FFCP PHASE1:Hg19::chr11:124735323..124735332,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64221 | |EntrezGene=64221 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13433 | |HGNC=13433 | ||
|TSSclassifier=strong | |||
|UniProt=Q96MS0 | |UniProt=Q96MS0 | ||
|association_with_transcript=18bp_to_NM_022370_5end | |association_with_transcript=18bp_to_NM_022370_5end | ||
|cluster_id=chr11:124735323..124735332,+ | |||
|description=CAGE_peak_21_at_ROBO3_5end | |description=CAGE_peak_21_at_ROBO3_5end | ||
|id=chr11:124735323..124735332,+ | |id=chr11:124735323..124735332,+ | ||
|ontology_enrichment_celltype=CL:0000540!7.69e-07!6;CL:0000031!7.69e-07!6;CL:0000404!7.69e-07!6 | |ontology_enrichment_celltype=CL:0000540!7.69e-07!6;CL:0000031!7.69e-07!6;CL:0000404!7.69e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000123;3.11e-21;2!CL:0000242;3.11e-21;2!CL:0000095;1.99e-09;17!CL:0000312;2.53e-09;5!CL:0002322;3.10e-09;5!CL:0000240;5.54e-08;6!CL:0000311;5.54e-08;6!CL:0000079;5.54e-08;6!CL:0000237;5.54e-08;6!CL:0002319;6.43e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,3.11e-21,2;CL:0000095,1.99e-09,17;CL:0000123,1.99e-09,17;CL:0000312,2.53e-09,5;CL:0002322,2.97e-09,5;CL:0000333,3.87e-09,41;CL:0000240,5.54e-08,6;CL:0000311,5.54e-08,6;CL:0000079,5.54e-08,6;CL:0000237,5.54e-08,6;CL:0000036,5.54e-08,6;CL:0000357,5.54e-08,6;CL:0000114,5.54e-08,6;CL:0002319,6.43e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0007297;5.15e-21;2!CL:0000357;5.54e-08;6!CL:0000114;5.54e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!6.95e-20!32;UBERON:0001950!1.79e-19!20;UBERON:0001893!1.12e-18!34;UBERON:0001870!1.56e-18!2;UBERON:0002619!1.01e-17!22;UBERON:0005743!7.01e-17!86;UBERON:0001872!2.73e-16!5;UBERON:0000956!1.35e-15!25;UBERON:0000203!1.35e-15!25;UBERON:0002780!2.34e-15!41;UBERON:0001890!2.34e-15!41;UBERON:0006240!2.34e-15!41;UBERON:0002791!2.92e-15!33;UBERON:0001017!2.96e-15!82;UBERON:0000073!4.29e-15!94;UBERON:0001016!4.29e-15!94;UBERON:0003056!5.49e-15!61;UBERON:0003080!5.68e-15!42;UBERON:0002020!8.51e-15!34;UBERON:0003528!8.51e-15!34;UBERON:0000200!1.18e-13!6;UBERON:0000955!5.77e-13!69;UBERON:0006238!5.77e-13!69;UBERON:0001049!8.99e-11!57;UBERON:0005068!8.99e-11!57;UBERON:0006241!8.99e-11!57;UBERON:0007135!8.99e-11!57;UBERON:0007023!1.94e-10!115;UBERON:0001301!2.16e-10!1;UBERON:0002616!2.27e-10!59;UBERON:0002702!2.59e-10!1;UBERON:0003075!3.53e-10!86;UBERON:0007284!3.53e-10!86;UBERON:0004121!3.60e-10!169;UBERON:0002581!5.30e-10!1;UBERON:0001874!6.33e-10!1;UBERON:0007190!6.91e-10!1;UBERON:0000924!7.09e-10!173;UBERON:0006601!7.09e-10!173;UBERON:0002022!1.07e-09!1;UBERON:0002346!1.18e-09!90;UBERON:0000033!1.92e-09!123;UBERON:0000153!6.55e-09!129;UBERON:0007811!6.55e-09!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;1.81e-40;1!UBERON:0006947;1.71e-14;3!UBERON:0004054;1.71e-14;3!UBERON:0005904;3.26e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,2.21e-40,1;UBERON:0006947,1.83e-14,3;UBERON:0004054,1.83e-14,3;UBERON:0005904,3.42e-11,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.798848485415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,1.37897349296586,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79562669187248,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0,3.597064508342,0,0,0,0,0,5.50699908721136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197318320688547,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.798848485415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,1.37897349296586,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79562669187248,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0,3.597064508342,0,0,0,0,0,5.50699908721136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197318320688547,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p21@ROBO3 | |short_description=p21@ROBO3 | ||
}} | }} |
Latest revision as of 12:05, 16 September 2015
Short description: | p21@ROBO3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_ROBO3_5end |
Coexpression cluster: | NA |
Association with transcript: | 18bp_to_NM_022370_5end |
EntrezGene: | ROBO3 |
HGNC: | 13433 |
UniProt: | Q96MS0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.11e-21 | 2 |
neuron associated cell | 1.99e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 1.99e-09 | 17 |
keratinocyte | 2.53e-09 | 5 |
embryonic stem cell | 2.97e-09 | 5 |
migratory neural crest cell | 3.87e-09 | 41 |
stratified squamous epithelial cell | 5.54e-08 | 6 |
keratin accumulating cell | 5.54e-08 | 6 |
stratified epithelial cell | 5.54e-08 | 6 |
keratinizing barrier epithelial cell | 5.54e-08 | 6 |
epithelial fate stem cell | 5.54e-08 | 6 |
stratified epithelial stem cell | 5.54e-08 | 6 |
surface ectodermal cell | 5.54e-08 | 6 |
neural cell | 6.43e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
epididymis | 2.21e-40 | 1 |
male genital duct | 1.83e-14 | 3 |
internal male genitalia | 1.83e-14 | 3 |
duct of male reproductive system | 3.42e-11 | 4 |