FFCP PHASE1:Hg19::chr11:64126614..64126665,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8986 | |EntrezGene=8986 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10433 | |HGNC=10433 | ||
|TSSclassifier=strong | |||
|UniProt=G3XAA9,O75676,E9PJN1,E9PKU3,A0PJF8 | |UniProt=G3XAA9,O75676,E9PJN1,E9PKU3,A0PJF8 | ||
|association_with_transcript=0bp_to_ENST00000294261,ENST00000334205,ENST00000528057,ENST00000528355,ENST00000530383,ENST00000531659,NM_001006944,NM_003942,uc001oad.2,uc001oae.2,uc001oaf.2,uc009ypp.2,uc010rnl.1_5end | |association_with_transcript=0bp_to_ENST00000294261,ENST00000334205,ENST00000528057,ENST00000528355,ENST00000530383,ENST00000531659,NM_001006944,NM_003942,uc001oad.2,uc001oae.2,uc001oaf.2,uc009ypp.2,uc010rnl.1_5end | ||
|cluster_id=chr11:64126614..64126665,+ | |||
|description=CAGE_peak_1_at_RPS6KA4_5end | |description=CAGE_peak_1_at_RPS6KA4_5end | ||
|id=chr11:64126614..64126665,+ | |id=chr11:64126614..64126665,+ | ||
|ontology_enrichment_celltype=CL:0000548!3.72e-14!679;CL:0000004!3.72e-14!679;CL:0000255!3.72e-14!679;CL:0000012!1.33e-13!682;CL:0000003!1.72e-13!722;CL:0002371!2.02e-13!591;CL:0000144!5.84e-13!625;CL:0000220!1.80e-12!246;CL:0002321!8.58e-12!248;CL:0000222!1.46e-11!119;CL:0000063!2.40e-11!578;CL:0000076!9.34e-11!62;CL:0000066!1.14e-10!254;CL:0002076!3.01e-08!43;CL:0000213!4.58e-07!57;CL:0000215!4.58e-07!57 | |ontology_enrichment_celltype=CL:0000548!3.72e-14!679;CL:0000004!3.72e-14!679;CL:0000255!3.72e-14!679;CL:0000012!1.33e-13!682;CL:0000003!1.72e-13!722;CL:0002371!2.02e-13!591;CL:0000144!5.84e-13!625;CL:0000220!1.80e-12!246;CL:0002321!8.58e-12!248;CL:0000222!1.46e-11!119;CL:0000063!2.40e-11!578;CL:0000076!9.34e-11!62;CL:0000066!1.14e-10!254;CL:0002076!3.01e-08!43;CL:0000213!4.58e-07!57;CL:0000215!4.58e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002076;8.18e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.07e-12,250;CL:0000222,6.55e-12,121;CL:0000066,1.29e-10,253;CL:0000076,1.63e-10,63;CL:0002076,1.64e-08,42;CL:0000213,2.25e-07,58;CL:0000215,2.25e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!4.72e-13!216;UBERON:0001637!5.72e-10!42;UBERON:0003509!5.72e-10!42;UBERON:0004572!5.72e-10!42;UBERON:0004872!8.89e-09!84;UBERON:0001981!9.57e-09!60;UBERON:0007500!9.57e-09!60;UBERON:0004537!9.57e-09!60;UBERON:0006965!9.57e-09!60;UBERON:0000055!9.13e-08!69;UBERON:0003914!2.27e-07!118;UBERON:0002049!3.02e-07!79;UBERON:0007798!3.02e-07!79;UBERON:0002204!5.67e-07!167;UBERON:0004573!6.86e-07!33;UBERON:0004571!6.86e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.84e-07;42!UBERON:0003509;1.84e-07;42!UBERON:0004572;1.84e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,4.78e-11,203;UBERON:0001637,5.72e-10,42;UBERON:0003509,5.72e-10,42;UBERON:0004572,5.72e-10,42;UBERON:0007500,5.30e-09,59;UBERON:0001981,5.30e-09,59;UBERON:0004537,5.30e-09,59;UBERON:0006965,5.30e-09,59;UBERON:0004872,5.59e-09,83;UBERON:0000055,5.64e-08,68;UBERON:0002049,2.00e-07,78;UBERON:0007798,2.00e-07,78;UBERON:0003914,2.49e-07,117;UBERON:0000926,5.68e-07,315;UBERON:0004120,5.68e-07,315;UBERON:0006603,5.68e-07,315;UBERON:0004573,6.86e-07,33;UBERON:0004571,6.86e-07,33 | |||
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| ||
|short_description=p1@RPS6KA4 | |short_description=p1@RPS6KA4 | ||
}} | }} |
Latest revision as of 03:22, 19 September 2015
Short description: | p1@RPS6KA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPS6KA4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000294261, ENST00000334205, ENST00000528057, ENST00000528355, ENST00000530383, ENST00000531659, NM_001006944, NM_003942, uc001oad.2, uc001oae.2, uc001oaf.2, uc009ypp.2, uc010rnl.1_5end |
EntrezGene: | RPS6KA4 |
HGNC: | 10433 |
UniProt: | G3XAA9O75676E9PJN1E9PKU3A0PJF8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.07e-12 | 250 |
mesodermal cell | 6.55e-12 | 121 |
epithelial cell | 1.29e-10 | 253 |
squamous epithelial cell | 1.63e-10 | 63 |
endo-epithelial cell | 1.64e-08 | 42 |
lining cell | 2.25e-07 | 58 |
barrier cell | 2.25e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 4.78e-11 | 203 |
artery | 5.72e-10 | 42 |
arterial blood vessel | 5.72e-10 | 42 |
arterial system | 5.72e-10 | 42 |
epithelial tube open at both ends | 5.30e-09 | 59 |
blood vessel | 5.30e-09 | 59 |
blood vasculature | 5.30e-09 | 59 |
vascular cord | 5.30e-09 | 59 |
splanchnic layer of lateral plate mesoderm | 5.59e-09 | 83 |
vessel | 5.64e-08 | 68 |
vasculature | 2.00e-07 | 78 |
vascular system | 2.00e-07 | 78 |
epithelial tube | 2.49e-07 | 117 |
mesoderm | 5.68e-07 | 315 |
mesoderm-derived structure | 5.68e-07 | 315 |
presumptive mesoderm | 5.68e-07 | 315 |
systemic artery | 6.86e-07 | 33 |
systemic arterial system | 6.86e-07 | 33 |