FFCP PHASE1:Mm9::chr19:20567527..20567549,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2251 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:20567527..20567549,+ | |||
|description=CAGE_peak_at_chr19:20567527..20567549,+ | |description=CAGE_peak_at_chr19:20567527..20567549,+ | ||
|id=chr19:20567527..20567549,+ | |id=chr19:20567527..20567549,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,3.08e-07,3;CL:0000737,3.08e-07,3;CL:0000746,3.08e-07,3;CL:0000513,3.08e-07,3;CL:0002614,9.47e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.13e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.53e-09,51;UBERON:0002950,1.46e-08,4;UBERON:0001891,1.46e-08,4;UBERON:0009616,1.46e-08,4;UBERON:0010286,1.46e-08,4;UBERON:0002038,9.47e-07,3;UBERON:0009663,9.47e-07,3;UBERON:0009661,9.47e-07,3;UBERON:0000125,9.47e-07,3;UBERON:0002308,9.47e-07,3 | |||
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| ||
|short_description=p@chr19:20567527..20567549,+ | |short_description=p@chr19:20567527..20567549,+ | ||
}} | }} |
Latest revision as of 09:20, 6 August 2015
Short description: | p@chr19:20567527..20567549, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:20567527..20567549, + |
Coexpression cluster: | MCL_coexpression_mm9:2251 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 3.08e-07 | 3 |
striated muscle cell | 3.08e-07 | 3 |
cardiac muscle cell | 3.08e-07 | 3 |
cardiac muscle myoblast | 3.08e-07 | 3 |
neuron of the substantia nigra | 9.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.53e-09 | 51 |
regional part of midbrain | 1.46e-08 | 4 |
midbrain | 1.46e-08 | 4 |
presumptive midbrain | 1.46e-08 | 4 |
midbrain neural tube | 1.46e-08 | 4 |
substantia nigra | 9.47e-07 | 3 |
telencephalic nucleus | 9.47e-07 | 3 |
midbrain nucleus | 9.47e-07 | 3 |
neural nucleus | 9.47e-07 | 3 |
nucleus of brain | 9.47e-07 | 3 |