,0,0.169291777801603,0,0,0,0.687010689511529,0,0,0,0,0,0,0.270455678475983,0,0,0.18714054040822,0,0.121360521749513,0.111443384277478,0,0,0,0.614321404198464,1.9882952955326,0.140669416410513,0.111308705022906,0.16480387422676,0.422250816255987,0,0.276283915531148,0.251932747854276,0.409074730008619,1.10776324914963,0,0,0,0,0.493217028184668,0,0,1.93866549219044,0.649376687132959,0,0.520855522170466,0.437299999980979,0,2.27586896570999,0,0,0.344743373241465,0,0.868124974666461,0,0.241192877250816,1.52581736317083,0.663475559587348,0.591095237907095,0.658156191461918,0,1.81250867562184,0.461701551022782,0.455768223388005,0.23056390438806,0.179515288819544,0.217294743844016,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0.317873157960757,0,0.163232808159148,0,0.216388639742091,0.995261931078505,0.176915129006678,0,0,0.123563938946503,0.313265848516366,1.81983059047828,0,0.702793337176017,0.182454789215666,1.17398771359254,0,0,0,0,0.189559738885464,0,0,0,0.330991955875499,0.627865836814451,0,0,0.138674673013139,0.173559738335131,1.37189356380129,0.609414446062818,0,0,0.0967563312890851,0,0,1.35784623083787,0,0.677942222341597,0.274083849293502,0,1.45614830698521,0,0.0801588202515337,0.213452994739353,0,0.288180834308212,0.114536596165916,0,0.14405479798815,0,0.235694034616795,0,0.104602846312333,0.407992870545287,0.288950589901519,0,0.821432273351958,0,0.429765441419957,0,0,0,0,0.199679000498991,0,0,0.201550417460179,0,0,0.393915911536118,0,0.202210631562555,0.295282444544246,0,0,0.681017030557878,1.12527203925513,0.550157746388935,0.415440338029185,0.2249738915515,0,0.971992906528395,1.67717343799633,0.394028536495991,0.0524545881349981,0,0,0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| ||
|short_description=p4@PVRL1 | |short_description=p4@PVRL1 | ||
}} | }} |
Latest revision as of 04:18, 16 September 2015
Short description: | p4@PVRL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PVRL1_5end |
Coexpression cluster: | C3096_Urothelial_Small_Corneal_Prostate_Esophageal_Bronchial_cervical |
Association with transcript: | -52bp_to_ENST00000264025_5end |
EntrezGene: | PVRL1 |
HGNC: | 9706 |
UniProt: | Q15223 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.64e-18 | 42 |
respiratory epithelial cell | 8.80e-18 | 13 |
endodermal cell | 1.44e-13 | 58 |
transitional epithelial cell | 9.36e-13 | 4 |
urothelial cell | 9.36e-13 | 4 |
general ecto-epithelial cell | 3.29e-12 | 14 |
stratified squamous epithelial cell | 1.67e-11 | 6 |
keratin accumulating cell | 1.67e-11 | 6 |
stratified epithelial cell | 1.67e-11 | 6 |
keratinizing barrier epithelial cell | 1.67e-11 | 6 |
epithelial fate stem cell | 1.67e-11 | 6 |
stratified epithelial stem cell | 1.67e-11 | 6 |
surface ectodermal cell | 1.67e-11 | 6 |
epithelial cell | 2.14e-10 | 253 |
plasmacytoid dendritic cell | 5.94e-10 | 3 |
duct epithelial cell | 1.35e-09 | 3 |
branched duct epithelial cell | 1.35e-09 | 3 |
tracheal epithelial cell | 1.35e-09 | 3 |
tracheoblast | 1.35e-09 | 3 |
keratinocyte | 2.94e-09 | 5 |
epithelial cell of tracheobronchial tree | 3.11e-08 | 9 |
epithelial cell of lower respiratory tract | 3.11e-08 | 9 |
epidermal cell | 8.33e-08 | 9 |
corneal epithelial cell | 1.79e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
urothelium | 7.05e-15 | 5 |
transitional epithelium | 2.47e-12 | 6 |
ecto-epithelium | 2.43e-08 | 104 |
multi cell component structure | 6.14e-07 | 2 |
neuron projection bundle | 6.14e-07 | 2 |