FFCP PHASE1:Mm9::chr2:151398342..151398363,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=228765 | |EntrezGene=228765 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q99JZ0 | |UniProt=Q99JZ0 | ||
|association_with_transcript=0bp_to_ENSMUST00000028950_5end | |association_with_transcript=0bp_to_ENSMUST00000028950_5end | ||
|cluster_id=chr2:151398342..151398363,+ | |||
|description=CAGE_peak_2_at_Sdcbp2_5end | |description=CAGE_peak_2_at_Sdcbp2_5end | ||
|id=chr2:151398342..151398363,+ | |id=chr2:151398342..151398363,+ | ||
|ontology_enrichment_celltype=CL:0002563!8.51e-09!9;CL:0002251!8.51e-09!9;CL:0002076!5.57e-08!15;CL:0000066!5.72e-08!25;CL:0000239!3.57e-07!6;CL:0000677!3.57e-07!6;CL:0000212!3.57e-07!6;CL:0000584!3.57e-07!6;CL:0000223!8.98e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.40e-12,15;CL:0002563,3.24e-12,9;CL:0002251,3.24e-12,9;CL:0000239,6.61e-12,6;CL:0000677,6.61e-12,6;CL:0000584,6.61e-12,6;CL:0000066,1.51e-11,25;CL:0000075,4.67e-10,7;CL:0000223,8.81e-09,20;CL:0000682,5.68e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.18e-16!59;UBERON:0000160!1.80e-15!43;UBERON:0000344!1.96e-14!15;UBERON:0001242!1.23e-12!13;UBERON:0000060!1.23e-12!13;UBERON:0001262!1.23e-12!13;UBERON:0004786!1.23e-12!13;UBERON:0004119!4.10e-11!130;UBERON:0000925!4.10e-11!130;UBERON:0006595!4.10e-11!130;UBERON:0001007!4.56e-11!128;UBERON:0001555!4.56e-11!128;UBERON:0007026!4.56e-11!128;UBERON:0004921!5.80e-10!126;UBERON:0004185!5.80e-10!126;UBERON:0004923!7.72e-09!24;UBERON:0003350!8.51e-09!9;UBERON:0004808!8.51e-09!9;UBERON:0001277!8.51e-09!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.43e-37,31;UBERON:0005409,2.81e-36,47;UBERON:0000344,1.91e-22,15;UBERON:0001007,1.73e-19,116;UBERON:0001555,1.73e-19,116;UBERON:0007026,1.73e-19,116;UBERON:0001242,3.74e-19,13;UBERON:0001262,3.74e-19,13;UBERON:0004786,3.74e-19,13;UBERON:0004119,5.67e-19,118;UBERON:0000925,5.67e-19,118;UBERON:0006595,5.67e-19,118;UBERON:0004921,2.11e-17,114;UBERON:0004923,2.18e-14,24;UBERON:0003350,3.24e-12,9;UBERON:0004808,3.24e-12,9;UBERON:0001277,3.24e-12,9;UBERON:0000485,1.08e-09,11;UBERON:0002108,3.43e-08,4;UBERON:0000331,7.05e-07,3;UBERON:0002116,7.05e-07,3;UBERON:0001204,7.05e-07,3;UBERON:0001168,7.05e-07,3 | |||
|phase1_expression=0,12.563114675017,16.3799726180233,9.0739263392049,10.5188103288733,9.56911849897772,7.47560449905682,3.48632973292256,1.54867594366833,1.63845168425395,0.856089841127525,0.239316476986009,0.342401459862411,0.262261207256992,0,0,0,0,0.274228867211478,0.42438965179803,0.0850432901510698,0,0,7.51964387129011,7.57050627521661,14.3557991028755,10.7690499039769,12.0663890304098,12.3515222646643,12.3494763582366,9.09095093686749,0,0,0,0.866554859253824,1.49611180822643,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45072428402269,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0.289864488701678,0,0.679971333707751,0,0,0,0.280888840263504,0,0,0,0,0,0,0,3.030874574157,5.57391704045217,3.0331466700887,0.79928715803342,0,0,0,0,0,0,0,0,1.97755974187499,0,0,0.323533699894818,0,0,11.1835056730873,0,0,6.13096932500619,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,5.55990068554084,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0.411564272815887,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.210289948564127,0,10.5734010554815,3.96675849995316,0,0,0.77320476793256,1.21010114774006,2.2237804384487,3.61428689613862,4.74529061544512,4.6115707322723,5.52937459360593,3.78017296878187,4.28920991662064,3.59527763461689,6.48414149624083,4.97853183135918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0.144649058581512,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0.329940245945071,0,0,0,0,0,0,0.516856586336442,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,1.6488625294148,1.61464426695906,0.301564624640779,0.477489376012546,0.328281799490123,3.20628920292836,0,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,1.72808545314882,1.67270636811575,2.40198820120795,1.75323650300267,2.0663363931334,2.6175594198403,11.0172727298024,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0,0,0,0,2.0405734525369,0,0,0,1.54551675225752,0,0.915758121336325,2.78678892802786,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0.222246727801615,0,0.320919209591815,0.252697211763798,0,0,0.37456602987953,0.256100609619477,0.17230640686684,0,0.231768651889711,0,0.412085900803307,0.441596760403192,0,0,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,0,0.263069711437843,0,0.561142271657738,0,0.0985044823755635,0,0.309873682371932,0.578719832943424,0.249810577937946,0.467863216890817,0.644613162144895,0.382576664137687,0,0 | |phase1_expression=0,12.563114675017,16.3799726180233,9.0739263392049,10.5188103288733,9.56911849897772,7.47560449905682,3.48632973292256,1.54867594366833,1.63845168425395,0.856089841127525,0.239316476986009,0.342401459862411,0.262261207256992,0,0,0,0,0.274228867211478,0.42438965179803,0.0850432901510698,0,0,7.51964387129011,7.57050627521661,14.3557991028755,10.7690499039769,12.0663890304098,12.3515222646643,12.3494763582366,9.09095093686749,0,0,0,0.866554859253824,1.49611180822643,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45072428402269,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0.289864488701678,0,0.679971333707751,0,0,0,0.280888840263504,0,0,0,0,0,0,0,3.030874574157,5.57391704045217,3.0331466700887,0.79928715803342,0,0,0,0,0,0,0,0,1.97755974187499,0,0,0.323533699894818,0,0,11.1835056730873,0,0,6.13096932500619,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,5.55990068554084,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0.411564272815887,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.210289948564127,0,10.5734010554815,3.96675849995316,0,0,0.77320476793256,1.21010114774006,2.2237804384487,3.61428689613862,4.74529061544512,4.6115707322723,5.52937459360593,3.78017296878187,4.28920991662064,3.59527763461689,6.48414149624083,4.97853183135918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0.144649058581512,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0.329940245945071,0,0,0,0,0,0,0.516856586336442,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,1.6488625294148,1.61464426695906,0.301564624640779,0.477489376012546,0.328281799490123,3.20628920292836,0,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,1.72808545314882,1.67270636811575,2.40198820120795,1.75323650300267,2.0663363931334,2.6175594198403,11.0172727298024,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0,0,0,0,2.0405734525369,0,0,0,1.54551675225752,0,0.915758121336325,2.78678892802786,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0.222246727801615,0,0.320919209591815,0.252697211763798,0,0,0.37456602987953,0.256100609619477,0.17230640686684,0,0.231768651889711,0,0.412085900803307,0.441596760403192,0,0,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,0,0.263069711437843,0,0.561142271657738,0,0.0985044823755635,0,0.309873682371932,0.578719832943424,0.249810577937946,0.467863216890817,0.644613162144895,0.382576664137687,0,0 | ||
|short_description=p2@Sdcbp2 | |short_description=p2@Sdcbp2 | ||
}} | }} |
Latest revision as of 21:39, 25 September 2015
Short description: | p2@Sdcbp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sdcbp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000028950_5end |
EntrezGene: | Sdcbp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.40e-12 | 15 |
intestinal epithelial cell | 3.24e-12 | 9 |
epithelial cell of alimentary canal | 3.24e-12 | 9 |
brush border epithelial cell | 6.61e-12 | 6 |
gut absorptive cell | 6.61e-12 | 6 |
enterocyte | 6.61e-12 | 6 |
epithelial cell | 1.51e-11 | 25 |
columnar/cuboidal epithelial cell | 4.67e-10 | 7 |
endodermal cell | 8.81e-09 | 20 |
M cell of gut | 5.68e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.43e-37 | 31 |
gastrointestinal system | 2.81e-36 | 47 |
mucosa | 1.91e-22 | 15 |
digestive system | 1.73e-19 | 116 |
digestive tract | 1.73e-19 | 116 |
primitive gut | 1.73e-19 | 116 |
intestinal mucosa | 3.74e-19 | 13 |
wall of intestine | 3.74e-19 | 13 |
gastrointestinal system mucosa | 3.74e-19 | 13 |
endoderm-derived structure | 5.67e-19 | 118 |
endoderm | 5.67e-19 | 118 |
presumptive endoderm | 5.67e-19 | 118 |
subdivision of digestive tract | 2.11e-17 | 114 |
organ component layer | 2.18e-14 | 24 |
epithelium of mucosa | 3.24e-12 | 9 |
gastrointestinal system epithelium | 3.24e-12 | 9 |
intestinal epithelium | 3.24e-12 | 9 |
simple columnar epithelium | 1.08e-09 | 11 |
small intestine | 3.43e-08 | 4 |
ileal mucosa | 7.05e-07 | 3 |
ileum | 7.05e-07 | 3 |
mucosa of small intestine | 7.05e-07 | 3 |
wall of small intestine | 7.05e-07 | 3 |