FFCP PHASE1:Mm9::chr13:43346301..43346307,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:43346301..43346307,+ | |||
|description=CAGE_peak_at_chr13:43346301..43346307,+ | |description=CAGE_peak_at_chr13:43346301..43346307,+ | ||
|id=chr13:43346301..43346307,+ | |id=chr13:43346301..43346307,+ | ||
|ontology_enrichment_celltype=CL:0000084!1.84e-19!11;CL:0000827!1.84e-19!11;CL:0000838!1.13e-17!12;CL:0000542!3.71e-16!13;CL:0000051!3.71e-16!13;CL:0000791!4.94e-15!9;CL:0000789!4.94e-15!9;CL:0002420!4.94e-15!9;CL:0002419!4.94e-15!9;CL:0000790!4.94e-15!9;CL:0000988!3.04e-13!32;CL:0002032!3.04e-13!32;CL:0000037!3.04e-13!32;CL:0000566!3.04e-13!32;CL:0000837!3.04e-13!32;CL:0000624!8.36e-13!8;CL:0000893!9.71e-13!6;CL:0002489!9.71e-13!6;CL:0000898!9.71e-13!6;CL:0000809!9.71e-13!6;CL:0000810!9.71e-13!6;CL:0000895!9.71e-13!6;CL:0000808!9.71e-13!6;CL:0000894!9.71e-13!6;CL:0000806!9.71e-13!6;CL:0000807!9.71e-13!6;CL:0000805!9.71e-13!6;CL:0002425!9.71e-13!6;CL:0002436!9.71e-13!6;CL:0002427!9.71e-13!6;CL:0002428!9.71e-13!6;CL:0002429!9.71e-13!6;CL:0002433!9.71e-13!6;CL:0002431!9.71e-13!6;CL:0002432!9.71e-13!6;CL:0000738!6.95e-12!17;CL:0002087!6.95e-12!17;CL:0002031!4.98e-09!25;CL:0002320!3.45e-08!46;CL:0000134!3.45e-08!46 | |ontology_enrichment_celltype=CL:0000084!1.84e-19!11;CL:0000827!1.84e-19!11;CL:0000838!1.13e-17!12;CL:0000542!3.71e-16!13;CL:0000051!3.71e-16!13;CL:0000791!4.94e-15!9;CL:0000789!4.94e-15!9;CL:0002420!4.94e-15!9;CL:0002419!4.94e-15!9;CL:0000790!4.94e-15!9;CL:0000988!3.04e-13!32;CL:0002032!3.04e-13!32;CL:0000037!3.04e-13!32;CL:0000566!3.04e-13!32;CL:0000837!3.04e-13!32;CL:0000624!8.36e-13!8;CL:0000893!9.71e-13!6;CL:0002489!9.71e-13!6;CL:0000898!9.71e-13!6;CL:0000809!9.71e-13!6;CL:0000810!9.71e-13!6;CL:0000895!9.71e-13!6;CL:0000808!9.71e-13!6;CL:0000894!9.71e-13!6;CL:0000806!9.71e-13!6;CL:0000807!9.71e-13!6;CL:0000805!9.71e-13!6;CL:0002425!9.71e-13!6;CL:0002436!9.71e-13!6;CL:0002427!9.71e-13!6;CL:0002428!9.71e-13!6;CL:0002429!9.71e-13!6;CL:0002433!9.71e-13!6;CL:0002431!9.71e-13!6;CL:0002432!9.71e-13!6;CL:0000738!6.95e-12!17;CL:0002087!6.95e-12!17;CL:0002031!4.98e-09!25;CL:0002320!3.45e-08!46;CL:0000134!3.45e-08!46 | ||
|ontology_enrichment_celltype_v019_2=CL:0000625,7.11e-12,1;CL:0000355,8.55e-12,9 | |||
|ontology_enrichment_disease=DOID:0060100!6.28e-09!3;DOID:4045!6.28e-09!3 | |ontology_enrichment_disease=DOID:0060100!6.28e-09!3;DOID:4045!6.28e-09!3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,7.89e-34,3;DOID:4045,7.89e-34,3;DOID:0050686,2.49e-17,6 | |||
|ontology_enrichment_uberon=UBERON:0004177!7.09e-12!29;UBERON:0002370!3.73e-11!23;UBERON:0000974!3.73e-11!23;UBERON:0004807!3.73e-11!23;UBERON:0005058!3.73e-11!23;UBERON:0003351!3.73e-11!23;UBERON:0009113!3.73e-11!23;UBERON:0003295!3.73e-11!23;UBERON:0009722!3.73e-11!23;UBERON:0005562!3.73e-11!23;UBERON:0007690!3.73e-11!23;UBERON:0006562!1.37e-10!24;UBERON:0003408!1.37e-10!24;UBERON:0001557!1.37e-10!24;UBERON:0001042!1.37e-10!24;UBERON:0008814!1.37e-10!24;UBERON:0009145!1.37e-10!24;UBERON:0002390!1.69e-10!45;UBERON:0003061!1.69e-10!45;UBERON:0002193!1.31e-09!48;UBERON:0000072!3.80e-09!27;UBERON:0002384!3.45e-08!46;UBERON:0005057!1.25e-07!51;UBERON:0002405!2.73e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,8.55e-12,9;UBERON:0002036,8.55e-12,9;UBERON:0002385,8.55e-12,9;UBERON:0000486,8.55e-12,9;UBERON:0007503,8.55e-12,9;UBERON:0001015,8.55e-12,9;UBERON:0002329,8.55e-12,9;UBERON:0003082,8.55e-12,9;UBERON:0003059,8.55e-12,9;UBERON:0007282,8.55e-12,9;UBERON:0004290,8.55e-12,9;UBERON:0009618,8.55e-12,9;UBERON:0000383,1.11e-10,10;UBERON:0007524,9.05e-10,11;UBERON:0003077,9.05e-10,11;UBERON:0007285,9.05e-10,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0.422366166455,0.234064526321993,0.171217968225505,0.0797721589953364,0.171200729931206,0.0874204024189974,0,0,0,0.157731082679119,0,0,0,0.595745707205312,0.783599367416806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18531630736908,5.4693474116666,4.71171369576418,11.1763982725893,4.09827290975067,1.45653105909346,0,0,0,0,0,0,0,0,0,0,0,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.958520996047362,0,0.254140454146129,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0,0.27338845544205,0,0,1.11961161858926,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0.405450430580328,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0.422366166455,0.234064526321993,0.171217968225505,0.0797721589953364,0.171200729931206,0.0874204024189974,0,0,0,0.157731082679119,0,0,0,0.595745707205312,0.783599367416806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18531630736908,5.4693474116666,4.71171369576418,11.1763982725893,4.09827290975067,1.45653105909346,0,0,0,0,0,0,0,0,0,0,0,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.958520996047362,0,0.254140454146129,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0,0.27338845544205,0,0,1.11961161858926,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0.405450430580328,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr13:43346301..43346307,+ | |short_description=p@chr13:43346301..43346307,+ | ||
}} | }} |
Latest revision as of 00:17, 6 August 2015
Short description: | p@chr13:43346301..43346307, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:43346301..43346307, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 7.11e-12 | 1 |
multi-potent skeletal muscle stem cell | 8.55e-12 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 8.55e-12 | 9 |
striated muscle tissue | 8.55e-12 | 9 |
muscle tissue | 8.55e-12 | 9 |
multilaminar epithelium | 8.55e-12 | 9 |
epithelial vesicle | 8.55e-12 | 9 |
musculature | 8.55e-12 | 9 |
somite | 8.55e-12 | 9 |
myotome | 8.55e-12 | 9 |
presomitic mesoderm | 8.55e-12 | 9 |
presumptive segmental plate | 8.55e-12 | 9 |
dermomyotome | 8.55e-12 | 9 |
trunk paraxial mesoderm | 8.55e-12 | 9 |
musculature of body | 1.11e-10 | 10 |
dense mesenchyme tissue | 9.05e-10 | 11 |
paraxial mesoderm | 9.05e-10 | 11 |
presumptive paraxial mesoderm | 9.05e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 7.89e-34 | 3 |
muscle cancer | 7.89e-34 | 3 |
organ system cancer | 2.49e-17 | 6 |