FFCP PHASE1:Mm9::chr18:21249664..21249690,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=131 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:21249664..21249690,+ | |||
|description=CAGE_peak_at_chr18:21249664..21249690,+ | |description=CAGE_peak_at_chr18:21249664..21249690,+ | ||
|id=chr18:21249664..21249690,+ | |id=chr18:21249664..21249690,+ | ||
|ontology_enrichment_celltype=CL:0000239!1.48e-18!6;CL:0000677!1.48e-18!6;CL:0000212!1.48e-18!6;CL:0000584!1.48e-18!6;CL:0000075!8.10e-16!7;CL:0002563!3.68e-12!9;CL:0002251!3.68e-12!9;CL:0002076!4.96e-07!15;CL:0000066!6.63e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.46e-18,6;CL:0000677,1.46e-18,6;CL:0000584,1.46e-18,6;CL:0000075,5.85e-16,7;CL:0002563,1.76e-12,9;CL:0002251,1.76e-12,9;CL:0000682,9.30e-10,3;CL:0000066,1.69e-09,25;CL:0002076,1.39e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.62e-29!15;UBERON:0000160!3.21e-27!43;UBERON:0001242!3.53e-23!13;UBERON:0000060!3.53e-23!13;UBERON:0001262!3.53e-23!13;UBERON:0004786!3.53e-23!13;UBERON:0005409!1.18e-18!59;UBERON:0004923!3.97e-17!24;UBERON:0003350!3.68e-12!9;UBERON:0004808!3.68e-12!9;UBERON:0001277!3.68e-12!9;UBERON:0000331!7.13e-11!3;UBERON:0002116!7.13e-11!3;UBERON:0001204!7.13e-11!3;UBERON:0001168!7.13e-11!3;UBERON:0000485!7.87e-10!11;UBERON:0001007!4.02e-08!128;UBERON:0001555!4.02e-08!128;UBERON:0007026!4.02e-08!128;UBERON:0004119!6.35e-08!130;UBERON:0000925!6.35e-08!130;UBERON:0006595!6.35e-08!130;UBERON:0001962!1.54e-07!2;UBERON:0001961!1.54e-07!2;UBERON:0001744!1.54e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.23e-44,15;UBERON:0001242,3.93e-33,13;UBERON:0001262,3.93e-33,13;UBERON:0004786,3.93e-33,13;UBERON:0004923,1.30e-27,24;UBERON:0000331,8.04e-22,3;UBERON:0002116,8.04e-22,3;UBERON:0001204,8.04e-22,3;UBERON:0001168,8.04e-22,3;UBERON:0000160,4.66e-17,31;UBERON:0002108,1.56e-16,4;UBERON:0001962,1.44e-14,2;UBERON:0001961,1.44e-14,2;UBERON:0001744,1.44e-14,2;UBERON:0003350,1.76e-12,9;UBERON:0004808,1.76e-12,9;UBERON:0001277,1.76e-12,9;UBERON:0005409,5.76e-11,47;UBERON:0000485,2.92e-10,11;UBERON:0002465,5.01e-10,3;UBERON:0003199,2.98e-08,1 | |||
|phase1_expression=0,3.48975407639361,4.09499315450582,1.81478526784098,1.50268718983904,0.16787927191189,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,2.98232065387321,0,1.29228598847722,1.939241094173,13.3016393619462,6.04872311423834,2.88249663851896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0.264450566663544,0,0,0,0,0,0,1.42358718463353,0.329397909448022,0.502670417600539,0.198956472041151,0.38992817423824,0.898819408654221,0.648414149624083,0.597423819763102,0,0,0,0,0,0,0.126473074248515,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,3.48975407639361,4.09499315450582,1.81478526784098,1.50268718983904,0.16787927191189,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,2.98232065387321,0,1.29228598847722,1.939241094173,13.3016393619462,6.04872311423834,2.88249663851896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0.264450566663544,0,0,0,0,0,0,1.42358718463353,0.329397909448022,0.502670417600539,0.198956472041151,0.38992817423824,0.898819408654221,0.648414149624083,0.597423819763102,0,0,0,0,0,0,0.126473074248515,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:21249664..21249690,+ | |short_description=p@chr18:21249664..21249690,+ | ||
}} | }} |
Latest revision as of 14:11, 5 August 2015
Short description: | p@chr18:21249664..21249690, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:21249664..21249690, + |
Coexpression cluster: | MCL_coexpression_mm9:131 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.46e-18 | 6 |
gut absorptive cell | 1.46e-18 | 6 |
enterocyte | 1.46e-18 | 6 |
columnar/cuboidal epithelial cell | 5.85e-16 | 7 |
intestinal epithelial cell | 1.76e-12 | 9 |
epithelial cell of alimentary canal | 1.76e-12 | 9 |
M cell of gut | 9.30e-10 | 3 |
epithelial cell | 1.69e-09 | 25 |
endo-epithelial cell | 1.39e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.23e-44 | 15 |
intestinal mucosa | 3.93e-33 | 13 |
wall of intestine | 3.93e-33 | 13 |
gastrointestinal system mucosa | 3.93e-33 | 13 |
organ component layer | 1.30e-27 | 24 |
ileal mucosa | 8.04e-22 | 3 |
ileum | 8.04e-22 | 3 |
mucosa of small intestine | 8.04e-22 | 3 |
wall of small intestine | 8.04e-22 | 3 |
intestine | 4.66e-17 | 31 |
small intestine | 1.56e-16 | 4 |
gut-associated lymphoid tissue | 1.44e-14 | 2 |
mucosa-associated lymphoid tissue | 1.44e-14 | 2 |
lymphoid tissue | 1.44e-14 | 2 |
epithelium of mucosa | 1.76e-12 | 9 |
gastrointestinal system epithelium | 1.76e-12 | 9 |
intestinal epithelium | 1.76e-12 | 9 |
gastrointestinal system | 5.76e-11 | 47 |
simple columnar epithelium | 2.92e-10 | 11 |
lymphoid system | 5.01e-10 | 3 |
egg chamber | 2.98e-08 | 1 |