Personal tools

FFCP PHASE1:Mm9::chr18:34532967..34533097,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=13476
|EntrezGene=13476
|HGNC=
|HGNC=
|MCL_coexpression_id=85
|TSSclassifier=NA
|UniProt=G3X8R0,Q9CQG4
|UniProt=G3X8R0,Q9CQG4
|association_with_transcript=0bp_to_ENSMUST00000006027,NM_007874,uc008eki.2_5end
|association_with_transcript=0bp_to_ENSMUST00000006027,NM_007874,uc008eki.2_5end
|cluster_id=chr18:34532967..34533097,-
|description=CAGE_peak_1_at_Reep5_5end
|description=CAGE_peak_1_at_Reep5_5end
|id=chr18:34532967..34533097,-
|id=chr18:34532967..34533097,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001264!8.91e-09!12;UBERON:0003922!8.91e-09!12;UBERON:0002114!8.91e-09!12;UBERON:0003923!8.91e-09!12;UBERON:0003924!8.91e-09!12;UBERON:0003921!8.91e-09!12;UBERON:0002075!1.95e-08!19;UBERON:0001045!6.82e-08!13;UBERON:0004121!1.46e-07!102;UBERON:0000924!1.46e-07!102;UBERON:0006601!1.46e-07!102
|ontology_enrichment_uberon_v019_2=UBERON:0010314,6.14e-09,92;UBERON:0001264,8.91e-09,12;UBERON:0002075,1.95e-08,19;UBERON:0000073,4.07e-07,54
|phase1_expression=115.307169915452,10.4692622291808,13.1949779422965,1.20985684522732,1.50268718983904,52.0425742926858,39.4805362606438,81.4768170916346,29.56563165185,33.7052917903671,14.5535272991679,17.310558501988,46.0529963514943,50.7912538054375,115.255977588219,140.922786103319,249.743590491748,99.0551199224866,97.7625911608917,110.765699119286,117.189653828174,94.6242764944437,91.1587264094885,43.3579465770132,67.446328633748,14.9300310669905,25.4149577733854,23.4863643627619,22.9928337542212,21.926621289114,47.2285987695799,83.1890182232117,94.7199772880238,110.937176710807,5.77703239502549,7.14808975041517,5.9209113316087,208.42875210698,288.312742129282,164.909979351746,169.998900040963,172.127462209528,197.117203330648,180.158346523051,190.183122967809,158.951487372016,262.883491700941,140.190175552627,327.991470822566,305.060511647551,170.643447961317,172.503077237966,83.7235204228104,57.3036092188962,39.9951620979532,192.687317590924,197.994606997681,186.157625312157,160.234637000801,159.226284760882,121.695629473186,232.447348999425,239.220300153896,457.149056378951,495.422047646054,480.99503781851,277.729302450561,368.465354803371,52.5706334403982,66.0179038441967,63.307813366766,398.197472258902,352.727059899727,72.8820255328977,69.2962755461849,67.1029714225315,230.142191288722,271.463280769109,252.529140673264,153.647525205676,183.981651284446,135.437476344758,325.806559834612,270.126052815206,265.410556388319,292.860813960826,260.824919223957,205.598588745307,164.628744306342,214.396516022951,79.133005415558,74.8568772973806,91.1161587168386,24.8263468153396,68.8763002494529,45.2507155968309,170.499526039947,339.156341930335,373.05270260972,383.020098769209,104.083287214967,132.176271736747,99.3740434855918,142.213340630666,154.358112240996,149.735680495783,159.745724624672,102.08038846884,173.488382043605,356.706460172774,149.197381018877,246.00810647621,313.406460770984,271.300752994721,253.52125258458,360.03478415952,121.867119093046,506.097749219691,188.422047565323,142.840128503562,165.631138845295,137.219696637268,85.7402101603362,140.827563362554,186.198122357162,95.2854815928046,98.1285869703487,121.180351660668,96.19216189431,281.157030162852,196.725259212009,182.324464915766,259.867358687453,240.883960805171,309.396398349185,265.102223852716,85.8505837258166,135.852411906222,78.3440551144392,198.657111956831,49.5758887687901,62.5333724059046,80.4877720229911,66.4608246655503,61.7091047302544,58.8041976107461,62.0305416585405,140.734633682025,44.1914385512327,57.6773544511849,75.1311300180062,116.173738186615,92.8677812413497,130.942814612335,112.974392887961,64.8851709828288,110.247470408178,114.262470758934,124.747776234665,104.598515130428,87.0091682529867,117.760588195504,150.096162361023,141.079954162889,174.630371788512,191.375436529586,222.666923161684,190.911334770322,291.600054046687,356.735899443874,374.618968911399,381.581967180117,386.62775302754,367.725587403419,235.314452443258,162.48638294689,52.2061677114401,21.4204958997471,46.2835503661458,41.3381275911581,70.6193688045071,113.144457313695,81.3903640472225,82.3676961067381,58.8416036315194,47.4332989605151,71.8818697168771,76.2003287917608,79.545347544601,85.387843822151,46.685818772934,64.1234899879062,118.921773897582,71.7480659189097,60.8621772634634,61.0953983535943,56.4401737657791,72.3100303069184,71.8367061731563,60.0773302276981,85.4073079457079,101.185674415876,44.1714414359852,65.570126546425,59.5573755193005,78.2520151099291,75.8696853993001,102.259115735025,98.0309529358466,104.146001757193,121.925690534827,95.5473717894524,94.887016308054,99.3616330274904,65.5279113540577,45.4641980304801,50.2312757861354,55.9634484781506,166.277871149944,59.8792861194732,54.2673371551946,59.7502701928662,58.2031815755485,73.0327282446317,92.3609326637733,113.762916701097,94.896356751927,104.088404134924,106.834695000516,118.637039854194,143.328534948693,144.070462347186,269.916398251297,309.482334092846,280.79739989387,238.961222299898,313.073650476194,340.49994955035,84.7543667597412,249.188805150716,57.4224959337587,69.8885352290983,65.2732895130381,49.7055099741308,56.3680645428457,45.2922449262132,60.7216052512342,77.740058204409,65.2224833611764,179.297294563368,132.00427924369,95.0870323583143,93.1713407502455,105.41590857945,1493.38280632458,194.710070196295,519.694194422407,1344.75421865955,1726.92546956676,1201.14912301692,283.495837605539,542.755858109916,703.72582493144,793.252262418898,1135.35841435274,1130.36555400013,163.070571156064,50.4171063287669,63.3857550535497,65.3727956846356,70.0493922886981,109.340085190069,127.19639292544,176.285205537353,130.477469683423,222.847338548739,190.757064317542,254.584374541645,135.791582851257,158.381740861337,182.759058668802,162.335349847866,73.4531708307224,297.978460330889,182.490100692107,180.794896335783,98.7086830880563,134.11834138734,144.895881384287,175.472858849403,61.8721485177633,59.1994643329073,72.5549862473225,284.491844168504,54.5679588927458,169.568435583792,115.565714679327,92.2079385423807,114.640345966743,141.472699357677,125.798559613961,180.61159996898,59.8821176608083,742.500479138876,29.8757257502621,63.245498976603,77.930949005293,93.919923970175,96.2240684909097,85.322843372843,98.8147949397248,79.4246747548096,56.5191866454581,35.7544498822489,57.0299412390574,78.05474679516,83.1173382689673,65.2214577996653,57.2950829332076,70.3574913973202,75.4989148168807,73.9202014547808,74.5832112231615,62.4982325179034,73.8443956486948,71.2841128917462,69.5849268481832,63.6922391658981,67.5548494609469,156.897425461726,120.538372682117,99.2235254100801,149.753077796758,193.18959403219,161.219246412565,126.55777236868,159.704442413904,218.183865255383,193.145130175037,173.082288926699,200.513429703789,164.97905504994,162.364557185642,162.409687938786,174.830827560038,162.565954363944,180.803821184698,178.109547242626,19.8233833885777,77.011800566399,71.7081144167364,95.2978330907713,52.6129038196236,77.0304300405559,105.567195705767,110.846860794525,108.149773632442,104.616645670212,99.363885556974,111.478167759171,114.991771173016,115.437349785979,124.692403102636,111.452723760239,124.57565039072,113.623530853122,95.1918430855638,93.9129110457455,101.489298706083,105.775580470965,106.342540716505,107.556348307923,108.414006238461,104.837499177787,107.927503994936,104.175605729386,108.235878735152,93.1496170951846,117.211397906684,116.924820579794,96.5785261880467,106.596546735945,118.058845920459,148.137672717202,123.983752476066,143.104121996167,184.210663782296,201.399965656118,227.230478908013
|phase1_expression=115.307169915452,10.4692622291808,13.1949779422965,1.20985684522732,1.50268718983904,52.0425742926858,39.4805362606438,81.4768170916346,29.56563165185,33.7052917903671,14.5535272991679,17.310558501988,46.0529963514943,50.7912538054375,115.255977588219,140.922786103319,249.743590491748,99.0551199224866,97.7625911608917,110.765699119286,117.189653828174,94.6242764944437,91.1587264094885,43.3579465770132,67.446328633748,14.9300310669905,25.4149577733854,23.4863643627619,22.9928337542212,21.926621289114,47.2285987695799,83.1890182232117,94.7199772880238,110.937176710807,5.77703239502549,7.14808975041517,5.9209113316087,208.42875210698,288.312742129282,164.909979351746,169.998900040963,172.127462209528,197.117203330648,180.158346523051,190.183122967809,158.951487372016,262.883491700941,140.190175552627,327.991470822566,305.060511647551,170.643447961317,172.503077237966,83.7235204228104,57.3036092188962,39.9951620979532,192.687317590924,197.994606997681,186.157625312157,160.234637000801,159.226284760882,121.695629473186,232.447348999425,239.220300153896,457.149056378951,495.422047646054,480.99503781851,277.729302450561,368.465354803371,52.5706334403982,66.0179038441967,63.307813366766,398.197472258902,352.727059899727,72.8820255328977,69.2962755461849,67.1029714225315,230.142191288722,271.463280769109,252.529140673264,153.647525205676,183.981651284446,135.437476344758,325.806559834612,270.126052815206,265.410556388319,292.860813960826,260.824919223957,205.598588745307,164.628744306342,214.396516022951,79.133005415558,74.8568772973806,91.1161587168386,24.8263468153396,68.8763002494529,45.2507155968309,170.499526039947,339.156341930335,373.05270260972,383.020098769209,104.083287214967,132.176271736747,99.3740434855918,142.213340630666,154.358112240996,149.735680495783,159.745724624672,102.08038846884,173.488382043605,356.706460172774,149.197381018877,246.00810647621,313.406460770984,271.300752994721,253.52125258458,360.03478415952,121.867119093046,506.097749219691,188.422047565323,142.840128503562,165.631138845295,137.219696637268,85.7402101603362,140.827563362554,186.198122357162,95.2854815928046,98.1285869703487,121.180351660668,96.19216189431,281.157030162852,196.725259212009,182.324464915766,259.867358687453,240.883960805171,309.396398349185,265.102223852716,85.8505837258166,135.852411906222,78.3440551144392,198.657111956831,49.5758887687901,62.5333724059046,80.4877720229911,66.4608246655503,61.7091047302544,58.8041976107461,62.0305416585405,140.734633682025,44.1914385512327,57.6773544511849,75.1311300180062,116.173738186615,92.8677812413497,130.942814612335,112.974392887961,64.8851709828288,110.247470408178,114.262470758934,124.747776234665,104.598515130428,87.0091682529867,117.760588195504,150.096162361023,141.079954162889,174.630371788512,191.375436529586,222.666923161684,190.911334770322,291.600054046687,356.735899443874,374.618968911399,381.581967180117,386.62775302754,367.725587403419,235.314452443258,162.48638294689,52.2061677114401,21.4204958997471,46.2835503661458,41.3381275911581,70.6193688045071,113.144457313695,81.3903640472225,82.3676961067381,58.8416036315194,47.4332989605151,71.8818697168771,76.2003287917608,79.545347544601,85.387843822151,46.685818772934,64.1234899879062,118.921773897582,71.7480659189097,60.8621772634634,61.0953983535943,56.4401737657791,72.3100303069184,71.8367061731563,60.0773302276981,85.4073079457079,101.185674415876,44.1714414359852,65.570126546425,59.5573755193005,78.2520151099291,75.8696853993001,102.259115735025,98.0309529358466,104.146001757193,121.925690534827,95.5473717894524,94.887016308054,99.3616330274904,65.5279113540577,45.4641980304801,50.2312757861354,55.9634484781506,166.277871149944,59.8792861194732,54.2673371551946,59.7502701928662,58.2031815755485,73.0327282446317,92.3609326637733,113.762916701097,94.896356751927,104.088404134924,106.834695000516,118.637039854194,143.328534948693,144.070462347186,269.916398251297,309.482334092846,280.79739989387,238.961222299898,313.073650476194,340.49994955035,84.7543667597412,249.188805150716,57.4224959337587,69.8885352290983,65.2732895130381,49.7055099741308,56.3680645428457,45.2922449262132,60.7216052512342,77.740058204409,65.2224833611764,179.297294563368,132.00427924369,95.0870323583143,93.1713407502455,105.41590857945,1493.38280632458,194.710070196295,519.694194422407,1344.75421865955,1726.92546956676,1201.14912301692,283.495837605539,542.755858109916,703.72582493144,793.252262418898,1135.35841435274,1130.36555400013,163.070571156064,50.4171063287669,63.3857550535497,65.3727956846356,70.0493922886981,109.340085190069,127.19639292544,176.285205537353,130.477469683423,222.847338548739,190.757064317542,254.584374541645,135.791582851257,158.381740861337,182.759058668802,162.335349847866,73.4531708307224,297.978460330889,182.490100692107,180.794896335783,98.7086830880563,134.11834138734,144.895881384287,175.472858849403,61.8721485177633,59.1994643329073,72.5549862473225,284.491844168504,54.5679588927458,169.568435583792,115.565714679327,92.2079385423807,114.640345966743,141.472699357677,125.798559613961,180.61159996898,59.8821176608083,742.500479138876,29.8757257502621,63.245498976603,77.930949005293,93.919923970175,96.2240684909097,85.322843372843,98.8147949397248,79.4246747548096,56.5191866454581,35.7544498822489,57.0299412390574,78.05474679516,83.1173382689673,65.2214577996653,57.2950829332076,70.3574913973202,75.4989148168807,73.9202014547808,74.5832112231615,62.4982325179034,73.8443956486948,71.2841128917462,69.5849268481832,63.6922391658981,67.5548494609469,156.897425461726,120.538372682117,99.2235254100801,149.753077796758,193.18959403219,161.219246412565,126.55777236868,159.704442413904,218.183865255383,193.145130175037,173.082288926699,200.513429703789,164.97905504994,162.364557185642,162.409687938786,174.830827560038,162.565954363944,180.803821184698,178.109547242626,19.8233833885777,77.011800566399,71.7081144167364,95.2978330907713,52.6129038196236,77.0304300405559,105.567195705767,110.846860794525,108.149773632442,104.616645670212,99.363885556974,111.478167759171,114.991771173016,115.437349785979,124.692403102636,111.452723760239,124.57565039072,113.623530853122,95.1918430855638,93.9129110457455,101.489298706083,105.775580470965,106.342540716505,107.556348307923,108.414006238461,104.837499177787,107.927503994936,104.175605729386,108.235878735152,93.1496170951846,117.211397906684,116.924820579794,96.5785261880467,106.596546735945,118.058845920459,148.137672717202,123.983752476066,143.104121996167,184.210663782296,201.399965656118,227.230478908013
|short_description=p1@Reep5
|short_description=p1@Reep5
}}
}}

Latest revision as of 04:11, 27 September 2015

Short description:p1@Reep5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Reep5_5end
Coexpression cluster:MCL_coexpression_mm9:85
Association with transcript: 0bp_to_ENSMUST00000006027, NM_007874, uc008eki.2_5end
EntrezGene:Reep5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Reep5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7115.31
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I510.47
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I613.19
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I752.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I839.48
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E981.48
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E729.57
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F233.71
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E614.55
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F117.31
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E446.05
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E850.79
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1115.26
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3140.92
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5249.74
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A299.06
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A497.76
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6110.77
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3117.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H294.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I991.16
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D143.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D267.45
GP2+ M cell, pool1.CNhs13228.11845-124H914.93
GP2+ M cell, pool2.CNhs13231.11846-124I125.41
GP2+ M cell, pool3.CNhs13240.11847-124I223.49
Ileum epithelium, pool1.CNhs13199.10252-104B922.99
Ileum epithelium, pool2.CNhs13232.10253-104C121.93
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C847.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I383.19
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G694.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9110.94
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.78
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F67.15
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.92
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8208.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1288.31
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3164.91
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9170.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2172.13
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4197.12
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8180.16
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9190.18
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3158.95
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7262.88
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2140.19
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8327.99
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3305.06
Mouse Astrocytes, donor2.CNhs12078.11552-120C4170.64
Mouse Astrocytes, donor3.CNhs12107.11633-122C4172.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A283.72
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I957.30
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A140.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1192.69
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1197.99
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5186.16
Mouse Granule cells, donor1.CNhs12131.11713-123C3160.23
Mouse Granule cells, donor2.CNhs12357.11731-123E3159.23
Mouse Granule cells, donor3.CNhs12108.11636-122C7121.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6232.45
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1239.22
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7457.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7495.42
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2481.00
Mouse Microglia, donor1.CNhs12629.11718-123C8277.73
Mouse Microglia, donor2.CNhs12634.11736-123E8368.47
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D552.57
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F566.02
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D963.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1398.20
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5352.73
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D272.88
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F269.30
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D667.10
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3230.14
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3271.46
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7252.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4153.65
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4183.98
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8135.44
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4325.81
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5270.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6265.41
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6292.86
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6260.82
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1205.60
Mouse Schwann, donor1.CNhs12507.11728-123D9164.63
Mouse Schwann, donor2.CNhs12573.11746-123F9214.40
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G379.13
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F774.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C491.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C824.83
Mouse hepatocyte, donor6.CNhs13090.11822-124F468.88
Mouse hepatocyte, donor8.CNhs13091.11824-124F645.25
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7170.50
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7339.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3373.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8383.02
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6104.08
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1132.18
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I899.37
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6142.21
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1154.36
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2149.74
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3159.75
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6102.08
accessory axillary lymph node, adult.CNhs10475.1063-29H9173.49
adrenal gland, adult.CNhs10508.49-24D7356.71
adrenal gland, embryo E14.CNhs11038.406-44C5149.20
adrenal gland, embryo E16.CNhs11004.1254-43D6246.01
adrenal gland, embryo E17.CNhs11043.1263-45I1313.41
adrenal gland, embryo E18.CNhs11026.1262-18F5271.30
adrenal gland, neonate N00.CNhs11191.1311-23C1253.52
adrenal gland, neonate N25.CNhs11223.1377-27I3360.03
amnion, adult pregnant day17.5.CNhs10488.583-22A8121.87
aorta, adult.CNhs10498.46-23H1506.10
bone (os femoris), adult.CNhs10483.56-12G2188.42
bone (os femoris), neonate N02.CNhs11227.1985-43F5142.84
bone (os femoris), neonate N16.CNhs11225.1525-43A6165.63
bone (os femoris), neonate N20.CNhs11195.1350-25C3137.22
cecum, adult.CNhs10467.37-13H485.74
cerebellum, adult.CNhs10494.15-8B2140.83
cerebellum, neonate N30.CNhs11135.1395-42I2186.20
colon, adult.CNhs10468.36-18H795.29
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C798.13
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1121.18
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D496.19
corpora quadrigemina, adult.CNhs10501.16-22A4281.16
corpus striatum, adult.CNhs10487.19-21D8196.73
corpus striatum, neonate N00.CNhs11226.630-43F1182.32
cortex, adult.CNhs10473.12-14D5259.87
cortex, neonate N30.CNhs11107.1392-42F2240.88
diencephalon, adult.CNhs10482.20-12F2309.40
diencephalon, neonate N30.CNhs11201.1388-42B2265.10
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B185.85
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2135.85
epididymis, adult.CNhs10490.58-23B278.34
eyeball, adult.CNhs10484.31-12G4198.66
eyeball, embryo E12.CNhs11016.345-16C649.58
eyeball, embryo E14.CNhs10521.399-16E262.53
eyeball, embryo E15.CNhs10593.426-16C980.49
eyeball, embryo E17.CNhs11023.1261-18D466.46
eyeball, neonate N00.CNhs11207.633-15C661.71
eyeball, neonate N01.CNhs11140.1532-43E758.80
eyeball, neonate N02.CNhs11205.1551-44G862.03
eyeball, neonate N16.CNhs11188.777-19A2140.73
forelimb, embryo E11.CNhs10596.335-25E244.19
forelimb, embryo E12.CNhs10600.359-14H257.68
forelimb, embryo E13.CNhs10589.384-1E275.13
forelimb, embryo E14.CNhs10577.413-26A8116.17
forelimb, embryo E15.CNhs11007.437-20E792.87
forelimb, embryo E17.CNhs10598.1517-43C4130.94
forelimb, embryo E18.CNhs11008.1520-43B5112.97
gonad, embryo E13.CNhs11044.1564-45I664.89
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8110.25
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2114.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5124.75
heart, embryo E11.CNhs10586.331-24E9104.60
heart, embryo E12.CNhs11015.353-12F587.01
heart, embryo E13.CNhs11013.376-3I9117.76
heart, embryo E14.CNhs10597.403-26D4150.10
heart, embryo E15.CNhs11017.431-16C8141.08
heart, embryo E16.CNhs11021.457-17C6174.63
heart, embryo E17.CNhs11025.479-18E5191.38
heart, embryo E18.CNhs11030.1283-20G3222.67
heart, neonate N00.CNhs11213.639-21E3190.91
heart, neonate N03.CNhs11221.1349-25I2291.60
heart, neonate N10.CNhs11118.749-24G1356.74
heart, neonate N16.CNhs11209.782-15G1374.62
heart, neonate N20.CNhs11127.821-26I6381.58
heart, neonate N25.CNhs11196.1351-25D3386.63
heart, neonate N30.CNhs11202.1390-42D2367.73
hippocampus, adult.CNhs10478.13-16E8235.31
hippocampus, neonate N00.CNhs11228.627-43G1162.49
intestinal mucosa, adult.CNhs10506.860-29I352.21
intestine, adult.CNhs10496.178-9A321.42
intestine, embryo E12.CNhs11019.1251-16I546.28
intestine, embryo E13.CNhs11010.381-16D541.34
intestine, embryo E15.CNhs10602.976-16D870.62
intestine, embryo E16.CNhs10585.463-22H4113.14
intestine, embryo E17.CNhs10582.482-18D381.39
intestine, embryo E18.CNhs10526.1289-20F782.37
intestine, neonate N00.CNhs11126.644-26D158.84
intestine, neonate N01.CNhs11192.1322-23E947.43
intestine, neonate N06.CNhs11102.688-20B871.88
intestine, neonate N07.CNhs11095.720-20F276.20
intestine, neonate N10.CNhs11098.755-23A579.55
intestine, neonate N20.CNhs11187.827-18D185.39
intestine, neonate N25.CNhs11121.1352-25E346.69
intestine, neonate N30.CNhs11131.1384-42G164.12
kidney, embryo E14.CNhs10606.411-4I9118.92
kidney, embryo E15.CNhs10997.434-16F871.75
kidney, embryo E16.CNhs10584.464-22A560.86
kidney, embryo E17.CNhs11028.483-18I261.10
kidney, embryo E18.CNhs11001.1288-20C756.44
kidney, neonate N00.CNhs11214.646-21G772.31
kidney, neonate N10.CNhs11206.758-6D571.84
kidney, neonate N20.CNhs11113.832-19I160.08
kidney, neonate N25.CNhs11122.1353-25F385.41
kidney, neonate N30.CNhs11203.1385-42H1101.19
liver, adult pregnant day01.CNhs10466.508-5B244.17
liver, embryo E12.CNhs10601.355-15F865.57
liver, embryo E13.CNhs10524.378-3H659.56
liver, embryo E14.CNhs10594.409-16E178.25
liver, embryo E15.CNhs10520.433-16D775.87
liver, embryo E16.CNhs10523.462-17F5102.26
liver, embryo E17.CNhs10510.481-18A398.03
liver, embryo E18.CNhs10579.499-43G4104.15
liver, neonate N00.CNhs11117.641-24F4121.93
liver, neonate N03.CNhs11123.1345-25G295.55
liver, neonate N06.CNhs11101.684-20A894.89
liver, neonate N07.CNhs11103.716-20H299.36
liver, neonate N10.CNhs11115.751-24B965.53
liver, neonate N20.CNhs11220.823-25A345.46
liver, neonate N25.CNhs11198.1368-26H150.23
liver, neonate N30.CNhs11106.1382-42D155.96
lung, adult.CNhs10474.28-22B1166.28
lung, embryo E12.CNhs10522.354-16G259.88
lung, embryo E14.CNhs10604.404-26F854.27
lung, embryo E15.CNhs11020.432-17C559.75
lung, embryo E16.CNhs10998.458-17B658.20
lung, embryo E17.CNhs10605.480-44A673.03
lung, embryo E18.CNhs10583.1287-20I692.36
lung, neonate N00.CNhs11224.640-42C6113.76
lung, neonate N06.CNhs11212.683-20E594.90
lung, neonate N07.CNhs11111.715-19A3104.09
lung, neonate N10.CNhs11219.750-23E6106.83
lung, neonate N20.CNhs11109.822-18A4118.64
lung, neonate N25.CNhs11119.1359-25C7143.33
lung, neonate N30.CNhs11133.1394-42H2144.07
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1269.92
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1309.48
mammary gland, adult lactating day02.CNhs10480.595-22B6280.80
mammary gland, adult pregnant day19.CNhs10476.588-5H2238.96
medulla oblongata, adult.CNhs10477.17-12C2313.07
medulla oblongata, neonate N30.CNhs11200.1396-42A3340.50
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C784.75
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2249.19
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E157.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E269.89
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E365.27
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D749.71
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D856.37
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D945.29
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D460.72
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D577.74
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D665.22
olfactory brain, adult.CNhs10489.18-22I9179.30
ovary, adult.CNhs10507.91-2I7132.00
ovary, embryo E18.CNhs11040.505-44H795.09
ovary, neonate N00.CNhs11217.1299-22I493.17
oviduct, adult pregnant day01.CNhs10500.988-6G6105.42
pancreas, adult.CNhs10486.34-16E41493.38
pancreas, embryo E14.CNhs11012.405-44F4194.71
pancreas, embryo E15.CNhs11042.1556-45F2519.69
pancreas, embryo E16.CNhs11003.460-26E51344.75
pancreas, embryo E17.CNhs10599.1558-45G31726.93
pancreas, embryo E18.CNhs10580.1535-43I71201.15
pancreas, neonate N00.CNhs11105.645-26G9283.50
pancreas, neonate N01.CNhs11138.1531-43D7542.76
pancreas, neonate N02.CNhs11139.1539-43D8703.73
pancreas, neonate N16.CNhs11136.787-43B6793.25
pancreas, neonate N25.CNhs11094.1555-45E21135.36
pancreas, neonate N30.CNhs11182.1548-44H51130.37
pituitary gland, adult.CNhs10493.21-1G8163.07
pituitary gland, embryo E12.CNhs11018.346-16E650.42
pituitary gland, embryo E13.CNhs11009.370-44C763.39
pituitary gland, embryo E14.CNhs11037.398-44A565.37
pituitary gland, embryo E15.CNhs10592.427-16B970.05
pituitary gland, embryo E16.CNhs11036.449-43F6109.34
pituitary gland, embryo E17.CNhs11039.1265-44F5127.20
pituitary gland, neonate N00.CNhs11190.1308-22E9176.29
placenta, adult pregnant day10.CNhs10472.539-13I7130.48
placenta, adult pregnant day17.CNhs10464.577-18G3222.85
prostate, adult.CNhs10470.859-1F8190.76
skin, adult.CNhs10492.30-1C3254.58
skin, neonate N00.CNhs11124.650-25G4135.79
skin, neonate N03.CNhs11215.662-22H3158.38
skin, neonate N06.CNhs11097.693-20I5182.76
skin, neonate N10.CNhs11108.762-6C4162.34
small intestine, neonate N16.CNhs11114.790-21I173.45
spinal cord, adult.CNhs10505.24-13C9297.98
spleen, adult.CNhs10465.25-2G2182.49
spleen, embryo E16.CNhs11035.461-43C1180.79
spleen, embryo E18.CNhs11011.1271-21F298.71
spleen, neonate N10.CNhs11116.752-24D1134.12
spleen, neonate N20.CNhs11112.824-19H1144.90
spleen, neonate N25.CNhs11099.1354-25G3175.47
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C661.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C959.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D372.55
stomach, adult.CNhs10503.33-1H6284.49
stomach, embryo E12.CNhs10588.356-43E354.57
stomach, embryo E15.CNhs10603.1252-16G8169.57
stomach, embryo E16.CNhs11022.459-17D4115.57
stomach, embryo E17.CNhs11006.1035-18D592.21
stomach, embryo E18.CNhs10999.1286-20C6114.64
stomach, neonate N03.CNhs11193.1340-24B8141.47
stomach, neonate N07.CNhs11210.718-18A9125.80
stomach, neonate N25.CNhs11104.1355-25E4180.61
stomach, neonate N30.CNhs11134.1386-42I159.88
submandibular gland, adult.CNhs10469.59-29C1742.50
testis, adult.CNhs10504.57-7G529.88
testis, embryo E13.CNhs11031.389-23F563.25
testis, embryo E15.CNhs11034.443-27C577.93
testis, embryo E16.CNhs11033.470-26G593.92
testis, embryo E17.CNhs11029.486-18I596.22
testis, embryo E18.CNhs11027.503-18G585.32
testis, neonate N00.CNhs11189.1300-22B798.81
testis, neonate N07.CNhs11222.726-26I479.42
testis, neonate N10.CNhs11204.763-44D956.52
testis, neonate N20.CNhs11110.839-18H335.75
testis, neonate N30.CNhs11130.1391-42E257.03
thymus, adult.CNhs10471.38-12B578.05
thymus, embryo E14.CNhs11041.402-44I483.12
thymus, embryo E15.CNhs11005.430-45I265.22
thymus, embryo E16.CNhs11002.456-26C557.30
thymus, embryo E17.CNhs10581.478-18C170.36
thymus, embryo E18.CNhs10595.1273-19G475.50
thymus, neonate N02.CNhs11181.1541-43F873.92
thymus, neonate N03.CNhs11137.2104-43C774.58
thymus, neonate N06.CNhs11197.681-26C462.50
thymus, neonate N07.CNhs11211.713-19D373.84
thymus, neonate N10.CNhs11194.748-24E471.28
thymus, neonate N20.CNhs11186.820-7A269.58
thymus, neonate N25.CNhs11125.1362-25G763.69
thymus, neonate N30.CNhs11132.1393-42G267.55
tongue, adult.CNhs10499.32-1B4156.90
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3120.54
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F799.22
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5149.75
urinary bladder, adult.CNhs10481.879-12E4193.19
uterus, adult pregnant day19.CNhs10497.590-15F5161.22
uterus, adult.CNhs10509.92-27E5126.56
vagina, adult.CNhs10502.89-27D5159.70
vesicular gland, adult.CNhs10491.51-27F8218.18
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1193.15
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2173.08
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3200.51
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7164.98
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4162.36
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5162.41
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6174.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7162.57
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8180.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9178.11
whole body, embryo E11.CNhs11014.324-5I819.82
whole body, embryo E12.CNhs10587.857-27C977.01
whole body, embryo E13.CNhs10512.372-23H271.71
whole body, embryo E14.5.CNhs10578.420-27D295.30
whole body, embryo E14.CNhs10519.395-14B152.61
whole body, embryo E16.CNhs10514.453-14F277.03
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5105.57
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5110.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5108.15
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5104.62
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G599.36
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5111.48
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5114.99
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5115.44
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5124.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5111.45
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5124.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5113.62
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G595.19
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G593.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5101.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5105.78
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5106.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5107.56
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5108.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5104.84
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5107.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5104.18
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5108.24
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G593.15
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5117.21
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5116.92
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G596.58
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5106.60
whole body, embryo E17.5.CNhs10513.490-9F9118.06
whole body, embryo E17.CNhs10517.475-3I5148.14
whole body, embryo E18.CNhs10516.493-3B3123.98
whole body, neonate N00.CNhs10525.657-19C2143.10
whole body, neonate N01.CNhs10576.659-23C6184.21
whole body, neonate N06.CNhs10515.692-21D1201.40
whole body, neonate N10.CNhs10518.761-6B4227.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest6.14e-0992
pancreas8.91e-0912
viscus1.95e-0819
regional part of nervous system4.07e-0754
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr18:34532967..34533097,-&oldid=4292025"