FFCP PHASE1:Hg19::chr12:16516836..16516885,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:16516836..16516885,+ | |||
|coexpression_cluster_id=C892 | |||
|description=CAGE_peak_at_chr12:16516836..16516885,+ | |description=CAGE_peak_at_chr12:16516836..16516885,+ | ||
|id=chr12:16516836..16516885,+ | |id=chr12:16516836..16516885,+ | ||
|ontology_enrichment_celltype=CL:0000136!6.63e-11!15;CL:0000055!6.34e-08!180 | |ontology_enrichment_celltype=CL:0000136!6.63e-11!15;CL:0000055!6.34e-08!180 | ||
|ontology_enrichment_celltype_v019=CL:0000136;7.48e-14;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,7.44e-15,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!1.00e-13!216;UBERON:0000475!4.29e-11!365;UBERON:0000481!2.74e-10!347;UBERON:0005256!1.11e-09!143;UBERON:0003104!3.26e-09!238;UBERON:0009142!3.26e-09!238;UBERON:0004119!2.11e-08!169;UBERON:0000925!2.11e-08!169;UBERON:0006595!2.11e-08!169;UBERON:0000468!2.36e-08!659;UBERON:0001007!4.67e-08!155;UBERON:0001555!4.67e-08!155;UBERON:0007026!4.67e-08!155;UBERON:0004122!5.97e-08!15;UBERON:0000922!9.62e-08!612;UBERON:0000162!2.39e-07!14;UBERON:0001353!2.39e-07!14;UBERON:0000163!2.39e-07!14;UBERON:0006866!2.39e-07!14;UBERON:0000164!2.39e-07!14;UBERON:0000931!2.39e-07!14;UBERON:0000923!2.51e-07!604;UBERON:0005291!2.51e-07!604;UBERON:0006598!2.51e-07!604;UBERON:0002532!2.51e-07!604;UBERON:0000490!2.60e-07!138;UBERON:0004921!3.29e-07!129;UBERON:0004185!3.29e-07!129;UBERON:0002050!3.71e-07!605;UBERON:0005423!3.71e-07!605;UBERON:0000483!3.92e-07!309;UBERON:0000914!4.91e-07!83;UBERON:0002329!4.91e-07!83;UBERON:0003077!4.91e-07!83;UBERON:0003059!4.91e-07!83;UBERON:0007282!4.91e-07!83;UBERON:0009618!4.91e-07!83;UBERON:0007285!4.91e-07!83;UBERON:0003101!5.01e-07!22;UBERON:0000079!5.01e-07!22;UBERON:0000119!5.96e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0003101;1.31e-07;22!UBERON:0000079;1.31e-07;22!UBERON:0002367;2.21e-07;11!UBERON:0010147;2.21e-07;11!UBERON:0001013;3.62e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,8.69e-13,199;UBERON:0005256,3.00e-09,122;UBERON:0004122,6.35e-09,15;UBERON:0000162,4.24e-08,14;UBERON:0001353,4.24e-08,14;UBERON:0000163,4.24e-08,14;UBERON:0006866,4.24e-08,14;UBERON:0000164,4.24e-08,14;UBERON:0000931,4.24e-08,14;UBERON:0003104,4.99e-08,160;UBERON:0009142,4.99e-08,160;UBERON:0003101,9.49e-08,22;UBERON:0000079,9.49e-08,22;UBERON:0002367,1.01e-07,11;UBERON:0010147,1.01e-07,11;UBERON:0009846,1.01e-07,11;UBERON:0003353,1.01e-07,11;UBERON:0004902,1.01e-07,11;UBERON:0003820,1.01e-07,11;UBERON:0009847,1.01e-07,11;UBERON:0001013,4.40e-07,14;UBERON:0004119,5.13e-07,160;UBERON:0000925,5.13e-07,160;UBERON:0006595,5.13e-07,160;UBERON:0003937,8.27e-07,12;UBERON:0005399,8.27e-07,12 | |||
|phase1_expression=6.54042165374004,10.2768251467672,17.1964372997085,2.00146596706261,16.5375604938096,5.23403114460221,37.9949817252466,29.6908340510611,10.9697963843932,0.491467873003018,0.697801167972428,0,0.527533956456907,2.84662611808107,2.65117900582333,1.34465029290355,2.41077811209591,1.46062018077475,0,0.369363174230364,0.408001382488506,0.313454721478088,0,0,0,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,4.59710612239464,0.90361775633475,1.47901604066715,0,0,0,0,0,0,0.447830948479849,0.32389366601898,0.515151135268373,0.581592955118259,0,0.485168122375632,0.232429036905685,0.411167888021826,0,0.28769239232215,0.256160706529101,0.236482229888585,1.72372840368309,1.93645405075148,0,0.188242339542605,1.09162460023138,1.12361742222542,2.14258724659632,1.28371610830437,0,1.31940520074686,0,0,0,0,0.622822248995575,1.25624332628372,0,0.217188844705117,0,0,0,0,0,0,0.561643155732475,0.600707571366025,0.32145117339416,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.639312809217652,2.53007406669196,2.50668955317945,0.289693037921647,0,0.486634870302636,0.378139268656271,0,0.43917392846563,0.392937226493138,1.09288586487763,0.370784442784429,0,1.74129737299267,0.664789802594326,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0.417989933073621,0.516833518338658,0,0,0,0,0,1.10298924103761,0.81014194788176,1.3394959242612,0.22452937262617,0,0,0.949265659568129,0,0,0,1.74437620857014,0.496971951695318,3.54565432660823,0.132409180813219,3.15520282823695,1.06400514659507,1.12135520028461,0,0.49333509683432,2.8008993185979,1.75123873690594,1.9615428373615,1.36221684880438,1.15235184896,1.17160715916898,0.936480230490962,0.570471821544449,2.24173020827702,0.469737994575059,0.971237666208789,0.421352420106746,1.22492502752936,0.122834317311768,1.44656093646072,3.56400857184616,0.989067717114227,0,2.15585442544872,0.505008341862199,0.125118519871964,0.831192346452549,0.438977620880838,0.612975591598039,1.35214253015937,0.794025282120147,0,0.213557388818567,2.11931901159562,0,0.412210116953756,0,0.744467425326359,0.337552664482532,0.487185025805993,0.252433774244115,1.65689817556139,1.45481451136931,0,1.10827308050404,0.169560592310488,0.57978255948989,0.272746120590835,0,1.46368447355514,0.662648841607426,1.04574548582567,0.829288440122964,0.756962552626885,1.82488679537915,1.56449532329816,0,5.52539685409922,1.39310378409594,1.44375896333917,0.946454400318751,1.51726221070292,0.964044119533928,0.772057809126758,0.217879444092406,1.42362371466658,1.61797569792197,0.98110732562673,2.69323009862473,0,0,0.8231480226628,1.47008711385542,25.3510069643662,65.8494235174009,49.0355622545565,0,0.737930631258681,0.514703430895577,3.62175941848464,0,0.100528972411631,0.462942225792648,0.651616610620649,1.03993478527958,0,0.115930404975077,0.352226082707465,0.433099343283221,0,0.761016608938393,0,0,0.246217006087397,0.936017060556951,0.148631162288728,1.87467667973554,0,0.850650583454319,0.447792613514241,0.581267877027924,0.766765358330422,0,0,0,0,0.12624243342638,0.063497894292169,0.381988425558278,0,0,0.719792448923265,0.600686115687835,0.857479297891735,0.448524337381443,0,0.4400297149257,0.646358578788889,3.57656445851882,0.845302752556,3.72313363218819,2.08014873822732,0.771622122786426,0,0.266422179016099,2.57360388584666,1.08524321078289,0,0.977208552881205,0.355391948742546,0.791951872933429,2.1100756394171,1.74306691720059,1.09970290300263,2.43247561282381,0.502257091432126,0,1.4377491329495,0,1.42636905040718,1.44781306667579,1.02738161275192,0.895304816199478,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,1.47229790062968,2.00068208423871,1.89885516589815,0.623912584592421,1.60586089917446,0.946214490203608,0.117141414992713,2.10662269809403,11.3703752027992,2.0694614258501,0,0,3.0409265063829,0.391602314925481,0,0,0.431428401637234,0,0,0,0,3.47350930946288,0.153461973288062,1.40330047216537,4.99742682097234,2.55853624533352,1.28683136914886,0,0.771048469013278,3.19611105563629,2.62806899244189,1.03850885836724,1.51073491997947,4.3509401852984,1.80455823272956,3.95948252424354,2.29628896329214,2.91345868810747,4.58935452357984,0.451199612907412,0,0,0,0.211103257785751,0,0,0.215915916102139,0,0.270946437543853,0,0,0.831076008928724,0,0,0,1.02580050046556,0.656029291399411,0,32.1487956340893,0,0.082509499920588,0.574265537996172,2.60024098414608,4.82051789532479,2.51343867559517,1.54048617114644,2.45605879561807,0.827019434907183,3.00776685631166,1.45016693914229,1.27839941124151,0.801288320820636,6.61139661443912,1.92190067365106,0.382838137483752,1.71968227454435,1.85938219718914,3.46293581513704,0.6970372701606,0.924100740528266,1.06461206063404,0.869932992075073,1.48259375283136,0.715624433709956,0.744316738719335,1.2655176988749,2.47819252100972,1.79128453917934,2.1396949401696,0.318203247925937,1.56989728039846,2.15846949099978,1.64722217841633,1.41374882814824,1.2130948894399,1.58510321173008,1.2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|phase1_expression=6.54042165374004,10.2768251467672,17.1964372997085,2.00146596706261,16.5375604938096,5.23403114460221,37.9949817252466,29.6908340510611,10.9697963843932,0.491467873003018,0.697801167972428,0,0.527533956456907,2.84662611808107,2.65117900582333,1.34465029290355,2.41077811209591,1.46062018077475,0,0.369363174230364,0.408001382488506,0.313454721478088,0,0,0,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,4.59710612239464,0.90361775633475,1.47901604066715,0,0,0,0,0,0,0.447830948479849,0.32389366601898,0.515151135268373,0.581592955118259,0,0.485168122375632,0.232429036905685,0.411167888021826,0,0.28769239232215,0.256160706529101,0.236482229888585,1.72372840368309,1.93645405075148,0,0.188242339542605,1.09162460023138,1.12361742222542,2.14258724659632,1.28371610830437,0,1.31940520074686,0,0,0,0,0.622822248995575,1.25624332628372,0,0.217188844705117,0,0,0,0,0,0,0.561643155732475,0.600707571366025,0.32145117339416,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.639312809217652,2.53007406669196,2.50668955317945,0.289693037921647,0,0.486634870302636,0.378139268656271,0,0.43917392846563,0.392937226493138,1.09288586487763,0.370784442784429,0,1.74129737299267,0.664789802594326,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0.417989933073621,0.516833518338658,0,0,0,0,0,1.10298924103761,0.81014194788176,1.3394959242612,0.22452937262617,0,0,0.949265659568129,0,0,0,1.74437620857014,0.496971951695318,3.54565432660823,0.132409180813219,3.15520282823695,1.06400514659507,1.12135520028461,0,0.49333509683432,2.8008993185979,1.75123873690594,1.9615428373615,1.36221684880438,1.15235184896,1.17160715916898,0.936480230490962,0.570471821544449,2.24173020827702,0.469737994575059,0.971237666208789,0.421352420106746,1.22492502752936,0.122834317311768,1.44656093646072,3.56400857184616,0.989067717114227,0,2.15585442544872,0.505008341862199,0.125118519871964,0.831192346452549,0.438977620880838,0.612975591598039,1.35214253015937,0.794025282120147,0,0.213557388818567,2.11931901159562,0,0.412210116953756,0,0.744467425326359,0.337552664482532,0.487185025805993,0.252433774244115,1.65689817556139,1.45481451136931,0,1.10827308050404,0.169560592310488,0.57978255948989,0.272746120590835,0,1.46368447355514,0.662648841607426,1.04574548582567,0.829288440122964,0.756962552626885,1.82488679537915,1.56449532329816,0,5.52539685409922,1.39310378409594,1.44375896333917,0.946454400318751,1.51726221070292,0.964044119533928,0.772057809126758,0.217879444092406,1.42362371466658,1.61797569792197,0.98110732562673,2.69323009862473,0,0,0.8231480226628,1.47008711385542,25.3510069643662,65.8494235174009,49.0355622545565,0,0.737930631258681,0.514703430895577,3.62175941848464,0,0.100528972411631,0.462942225792648,0.651616610620649,1.03993478527958,0,0.115930404975077,0.352226082707465,0.433099343283221,0,0.761016608938393,0,0,0.246217006087397,0.936017060556951,0.148631162288728,1.87467667973554,0,0.850650583454319,0.447792613514241,0.581267877027924,0.766765358330422,0,0,0,0,0.12624243342638,0.063497894292169,0.381988425558278,0,0,0.719792448923265,0.600686115687835,0.857479297891735,0.448524337381443,0,0.4400297149257,0.646358578788889,3.57656445851882,0.845302752556,3.72313363218819,2.08014873822732,0.771622122786426,0,0.266422179016099,2.57360388584666,1.08524321078289,0,0.977208552881205,0.355391948742546,0.791951872933429,2.1100756394171,1.74306691720059,1.09970290300263,2.43247561282381,0.502257091432126,0,1.4377491329495,0,1.42636905040718,1.44781306667579,1.02738161275192,0.895304816199478,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,1.47229790062968,2.00068208423871,1.89885516589815,0.623912584592421,1.60586089917446,0.946214490203608,0.117141414992713,2.10662269809403,11.3703752027992,2.0694614258501,0,0,3.0409265063829,0.391602314925481,0,0,0.431428401637234,0,0,0,0,3.47350930946288,0.153461973288062,1.40330047216537,4.99742682097234,2.55853624533352,1.28683136914886,0,0.771048469013278,3.19611105563629,2.62806899244189,1.03850885836724,1.51073491997947,4.3509401852984,1.80455823272956,3.95948252424354,2.29628896329214,2.91345868810747,4.58935452357984,0.451199612907412,0,0,0,0.211103257785751,0,0,0.215915916102139,0,0.270946437543853,0,0,0.831076008928724,0,0,0,1.02580050046556,0.656029291399411,0,32.1487956340893,0,0.082509499920588,0.574265537996172,2.60024098414608,4.82051789532479,2.51343867559517,1.54048617114644,2.45605879561807,0.827019434907183,3.00776685631166,1.45016693914229,1.27839941124151,0.801288320820636,6.61139661443912,1.92190067365106,0.382838137483752,1.71968227454435,1.85938219718914,3.46293581513704,0.6970372701606,0.924100740528266,1.06461206063404,0.869932992075073,1.48259375283136,0.715624433709956,0.744316738719335,1.2655176988749,2.47819252100972,1.79128453917934,2.1396949401696,0.318203247925937,1.56989728039846,2.15846949099978,1.64722217841633,1.41374882814824,1.2130948894399,1.58510321173008,1.2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| ||
|short_description=p@chr12:16516836..16516885,+ | |short_description=p@chr12:16516836..16516885,+ | ||
}} | }} |
Latest revision as of 07:14, 24 July 2015
Short description: | p@chr12:16516836..16516885, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:16516836..16516885, + |
Coexpression cluster: | C892_mature_Adipocyte_liver_Hepatocyte_bile_lung_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 7.44e-15 | 15 |
Ontology term | p-value | n |
---|---|---|
trunk | 8.69e-13 | 199 |
trunk mesenchyme | 3.00e-09 | 122 |
genitourinary system | 6.35e-09 | 15 |
cloaca | 4.24e-08 | 14 |
anal region | 4.24e-08 | 14 |
embryonic cloaca | 4.24e-08 | 14 |
terminal part of digestive tract | 4.24e-08 | 14 |
primitive urogenital sinus | 4.24e-08 | 14 |
proctodeum | 4.24e-08 | 14 |
mesenchyme | 4.99e-08 | 160 |
entire embryonic mesenchyme | 4.99e-08 | 160 |
male organism | 9.49e-08 | 22 |
male reproductive system | 9.49e-08 | 22 |
prostate gland | 1.01e-07 | 11 |
male accessory sex gland | 1.01e-07 | 11 |
embryonic cloacal epithelium | 1.01e-07 | 11 |
epithelium of hindgut | 1.01e-07 | 11 |
urogenital sinus epithelium | 1.01e-07 | 11 |
prostate bud | 1.01e-07 | 11 |
prostate field | 1.01e-07 | 11 |
adipose tissue | 4.40e-07 | 14 |
endoderm-derived structure | 5.13e-07 | 160 |
endoderm | 5.13e-07 | 160 |
presumptive endoderm | 5.13e-07 | 160 |
sex gland | 8.27e-07 | 12 |
male reproductive gland | 8.27e-07 | 12 |