FFCP PHASE1:Hg19::chr12:3394446..3394452,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10867 | |EntrezGene=10867 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=21640 | |HGNC=21640 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=439bp_to_BC034280_5end | |association_with_transcript=439bp_to_BC034280_5end | ||
|cluster_id=chr12:3394446..3394452,+ | |||
|description=CAGE_peak_3_at_TSPAN9_5end | |description=CAGE_peak_3_at_TSPAN9_5end | ||
|id=chr12:3394446..3394452,+ | |id=chr12:3394446..3394452,+ | ||
|ontology_enrichment_celltype=CL:0000220!8.17e-10!246;CL:0002321!1.30e-09!248;CL:0000222!4.46e-09!119 | |ontology_enrichment_celltype=CL:0000220!8.17e-10!246;CL:0002321!1.30e-09!248;CL:0000222!4.46e-09!119 | ||
|ontology_enrichment_celltype_v019=CL:0002603;7.40e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002603,4.84e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!4.70e-11!659;UBERON:0000483!1.64e-10!309;UBERON:0000477!2.90e-10!286;UBERON:0000481!3.08e-10!347;UBERON:0000475!3.61e-10!365;UBERON:0004111!4.41e-10!241;UBERON:0000119!6.21e-10!312;UBERON:0000467!1.01e-09!625;UBERON:0000480!1.48e-09!626;UBERON:0000922!1.10e-08!612;UBERON:0002050!5.52e-08!605;UBERON:0005423!5.52e-08!605;UBERON:0000923!8.06e-08!604;UBERON:0005291!8.06e-08!604;UBERON:0006598!8.06e-08!604;UBERON:0002532!8.06e-08!604;UBERON:0002417!1.12e-07!61;UBERON:0000916!1.12e-07!61;UBERON:0002049!1.47e-07!79;UBERON:0007798!1.47e-07!79;UBERON:0003103!4.01e-07!69;UBERON:0004121!4.38e-07!169;UBERON:0000924!6.49e-07!173;UBERON:0006601!6.49e-07!173;UBERON:0001009!8.18e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.36e-10;6!UBERON:0004733;6.79e-07;12!UBERON:0002028;6.79e-07;12!UBERON:0002680;9.22e-07;9!UBERON:0001895;9.22e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,9.23e-11,6;UBERON:0006215,9.23e-11,6;UBERON:0004733,5.03e-07,12;UBERON:0002028,5.03e-07,12;UBERON:0007277,5.03e-07,12;UBERON:0002680,5.07e-07,9;UBERON:0001895,5.07e-07,9;UBERON:0010092,5.07e-07,9 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.704772020479856,1.0007329835313,1.34088328328186,2.61701557230111,0,1.26343974685366,0.522371256399677,0,0.697801167972428,0.436882744260345,0.263766978228454,0.123766352960047,0,1.34465029290355,0,0.730310090387373,1.46379839637152,1.60057375499824,1.02000345622126,1.88072832886853,1.14494394852423,0.958120975510189,0.376627918784408,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.767175371061182,0.361439152384566,0.50133791063589,0.724232594804119,0,0,0.472674085820339,1.77383517970051,0.175669571386252,0.196468613246569,0.728590576585084,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.838998872419812,0.550236083880135,0,0.775250277507987,1.42306505074684,0.33472061276467,3.22263453687318,0.760272105718513,2.4406205754817,1.47065232138347,0.81014194788176,0.446498641420399,0.22452937262617,0.225222960966644,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0.264818361626438,1.14734648299525,0.354668382198357,0,1.06748995729705,1.72667283892012,0,0.404132016209064,0.163461903113459,1.36221684880438,0.576175924479999,0.234321431833797,0.312160076830321,0,0.298897361103602,0.117434498643765,0,0.140450806702248,0.61246251376468,0.982674538494144,0.309977343527296,1.18800285728205,0.494533858557114,0,1.43723628363248,0.168336113954066,0.125118519871964,0,0.877955241761676,0.30648779579902,0,0.567160915800105,0.717558542755448,0.640672166455702,0.211931901159562,0.300091096084402,0.206105058476878,0,0,0.168776332241266,0.194874010322397,0,0.184099797284599,0,0,0,0.169560592310488,0,0.545492241181669,0,0.121973706129595,0,0.232387885739037,0.518305275076852,0.252320850875628,0.36497735907583,0,0.643240938192885,0,1.39310378409594,0.721879481669586,0.118306800039844,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,0.4115740113314,0,1.26755034821831,1.96565443335525,1.18157981336281,0,0.245976877086227,0.343135620597051,0.329250856225877,0,0.301586917234893,0.0925884451585296,0,2.07986957055916,0,0.34779121492523,0.234817388471643,1.58803092537181,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0,0,0.288239906833923,0.25248486685276,0.190493682876507,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0,0.258543431515556,0,0,1.06375246633948,1.04007436911366,0,0,0,0.285955987316295,0.542621605391443,1.64648067356154,0,0.710783897485092,1.58390374586686,0.904318131178758,0.871533458600294,0.799783929456456,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0.76228387266739,1.30139853857622,1.54657762555539,0.335032530668698,0,0,0,0,0.36807447515742,0,0.271265023699736,0.207970861530807,0.535286966391485,0.157702415033935,0.468565659970853,0,0,0,0,0,0.0868836144680828,1.17480694477644,3.43143423810856,0,0,0.106727557803444,0.303127571446259,0,0.30239029332968,0,0,0.280660094433074,0,0.511707249066704,0.965123526861645,0,0,0.177561725313127,0.164254312027618,1.55776328755086,0,0.241718899183244,0.200506470303285,0.0920809889358963,0.114814448164607,0.182091168006717,0.786746489756545,0,0.539107359730903,0.784349769176855,1.46139224653261,0.844413031143006,2.27466768141793,0.510281115829547,0.431831832204279,1.54227252690289,0.541892875087706,0.501689773854853,0.509752546090077,0,0,0,0,0.256450125116389,0,0.650756789328606,0.515205058238611,0.366277859273374,0.247528499761764,0.574265537996172,1.95018073810956,1.6068392984416,0.580024309752732,0.308097234229289,0.15350367472613,0.413509717453592,0.214840489736547,0.145016693914229,0.255679882248303,0.534192213880424,0.165284915360978,0.576570202095319,0,0,0.929691098594572,0,0,1.23213432070436,0,0.869932992075073,0,0.286249773483982,0.372158369359667,0.949138274156178,0.190630193923825,0.767693373934002,1.28381696410176,0,0.78494864019923,0.179872457583315,0.274537029736055,0.353437207037059,0.202182481573316,0,0,0,0.974853958525138,0,0.545999645631943,0.282810863907425,0,0,0.66343897524122,0.438450885253763,1.73632660280006,0.655894752046633,0.202910376962704,0,0.281695602532241,0.286822704408103,0.589494246078727,0,1.06428319221179,0,0.658589785919804,0.75894634753143,1.04980416073495,0,0,0,0.847294206991012,0.86101074534246,0,0.443430153536676,0,0,0,0.569647187174163,0.238231775457789,0,0.648473311192717,0,0,0,0.962479855263359,0.245040215981032,0,0.28853842595289,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0.278406173895242,0,0.270455678475983,0,0,0,0.146508179271894,0.36408156524854,0.111443384277478,0,0.23874448473769,0.593929361665277,0,0,0,0.111308705022906,0.16480387422676,0.211125408127993,0.796991953004279,0,0.755798243562828,0.306806047506464,0,0,0.0898683511473268,0,0,0.295930216910801,0,1.11136990144637,0,0.0927680981618513,0,0,0.174919999992391,0.724999575434793,0.1137934482855,0,0,0.344743373241465,0,0.173624994933292,0,0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| ||
|short_description=p3@TSPAN9 | |short_description=p3@TSPAN9 | ||
}} | }} |
Latest revision as of 05:30, 18 September 2015
Short description: | p3@TSPAN9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TSPAN9_5end |
Coexpression cluster: | NA |
Association with transcript: | 439bp_to_BC034280_5end |
EntrezGene: | TSPAN9 |
HGNC: | 21640 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 4.84e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 9.23e-11 | 6 |
rhombic lip | 9.23e-11 | 6 |
segmental subdivision of hindbrain | 5.03e-07 | 12 |
hindbrain | 5.03e-07 | 12 |
presumptive hindbrain | 5.03e-07 | 12 |
regional part of metencephalon | 5.07e-07 | 9 |
metencephalon | 5.07e-07 | 9 |
future metencephalon | 5.07e-07 | 9 |