FFCP PHASE1:Mm9::chr17:84555738..84555750,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=906 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:84555738..84555750,- | |||
|description=CAGE_peak_at_chr17:84555738..84555750,- | |description=CAGE_peak_at_chr17:84555738..84555750,- | ||
|id=chr17:84555738..84555750,- | |id=chr17:84555738..84555750,- | ||
|ontology_enrichment_celltype=CL:0002563!4.89e-07!9;CL:0002251!4.89e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,2.30e-16,3;CL:0002563,1.56e-14,9;CL:0002251,1.56e-14,9;CL:0002076,1.19e-08,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!6.01e-21!43;UBERON:0005409!7.72e-16!59;UBERON:0000344!1.75e-14!15;UBERON:0001242!2.56e-12!13;UBERON:0000060!2.56e-12!13;UBERON:0001262!2.56e-12!13;UBERON:0004786!2.56e-12!13;UBERON:0004923!7.52e-08!24;UBERON:0003350!4.89e-07!9;UBERON:0004808!4.89e-07!9;UBERON:0001277!4.89e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.22e-34,31;UBERON:0005409,8.81e-25,47;UBERON:0001242,6.12e-19,13;UBERON:0001262,6.12e-19,13;UBERON:0004786,6.12e-19,13;UBERON:0000344,2.53e-16,15;UBERON:0003350,1.56e-14,9;UBERON:0004808,1.56e-14,9;UBERON:0001277,1.56e-14,9;UBERON:0000485,7.28e-12,11;UBERON:0004923,6.28e-10,24;UBERON:0004921,7.11e-09,114;UBERON:0001007,1.11e-08,116;UBERON:0001555,1.11e-08,116;UBERON:0007026,1.11e-08,116;UBERON:0004119,1.72e-08,118;UBERON:0000925,1.72e-08,118;UBERON:0006595,1.72e-08,118 | |||
|phase1_expression=0,0,0,7.25914107136392,4.50806156951712,0.503637815735669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.319984845586813,0.22940928106717,0,0,0.215471232685889,0.570070258369122,1.51218077855958,0.443461021310609,0,0,0,4.91047753577167,4.3221007793208,5.9209113316087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62586296177317,1.05780226665418,0,0.232236671860439,0.77320476793256,1.4117846723634,1.11189021922435,1.52180500890047,0.949058123089023,0.329397909448022,0.754005626400808,0.596869416123452,1.16978452271472,0,1.29682829924817,0.995706366271836,0,0,0,0,0,0,0.252946148497029,0.590440591918409,1.56998727841375,1.72756029490521,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0,0,0,0,0,1.42576470620972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.269141569828427,0,0,0,0.549454872801795,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0.320919209591815,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.347652977834566,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,7.25914107136392,4.50806156951712,0.503637815735669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.319984845586813,0.22940928106717,0,0,0.215471232685889,0.570070258369122,1.51218077855958,0.443461021310609,0,0,0,4.91047753577167,4.3221007793208,5.9209113316087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62586296177317,1.05780226665418,0,0.232236671860439,0.77320476793256,1.4117846723634,1.11189021922435,1.52180500890047,0.949058123089023,0.329397909448022,0.754005626400808,0.596869416123452,1.16978452271472,0,1.29682829924817,0.995706366271836,0,0,0,0,0,0,0.252946148497029,0.590440591918409,1.56998727841375,1.72756029490521,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0,0,0,0,0,1.42576470620972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.269141569828427,0,0,0,0.549454872801795,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0.320919209591815,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.347652977834566,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:84555738..84555750,- | |short_description=p@chr17:84555738..84555750,- | ||
}} | }} |
Latest revision as of 10:14, 5 August 2015
Short description: | p@chr17:84555738..84555750, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:84555738..84555750, - |
Coexpression cluster: | MCL_coexpression_mm9:906 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 2.30e-16 | 3 |
intestinal epithelial cell | 1.56e-14 | 9 |
epithelial cell of alimentary canal | 1.56e-14 | 9 |
endo-epithelial cell | 1.19e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.22e-34 | 31 |
gastrointestinal system | 8.81e-25 | 47 |
intestinal mucosa | 6.12e-19 | 13 |
wall of intestine | 6.12e-19 | 13 |
gastrointestinal system mucosa | 6.12e-19 | 13 |
mucosa | 2.53e-16 | 15 |
epithelium of mucosa | 1.56e-14 | 9 |
gastrointestinal system epithelium | 1.56e-14 | 9 |
intestinal epithelium | 1.56e-14 | 9 |
simple columnar epithelium | 7.28e-12 | 11 |
organ component layer | 6.28e-10 | 24 |
subdivision of digestive tract | 7.11e-09 | 114 |
digestive system | 1.11e-08 | 116 |
digestive tract | 1.11e-08 | 116 |
primitive gut | 1.11e-08 | 116 |
endoderm-derived structure | 1.72e-08 | 118 |
endoderm | 1.72e-08 | 118 |
presumptive endoderm | 1.72e-08 | 118 |