FFCP PHASE1:Mm9::chr17:56511861..56511871,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=193796 | |EntrezGene=193796 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=90 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=143bp_to_ENSMUST00000132363_5end | |association_with_transcript=143bp_to_ENSMUST00000132363_5end | ||
|cluster_id=chr17:56511861..56511871,+ | |||
|description=CAGE_peak_2_at_Kdm4b_5end | |description=CAGE_peak_2_at_Kdm4b_5end | ||
|id=chr17:56511861..56511871,+ | |id=chr17:56511861..56511871,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.95e-08!52;UBERON:0005068!1.95e-08!52;UBERON:0006241!1.95e-08!52;UBERON:0007135!1.95e-08!52;UBERON:0002616!5.63e-08!49;UBERON:0000955!9.49e-08!50;UBERON:0006238!9.49e-08!50;UBERON:0001017!9.27e-07!73;UBERON:0005743!9.27e-07!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001851,1.86e-15,1;UBERON:0005889,1.86e-15,1;UBERON:0000369,1.08e-12,5;UBERON:0002435,1.08e-12,5;UBERON:0000204,1.08e-12,5;UBERON:0010082,1.08e-12,5;UBERON:0002420,2.66e-08,8;UBERON:0007245,2.66e-08,8;UBERON:0010009,2.66e-08,8;UBERON:0010011,2.66e-08,8;UBERON:0000454,2.66e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0.307213066512487,0,0,1.04182674111352,0,0,0.15279824777681,0.294628585473668,0,0.186399445825301,0,0,0,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,16.4700217014706,0,0.695297280769106,1.02286182932132,0.41557608911912,2.92034273521964,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.72927835405207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0,0.685082519770642,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0.307213066512487,0,0,1.04182674111352,0,0,0.15279824777681,0.294628585473668,0,0.186399445825301,0,0,0,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,16.4700217014706,0,0.695297280769106,1.02286182932132,0.41557608911912,2.92034273521964,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.72927835405207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0,0.685082519770642,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0.233931608445408,0,0,0,0 | ||
|short_description=p2@Kdm4b | |short_description=p2@Kdm4b | ||
}} | }} |
Latest revision as of 17:06, 26 September 2015
Short description: | p2@Kdm4b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Kdm4b_5end |
Coexpression cluster: | MCL_coexpression_mm9:90 |
Association with transcript: | 143bp_to_ENSMUST00000132363_5end |
EntrezGene: | Kdm4b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortex | 1.86e-15 | 1 |
zygote cortex | 1.86e-15 | 1 |
corpus striatum | 1.08e-12 | 5 |
striatum | 1.08e-12 | 5 |
ventral part of telencephalon | 1.08e-12 | 5 |
future corpus striatum | 1.08e-12 | 5 |
basal ganglion | 2.66e-08 | 8 |
nuclear complex of neuraxis | 2.66e-08 | 8 |
aggregate regional part of brain | 2.66e-08 | 8 |
collection of basal ganglia | 2.66e-08 | 8 |
cerebral subcortex | 2.66e-08 | 8 |