Personal tools

FFCP PHASE1:Mm9::chr13:115879674..115879694,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=597
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr13:115879674..115879694,+
|description=CAGE_peak_at_chr13:115879674..115879694,+
|description=CAGE_peak_at_chr13:115879674..115879694,+
|id=chr13:115879674..115879694,+
|id=chr13:115879674..115879694,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000239,7.73e-08,6;CL:0000677,7.73e-08,6;CL:0000584,7.73e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!3.67e-17!130;UBERON:0000925!3.67e-17!130;UBERON:0006595!3.67e-17!130;UBERON:0000160!6.92e-17!43;UBERON:0001007!2.97e-16!128;UBERON:0001555!2.97e-16!128;UBERON:0007026!2.97e-16!128;UBERON:0004921!3.79e-15!126;UBERON:0004185!3.79e-15!126;UBERON:0005409!6.01e-14!59;UBERON:0002365!6.93e-10!25;UBERON:0002330!6.93e-10!25;UBERON:0002107!2.75e-08!22;UBERON:0007499!2.75e-08!22;UBERON:0006925!2.75e-08!22;UBERON:0009497!2.75e-08!22;UBERON:0000015!2.75e-08!22;UBERON:0002423!2.75e-08!22;UBERON:0006235!2.75e-08!22;UBERON:0008835!2.75e-08!22;UBERON:0003894!2.75e-08!22;UBERON:0004161!2.75e-08!22;UBERON:0008836!2.75e-08!22;UBERON:0002108!3.18e-08!16;UBERON:0000344!1.14e-07!15;UBERON:0009854!1.72e-07!23;UBERON:0009856!1.72e-07!23;UBERON:0005177!1.84e-07!85
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.53e-19,31;UBERON:0002365,2.00e-16,25;UBERON:0002330,2.00e-16,25;UBERON:0004119,7.42e-14,118;UBERON:0000925,7.42e-14,118;UBERON:0006595,7.42e-14,118;UBERON:0002107,2.00e-13,22;UBERON:0007499,2.00e-13,22;UBERON:0006925,2.00e-13,22;UBERON:0009497,2.00e-13,22;UBERON:0000015,2.00e-13,22;UBERON:0002423,2.00e-13,22;UBERON:0006235,2.00e-13,22;UBERON:0008835,2.00e-13,22;UBERON:0003894,2.00e-13,22;UBERON:0004161,2.00e-13,22;UBERON:0008836,2.00e-13,22;UBERON:0001007,1.11e-12,116;UBERON:0001555,1.11e-12,116;UBERON:0007026,1.11e-12,116;UBERON:0009854,1.27e-12,23;UBERON:0009856,1.27e-12,23;UBERON:0005409,9.25e-12,47;UBERON:0004921,2.76e-11,114;UBERON:0000344,4.16e-11,15;UBERON:0001264,9.71e-11,12;UBERON:0005177,2.76e-09,79;UBERON:0004923,5.49e-09,24;UBERON:0001242,6.25e-09,13;UBERON:0001262,6.25e-09,13;UBERON:0004786,6.25e-09,13;UBERON:0002100,4.40e-07,90;UBERON:0005172,9.38e-07,49;UBERON:0005173,9.38e-07,49;UBERON:0002417,9.38e-07,49;UBERON:0000916,9.38e-07,49
|phase1_expression=0.160148847104794,3.14077866875425,3.18499467572675,3.62957053568196,4.00716583957078,2.85394762250213,3.27057696833736,0,0.140788722151667,0,0,0.159544317990673,0,0,0.333109761815663,0,0.699561878128147,0.157731082679119,0.137114433605739,0,0.510259740906419,0.0992909512008853,0,4.31979541542198,4.12936705920906,2.8711598205751,3.01533397311352,5.38678081714723,4.75058548640935,3.78045194639896,2.66076612786366,0,0,0,0,0.664938581433969,0.816677425049476,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0.85960031981627,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383062014255563,0.307213066512487,0.131886287730194,0,0,0.279182999001381,0,0,0.294628585473668,0,0,0,0.0755715601067855,0,0,1.3599426674155,2.15881276655127,8.4470934268197,4.03224198387602,1.12355536105401,0.170430322578058,0,0.35333957451034,0.281686839553361,0,0,0,0.216491041011214,0.760079596425296,0,2.96878087269556,0,0.29688427812965,0.173485326766136,0.304465478312141,0,0.452167921657868,0,0.125666591329675,1.48316980640624,0.144599356919912,0,0.161766849947409,0,0.484875253135222,0,0,0,5.10914110417183,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0.20778804455956,0.162241263067758,0.101839363850316,0.373220911830279,1.26361379216837,0.210441855886474,0.130120442962704,0,0,0,0,0,0,0,0,0.189106080167819,0,0.219195732427575,0,0,0,0,0.702213187313235,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0,0.196764231747404,0,0.465067889500816,0.268273401399619,0.467061369468678,0.16455984991348,0.820837320395476,0.324275238183423,0.584799949701329,0.219550115291051,0.671032093801859,0,0,7.59963200862735,8.19796756656987,0,0.232236671860439,0.902072229254653,2.01683524623343,2.66853652613844,1.14135375667535,5.69434873853414,1.4822905925161,2.01068167040216,1.1937388322469,2.14460495831032,5.39291645192533,4.75503709724327,2.98711909881551,0,0,0,0.203651327845314,0.387904974335251,0.420814919341911,0.569128834118316,2.06654207171443,1.41298855057237,1.1105744752962,6.81841042300442,0.166845105716094,1.17935397067922,0.224862112384854,1.42002084971952,2.17059443777175,2.29163266603278,2.87696137450811,2.7562988551756,4.94210543738547,5.75072826109418,2.60498663367952,3.74445207737473,5.05157755894223,8.25228102200796,0.964887042726734,1.29327233116623,0.189491411770485,0,0,0,0.335012514883631,0.476087281772027,0,0.630540576424764,0.221464689648775,0,0.81931657357869,0.172684981865896,0.723245292907558,0,0,7.86822836830458,2.20749397043786,0.321101179975584,0,0,0.504941854408746,0,0,0,0.238968797952552,0,0,0,0.292255857911312,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0,6.63725691699814,0,1.209294227859,2.26326095707078,2.65771703592696,2.45948118355142,1.80899805217755,1.81766864738753,1.78248689192361,3.79244109522979,6.32511651449993,7.21948802737308,0.340439605753788,0,0,0,0.177340233642274,0,0.329098041204242,0.608929898229199,2.11204537257339,1.90648863777438,0.882113592219848,0.16488625294148,0,0.0603129249281559,0,0.164140899745061,4.37221254944776,0.370850604021019,0.170870880797853,0.206386867963223,0.185194527369712,0,0,0.457556346413045,0.169978429993855,0,0.138199973804424,0,0.158167996790568,0.203319467126849,0.648032044930808,0,0.436725127492355,0.134864346384821,0.578574190077352,1.04702376793612,1.29614973291793,2.4853572523477,0,0,0,0,0.258319646955462,0.337912250981556,0,0,0.209718688851422,0,0,0.948033361884535,0.405450430580328,0.102710957164827,0,0,0,0,0.147689527174577,0.302899349844443,0.304827226619999,0.100826185136841,0.0974578807397524,0.288635524920988,0.116876902181569,0.453460767230423,0.887943813496259,1.52513556236109,1.00730769818447,0.386379188064381,1.12609485270709,0.36630324853453,0.214368379079066,3.51100472824754,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0.972426868273176,0.419226325255965,0.367687016900028,0.44449345560323,0.412070114477788,0.64183841918363,0.505394423527595,0,0.565879024158229,0.749132059759059,0.256100609619477,0.459483751644906,0,0.347652977834566,0,0,0.588795680537589,0,0.354951612318675,0.238436189947321,0.726732083161643,0.752875043322645,0.423073039458382,0.365855945745545,0,0.135804113845862,0.561142271657738,0.711810108745045,0.29551344712669,0,0.929621047115796,0.385813221962283,0,0,0.429742108096597,0,0.220591419119515,0
|phase1_expression=0.160148847104794,3.14077866875425,3.18499467572675,3.62957053568196,4.00716583957078,2.85394762250213,3.27057696833736,0,0.140788722151667,0,0,0.159544317990673,0,0,0.333109761815663,0,0.699561878128147,0.157731082679119,0.137114433605739,0,0.510259740906419,0.0992909512008853,0,4.31979541542198,4.12936705920906,2.8711598205751,3.01533397311352,5.38678081714723,4.75058548640935,3.78045194639896,2.66076612786366,0,0,0,0,0.664938581433969,0.816677425049476,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0.85960031981627,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383062014255563,0.307213066512487,0.131886287730194,0,0,0.279182999001381,0,0,0.294628585473668,0,0,0,0.0755715601067855,0,0,1.3599426674155,2.15881276655127,8.4470934268197,4.03224198387602,1.12355536105401,0.170430322578058,0,0.35333957451034,0.281686839553361,0,0,0,0.216491041011214,0.760079596425296,0,2.96878087269556,0,0.29688427812965,0.173485326766136,0.304465478312141,0,0.452167921657868,0,0.125666591329675,1.48316980640624,0.144599356919912,0,0.161766849947409,0,0.484875253135222,0,0,0,5.10914110417183,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0.20778804455956,0.162241263067758,0.101839363850316,0.373220911830279,1.26361379216837,0.210441855886474,0.130120442962704,0,0,0,0,0,0,0,0,0.189106080167819,0,0.219195732427575,0,0,0,0,0.702213187313235,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0,0.196764231747404,0,0.465067889500816,0.268273401399619,0.467061369468678,0.16455984991348,0.820837320395476,0.324275238183423,0.584799949701329,0.219550115291051,0.671032093801859,0,0,7.59963200862735,8.19796756656987,0,0.232236671860439,0.902072229254653,2.01683524623343,2.66853652613844,1.14135375667535,5.69434873853414,1.4822905925161,2.01068167040216,1.1937388322469,2.14460495831032,5.39291645192533,4.75503709724327,2.98711909881551,0,0,0,0.203651327845314,0.387904974335251,0.420814919341911,0.569128834118316,2.06654207171443,1.41298855057237,1.1105744752962,6.81841042300442,0.166845105716094,1.17935397067922,0.224862112384854,1.42002084971952,2.17059443777175,2.29163266603278,2.87696137450811,2.7562988551756,4.94210543738547,5.75072826109418,2.60498663367952,3.74445207737473,5.05157755894223,8.25228102200796,0.964887042726734,1.29327233116623,0.189491411770485,0,0,0,0.335012514883631,0.476087281772027,0,0.630540576424764,0.221464689648775,0,0.81931657357869,0.172684981865896,0.723245292907558,0,0,7.86822836830458,2.20749397043786,0.321101179975584,0,0,0.504941854408746,0,0,0,0.238968797952552,0,0,0,0.292255857911312,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0,6.63725691699814,0,1.209294227859,2.26326095707078,2.65771703592696,2.45948118355142,1.80899805217755,1.81766864738753,1.78248689192361,3.79244109522979,6.32511651449993,7.21948802737308,0.340439605753788,0,0,0,0.177340233642274,0,0.329098041204242,0.608929898229199,2.11204537257339,1.90648863777438,0.882113592219848,0.16488625294148,0,0.0603129249281559,0,0.164140899745061,4.37221254944776,0.370850604021019,0.170870880797853,0.206386867963223,0.185194527369712,0,0,0.457556346413045,0.169978429993855,0,0.138199973804424,0,0.158167996790568,0.203319467126849,0.648032044930808,0,0.436725127492355,0.134864346384821,0.578574190077352,1.04702376793612,1.29614973291793,2.4853572523477,0,0,0,0,0.258319646955462,0.337912250981556,0,0,0.209718688851422,0,0,0.948033361884535,0.405450430580328,0.102710957164827,0,0,0,0,0.147689527174577,0.302899349844443,0.304827226619999,0.100826185136841,0.0974578807397524,0.288635524920988,0.116876902181569,0.453460767230423,0.887943813496259,1.52513556236109,1.00730769818447,0.386379188064381,1.12609485270709,0.36630324853453,0.214368379079066,3.51100472824754,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0.972426868273176,0.419226325255965,0.367687016900028,0.44449345560323,0.412070114477788,0.64183841918363,0.505394423527595,0,0.565879024158229,0.749132059759059,0.256100609619477,0.459483751644906,0,0.347652977834566,0,0,0.588795680537589,0,0.354951612318675,0.238436189947321,0.726732083161643,0.752875043322645,0.423073039458382,0.365855945745545,0,0.135804113845862,0.561142271657738,0.711810108745045,0.29551344712669,0,0.929621047115796,0.385813221962283,0,0,0.429742108096597,0,0.220591419119515,0
|short_description=p@chr13:115879674..115879694,+
|short_description=p@chr13:115879674..115879694,+
}}
}}

Latest revision as of 15:34, 5 August 2015

Short description:p@chr13:115879674..115879694, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr13:115879674..115879694, +
Coexpression cluster:MCL_coexpression_mm9:597
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr13:115879674..115879694+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.63
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.27
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.13
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I25.39
Ileum epithelium, pool1.CNhs13199.10252-104B94.75
Ileum epithelium, pool2.CNhs13232.10253-104C13.78
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F48.45
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.97
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H75.11
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I37.60
intestine, adult.CNhs10496.178-9A38.20
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D15.69
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E34.76
intestine, neonate N30.CNhs11131.1384-42G12.99
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I12.07
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B26.82
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G42.88
liver, neonate N00.CNhs11117.641-24F42.76
liver, neonate N03.CNhs11123.1345-25G24.94
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A35.05
liver, neonate N25.CNhs11198.1368-26H18.25
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B67.87
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E52.26
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I14.37
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I11.30
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.53
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
brush border epithelial cell7.73e-086
gut absorptive cell7.73e-086
enterocyte7.73e-086

Uber anatomy
Ontology termp-valuen
intestine9.53e-1931
exocrine gland2.00e-1625
exocrine system2.00e-1625
endoderm-derived structure7.42e-14118
endoderm7.42e-14118
presumptive endoderm7.42e-14118
liver2.00e-1322
epithelial sac2.00e-1322
digestive gland2.00e-1322
epithelium of foregut-midgut junction2.00e-1322
anatomical boundary2.00e-1322
hepatobiliary system2.00e-1322
foregut-midgut junction2.00e-1322
hepatic diverticulum2.00e-1322
liver primordium2.00e-1322
septum transversum2.00e-1322
liver bud2.00e-1322
digestive system1.11e-12116
digestive tract1.11e-12116
primitive gut1.11e-12116
digestive tract diverticulum1.27e-1223
sac1.27e-1223
gastrointestinal system9.25e-1247
subdivision of digestive tract2.76e-11114
mucosa4.16e-1115
pancreas9.71e-1112
trunk region element2.76e-0979
organ component layer5.49e-0924
intestinal mucosa6.25e-0913
wall of intestine6.25e-0913
gastrointestinal system mucosa6.25e-0913
trunk4.40e-0790
abdomen element9.38e-0749
abdominal segment element9.38e-0749
abdominal segment of trunk9.38e-0749
abdomen9.38e-0749
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:115879674..115879694,%2B&oldid=3915212"