FFCP PHASE1:Mm9::chr13:81796731..81796845,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=80289 | |EntrezGene=80289 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=Q99LE3 | |UniProt=Q99LE3 | ||
|association_with_transcript=0bp_to_ENSMUST00000049055,NM_030257,uc007rhv.1,uc007rhw.1_5end | |association_with_transcript=0bp_to_ENSMUST00000049055,NM_030257,uc007rhv.1,uc007rhw.1_5end | ||
|cluster_id=chr13:81796731..81796845,+ | |||
|description=CAGE_peak_1_at_Lysmd3_5end | |description=CAGE_peak_1_at_Lysmd3_5end | ||
|id=chr13:81796731..81796845,+ | |id=chr13:81796731..81796845,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!6.92e-15!130;UBERON:0000925!6.92e-15!130;UBERON:0006595!6.92e-15!130;UBERON:0001007!3.99e-14!128;UBERON:0001555!3.99e-14!128;UBERON:0007026!3.99e-14!128;UBERON:0004921!3.13e-13!126;UBERON:0004185!3.13e-13!126;UBERON:0005409!1.99e-09!59;UBERON:0000160!2.17e-09!43;UBERON:0000466!3.71e-08!79;UBERON:0009854!1.07e-07!23;UBERON:0009856!1.07e-07!23;UBERON:0002107!2.15e-07!22;UBERON:0007499!2.15e-07!22;UBERON:0006925!2.15e-07!22;UBERON:0009497!2.15e-07!22;UBERON:0000015!2.15e-07!22;UBERON:0002423!2.15e-07!22;UBERON:0006235!2.15e-07!22;UBERON:0008835!2.15e-07!22;UBERON:0003894!2.15e-07!22;UBERON:0004161!2.15e-07!22;UBERON:0008836!2.15e-07!22;UBERON:0002365!6.01e-07!25;UBERON:0002330!6.01e-07!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.29e-13,118;UBERON:0000925,1.29e-13,118;UBERON:0006595,1.29e-13,118;UBERON:0001007,6.91e-13,116;UBERON:0001555,6.91e-13,116;UBERON:0007026,6.91e-13,116;UBERON:0004921,5.00e-12,114;UBERON:0000160,3.21e-09,31;UBERON:0005409,7.91e-09,47;UBERON:0009854,1.07e-07,23;UBERON:0009856,1.07e-07,23;UBERON:0002107,2.15e-07,22;UBERON:0007499,2.15e-07,22;UBERON:0006925,2.15e-07,22;UBERON:0009497,2.15e-07,22;UBERON:0000015,2.15e-07,22;UBERON:0002423,2.15e-07,22;UBERON:0006235,2.15e-07,22;UBERON:0008835,2.15e-07,22;UBERON:0003894,2.15e-07,22;UBERON:0004161,2.15e-07,22;UBERON:0008836,2.15e-07,22;UBERON:0002365,6.01e-07,25;UBERON:0002330,6.01e-07,25 | |||
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| |phase1_expression=19.3780104996801,129.120900826564,133.314777141134,145.485285638585,158.283050663046,27.5322005935499,29.6688053556318,20.5306084272106,36.1827015929784,31.8327755797911,3.5955773327356,2.55270908785077,23.283299270644,22.5544638241013,15.6561588053361,23.6896062846096,26.5833513688696,16.2463015159492,18.6475629703805,13.580468857537,11.5658874605455,6.35462087685666,6.79119451761232,37.2782345108638,33.0349364736725,83.8378667607929,60.7374414584295,56.6689341963888,62.1376581622343,54.1864778983851,30.598810470432,2.54012269383853,4.30545351309199,0,5.48818077527422,5.81821258754723,8.77928231928187,52.7349854728504,31.253413780952,51.828850653406,45.8820560664191,51.2284113718834,46.1234835379596,12.211991343631,11.0500855029271,10.8292583775392,3.12956537739216,3.2703773457067,1.97717564461025,3.88859798148567,2.2397827460058,2.87505128729943,23.4895648480831,47.1485392307374,38.6507869013834,10.5476368774738,14.8997388768154,11.3447860301037,5.26022798234954,4.23192783417626,3.1691570175309,3.72728985276045,7.11435836888911,1.3498495759221,1.97773272513395,0.7104801149461,2.99600110518405,3.07374644257244,9.85051316930538,5.26523159493594,6.73039876324422,6.56997264128748,3.97563373712904,6.73699395682247,4.98396449294829,2.75765635983006,7.70811166995721,7.91661496128164,7.68032666281217,4.2203612073662,6.67859798297591,5.73004707612436,4.4669279840221,5.06486349028512,7.63991238884051,10.3120004915784,8.54230084794618,8.01517617048792,5.45228591998925,7.93501381121248,27.5371264266594,24.9522924324602,89.7562160494231,27.5248627735287,25.9910566979068,32.2579358710082,16.7128859956785,9.37366774179318,7.79358013808606,7.42013106471715,12.6759077799012,10.2661181931454,17.8363667794652,28.4426681261332,9.30911476348221,10.6411143499541,8.59391556525132,42.3622193757712,26.1527262483643,16.92240385339,11.9704875468634,13.7009465240464,9.91646638201052,12.6607018064203,19.9900802130698,14.325991411583,38.3152199988279,26.4616823163438,22.9998743506967,18.1178871941098,19.2132121060542,25.2135131630315,24.2309289583559,13.1751358655196,17.3840766655168,50.8359539865097,16.2948569328052,13.197860081855,14.2318654321832,11.3840885947665,11.4375150704657,11.8115090986093,8.8650403298061,8.69432554923124,7.06479351502504,9.5722345209977,26.3763952372319,16.7949410323626,6.82351447770922,11.7847439296425,12.4915625244196,11.4951052216736,14.945156773844,14.1662528765572,14.4917743192328,15.5017601544668,12.4623293664439,21.9897865128163,8.83828771024653,12.4810012910761,17.7710635405588,12.7133524807993,16.6828349535359,19.5021213252413,18.314610140307,16.7188784127534,10.5331978096985,16.7276139624565,11.3665399758237,16.3629360303046,15.2441938987713,15.6653993471083,16.3353867553795,14.3637889175605,14.8096428371883,16.2773761325285,13.6819434713806,18.9159854634815,16.6205448412615,15.1034066952768,15.8894866709877,13.8889988054066,15.3685080703735,16.6415959262861,11.3556572224629,13.7892180588241,100.116891244091,56.5924212659985,11.7308537794379,12.5407802804637,16.62390251055,18.7565677899709,20.9035361214178,26.6315876557583,54.5708420776188,38.8689533148666,29.4062194296315,32.0319919986253,31.5841821132975,49.4350674759822,56.6281690671699,57.1535454240034,4.55202962287396,13.1385789501188,22.5415471346161,13.8482902934814,13.9645790760691,17.8144982521409,17.2635746349222,17.2703873136135,18.0548537017581,14.9310568345379,33.795599487935,18.8534969459186,20.2455764966599,15.5154857545549,22.9231937169008,22.1882986972223,22.4070749567649,23.0156909960649,17.0241988113787,23.3377201209869,31.629005436018,26.4220072844637,19.0342980599882,25.5104666726583,30.1387654716812,31.3588288886189,22.1703828199926,18.759649765278,20.3706220552532,11.712410918488,10.7957514212711,17.253144516507,23.3282768068293,22.2452358557891,20.650203877911,17.717175171902,23.4398509926506,16.7140581010053,20.3768278601757,19.0936757327595,13.5712155545345,5.4390568381871,13.769399644533,17.6599517635029,9.47248480927973,9.96299336033727,14.0984053023941,11.3611917241968,9.4652465824877,9.37052986311932,9.69405289797595,6.69112634267146,6.01556420022464,6.22768367735431,10.5250782435473,8.18316402151673,7.51046778098395,10.2822821254978,21.149072696032,8.54714897602825,22.9670612688542,18.1467135269789,33.1862845849907,10.1967867185092,12.3952658355548,19.8035333743693,7.67784921490009,17.2163682848599,25.8428293168221,18.9037539328303,16.3988794056972,24.9669038769295,24.2462799722497,34.0347292719017,30.9800041235947,13.8647042404109,4.01011919726539,9.85950361145325,16.3153014950892,14.6262430433698,16.7840001014163,11.8741330154694,24.6405293466896,28.3854974957519,44.1056796109924,14.3451040059088,16.9537648030701,18.6366938028002,14.8021706563889,12.9671310798598,49.8432230637045,10.0129663085675,19.4792804109552,14.859854493352,18.3342582096015,24.2995309536051,20.2307457027117,19.2173665493479,38.2451467486174,44.9244161958942,42.5655919317625,13.3653886522116,14.5514557047322,14.4356821660063,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| ||
|short_description=p1@Lysmd3 | |short_description=p1@Lysmd3 | ||
}} | }} |
Latest revision as of 23:18, 1 October 2015
Short description: | p1@Lysmd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lysmd3_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 0bp_to_ENSMUST00000049055, NM_030257, uc007rhv.1, uc007rhw.1_5end |
EntrezGene: | Lysmd3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.29e-13 | 118 |
endoderm | 1.29e-13 | 118 |
presumptive endoderm | 1.29e-13 | 118 |
digestive system | 6.91e-13 | 116 |
digestive tract | 6.91e-13 | 116 |
primitive gut | 6.91e-13 | 116 |
subdivision of digestive tract | 5.00e-12 | 114 |
intestine | 3.21e-09 | 31 |
gastrointestinal system | 7.91e-09 | 47 |
digestive tract diverticulum | 1.07e-07 | 23 |
sac | 1.07e-07 | 23 |
liver | 2.15e-07 | 22 |
epithelial sac | 2.15e-07 | 22 |
digestive gland | 2.15e-07 | 22 |
epithelium of foregut-midgut junction | 2.15e-07 | 22 |
anatomical boundary | 2.15e-07 | 22 |
hepatobiliary system | 2.15e-07 | 22 |
foregut-midgut junction | 2.15e-07 | 22 |
hepatic diverticulum | 2.15e-07 | 22 |
liver primordium | 2.15e-07 | 22 |
septum transversum | 2.15e-07 | 22 |
liver bud | 2.15e-07 | 22 |
exocrine gland | 6.01e-07 | 25 |
exocrine system | 6.01e-07 | 25 |