FFCP PHASE1:Hg19::chr11:621654..621664,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:621654..621664,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_at_chr11:621654..621664,- | |description=CAGE_peak_at_chr11:621654..621664,- | ||
|id=chr11:621654..621664,- | |id=chr11:621654..621664,- | ||
|ontology_enrichment_celltype=CL:0002563!1.62e-10!4 | |ontology_enrichment_celltype=CL:0002563!1.62e-10!4 | ||
|ontology_enrichment_celltype_v019=CL:0002563;1.13e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.13e-13,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.12e-26!27;UBERON:0005409!1.73e-20!35;UBERON:0000059!3.18e-14!11;UBERON:0002146!7.46e-11!1;UBERON:0005623!7.46e-11!1;UBERON:0002108!1.42e-10!14;UBERON:0001242!1.62e-10!4;UBERON:0001262!1.62e-10!4;UBERON:0004786!1.62e-10!4;UBERON:0004808!1.62e-10!4;UBERON:0001277!1.62e-10!4;UBERON:0001052!1.78e-10!4;UBERON:0001155!3.81e-10!9;UBERON:0003350!1.37e-08!5;UBERON:0004907!1.48e-08!5;UBERON:0004921!2.85e-07!129;UBERON:0004185!2.85e-07!129;UBERON:0001007!5.52e-07!155;UBERON:0001555!5.52e-07!155;UBERON:0007026!5.52e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;8.97e-89;4!UBERON:0000160;2.03e-44;17!UBERON:0005409;5.16e-35;22!UBERON:0004921;1.31e-20;33!UBERON:0002114;9.45e-18;2!UBERON:0001242;1.13e-13;4!UBERON:0001262;1.13e-13;4!UBERON:0004786;1.13e-13;4!UBERON:0004808;1.13e-13;4!UBERON:0001277;1.13e-13;4!UBERON:0001555;2.21e-10;54!UBERON:0000485;2.18e-08;7!UBERON:0003929;2.18e-08;7!UBERON:0003350;1.69e-07;8!UBERON:0001007;2.60e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,8.98e-89,4;UBERON:0000160,2.03e-44,17;UBERON:0005409,4.21e-31,25;UBERON:0002114,1.12e-17,2;UBERON:0001242,1.13e-13,4;UBERON:0001262,1.13e-13,4;UBERON:0004786,1.13e-13,4;UBERON:0004808,1.13e-13,4;UBERON:0001277,1.13e-13,4;UBERON:0003350,1.69e-07,8;UBERON:0004921,1.75e-07,118;UBERON:0000485,8.37e-07,9 | |||
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|short_description=p@chr11:621654..621664,- | |short_description=p@chr11:621654..621664,- | ||
}} | }} |
Latest revision as of 23:38, 23 July 2015
Short description: | p@chr11:621654..621664, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:621654..621664, - |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.13e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
small intestine | 8.98e-89 | 4 |
intestine | 2.03e-44 | 17 |
gastrointestinal system | 4.21e-31 | 25 |
duodenum | 1.12e-17 | 2 |
intestinal mucosa | 1.13e-13 | 4 |
wall of intestine | 1.13e-13 | 4 |
gastrointestinal system mucosa | 1.13e-13 | 4 |
gastrointestinal system epithelium | 1.13e-13 | 4 |
intestinal epithelium | 1.13e-13 | 4 |
epithelium of mucosa | 1.69e-07 | 8 |
subdivision of digestive tract | 1.75e-07 | 118 |
simple columnar epithelium | 8.37e-07 | 9 |