FFCP PHASE1:Hg19::chr12:104674502..104674520,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_ENST00000549807_5end | |association_with_transcript=-2bp_to_ENST00000549807_5end | ||
|cluster_id=chr12:104674502..104674520,- | |||
|coexpression_cluster_id=C1655 | |||
|description=CAGE_peak_5_at_ENST00000549807_5end | |description=CAGE_peak_5_at_ENST00000549807_5end | ||
|id=chr12:104674502..104674520,- | |id=chr12:104674502..104674520,- | ||
|ontology_enrichment_celltype=CL:0000012!3.95e-16!682;CL:0000548!7.05e-16!679;CL:0000004!7.05e-16!679;CL:0000255!7.05e-16!679;CL:0000222!7.41e-13!119;CL:0000003!5.04e-12!722;CL:0000144!7.60e-12!625;CL:0000077!8.68e-12!19;CL:0000057!1.96e-11!75;CL:0000055!3.61e-11!180;CL:0000220!1.06e-08!246;CL:0000213!1.10e-08!57;CL:0000215!1.10e-08!57;CL:0002321!1.84e-08!248;CL:0000063!5.00e-08!578;CL:0002371!1.14e-07!591;CL:0000076!1.79e-07!62;CL:0000192!2.58e-07!42;CL:0000514!2.58e-07!42 | |ontology_enrichment_celltype=CL:0000012!3.95e-16!682;CL:0000548!7.05e-16!679;CL:0000004!7.05e-16!679;CL:0000255!7.05e-16!679;CL:0000222!7.41e-13!119;CL:0000003!5.04e-12!722;CL:0000144!7.60e-12!625;CL:0000077!8.68e-12!19;CL:0000057!1.96e-11!75;CL:0000055!3.61e-11!180;CL:0000220!1.06e-08!246;CL:0000213!1.10e-08!57;CL:0000215!1.10e-08!57;CL:0002321!1.84e-08!248;CL:0000063!5.00e-08!578;CL:0002371!1.14e-07!591;CL:0000076!1.79e-07!62;CL:0000192!2.58e-07!42;CL:0000514!2.58e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000077;5.51e-27;19!CL:0002195;7.17e-10;2!CL:0002571;7.17e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,7.09e-27,19;CL:0000076,5.66e-11,63;CL:0000213,2.87e-10,58;CL:0000215,2.87e-10,58;CL:0002195,4.39e-10,2;CL:0002571,4.39e-10,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000490!9.38e-09!138;UBERON:0002049!4.85e-08!79;UBERON:0007798!4.85e-08!79;UBERON:0004535!2.05e-07!110;UBERON:0000055!6.10e-07!69;UBERON:0001009!6.55e-07!113;UBERON:0001637!7.72e-07!42;UBERON:0003509!7.72e-07!42;UBERON:0004572!7.72e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p5@ENST00000549807 | |short_description=p5@ENST00000549807 | ||
}} | }} |
Latest revision as of 04:17, 24 July 2015
Short description: | p5@ENST00000549807 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ENST00000549807_5end |
Coexpression cluster: | C1655_large_mesothelioma_Fibroblast_giant_oral_mesenchymal_mucinous |
Association with transcript: | -2bp_to_ENST00000549807_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 7.09e-27 | 19 |
squamous epithelial cell | 5.66e-11 | 63 |
lining cell | 2.87e-10 | 58 |
barrier cell | 2.87e-10 | 58 |
hepatic stem cell | 4.39e-10 | 2 |
hepatic mesenchymal stem cell | 4.39e-10 | 2 |