FFCP PHASE1:Hg19::chr12:53200913..53200924,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:53200913..53200924,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_at_chr12:53200913..53200924,- | |description=CAGE_peak_at_chr12:53200913..53200924,- | ||
|id=chr12:53200913..53200924,- | |id=chr12:53200913..53200924,- | ||
|ontology_enrichment_celltype=CL:0002623!8.15e-07!3 | |ontology_enrichment_celltype=CL:0002623!8.15e-07!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;6.62e-41;1!UBERON:0008814;5.70e-21;2!UBERON:0010056;5.70e-21;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001723!3.29e-23!3;UBERON:0001033!3.29e-23!3;UBERON:0010056!3.29e-23!3;UBERON:0002372!3.16e-18!1;UBERON:0001961!3.16e-18!1;UBERON:0001744!3.16e-18!1;UBERON:0001735!3.16e-18!1;UBERON:0000989!1.03e-17!1;UBERON:0008811!1.03e-17!1;UBERON:0006258!1.03e-17!1;UBERON:0005876!1.03e-17!1;UBERON:0004874!1.03e-17!1;UBERON:0002171!1.22e-17!1;UBERON:0006518!1.22e-17!1;UBERON:0008949!1.22e-17!1;UBERON:0000101!1.22e-17!1;UBERON:0002167!1.22e-17!1;UBERON:0001042!1.01e-15!10;UBERON:0009145!1.01e-15!10;UBERON:0000078!3.54e-15!18;UBERON:0006562!2.35e-14!11;UBERON:0000166!4.64e-13!21;UBERON:0000002!5.37e-12!6;UBERON:0001560!5.37e-12!6;UBERON:0000165!7.15e-10!28;UBERON:0000930!7.15e-10!28;UBERON:0000341!9.46e-10!2;UBERON:0003127!2.02e-09!2;UBERON:0007023!1.16e-08!115;UBERON:0001557!1.46e-08!19;UBERON:0001004!4.40e-08!72;UBERON:0000161!5.98e-08!35;UBERON:0001041!6.68e-08!98;UBERON:0000065!7.46e-08!53;UBERON:0000995!1.17e-07!21;UBERON:0005795!2.47e-07!22;UBERON:0003975!2.47e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;6.39e-53;3!UBERON:0001033;6.39e-53;3!UBERON:0002372;1.21e-40;1!UBERON:0001961;1.21e-40;1!UBERON:0001744;1.21e-40;1!UBERON:0001042;1.21e-40;1!UBERON:0001735;1.21e-40;1!UBERON:0000341;4.21e-21;2!UBERON:0006562;4.21e-21;2!UBERON:0001043;1.22e-14;3!UBERON:0000165;1.70e-13;28!UBERON:0000974;6.13e-08;6!UBERON:0000020;7.23e-08;23!UBERON:0001032;1.40e-07;24!UBERON:0004456;1.40e-07;24!UBERON:0000153;2.00e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,6.39e-53,3;UBERON:0001033,6.39e-53,3;UBERON:0010056,6.39e-53,3;UBERON:0002372,9.91e-41,1;UBERON:0001961,9.91e-41,1;UBERON:0001744,9.91e-41,1;UBERON:0001735,9.91e-41,1;UBERON:0001042,4.37e-36,10;UBERON:0009145,4.37e-36,10;UBERON:0006562,6.65e-33,11;UBERON:0000341,4.66e-21,2;UBERON:0001557,1.79e-19,19;UBERON:0000166,6.04e-17,22;UBERON:0001043,1.22e-14,3;UBERON:0009143,1.22e-14,3;UBERON:0000165,4.54e-13,29;UBERON:0000930,4.54e-13,29;UBERON:0000153,7.02e-11,62;UBERON:0007811,7.02e-11,62;UBERON:0000161,1.09e-10,36;UBERON:0008814,8.86e-10,18;UBERON:0000072,2.27e-08,47;UBERON:0001444,4.65e-08,49;UBERON:0001041,5.98e-08,87;UBERON:0000020,1.40e-07,24;UBERON:0001032,1.40e-07,24;UBERON:0004456,1.40e-07,24;UBERON:0000065,2.22e-07,54;UBERON:0000033,3.84e-07,56 | |||
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|short_description=p@chr12:53200913..53200924,- | |short_description=p@chr12:53200913..53200924,- | ||
}} | }} |
Latest revision as of 09:40, 24 July 2015
Short description: | p@chr12:53200913..53200924, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:53200913..53200924, - |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 6.39e-53 | 3 |
gustatory system | 6.39e-53 | 3 |
future tongue | 6.39e-53 | 3 |
tonsil | 9.91e-41 | 1 |
mucosa-associated lymphoid tissue | 9.91e-41 | 1 |
lymphoid tissue | 9.91e-41 | 1 |
tonsillar ring | 9.91e-41 | 1 |
chordate pharynx | 4.37e-36 | 10 |
pharyngeal region of foregut | 4.37e-36 | 10 |
pharynx | 6.65e-33 | 11 |
throat | 4.66e-21 | 2 |
upper respiratory tract | 1.79e-19 | 19 |
oral opening | 6.04e-17 | 22 |
esophagus | 1.22e-14 | 3 |
esophageal region | 1.22e-14 | 3 |
mouth | 4.54e-13 | 29 |
stomodeum | 4.54e-13 | 29 |
anterior region of body | 7.02e-11 | 62 |
craniocervical region | 7.02e-11 | 62 |
orifice | 1.09e-10 | 36 |
pharyngeal arch system | 8.86e-10 | 18 |
segment of respiratory tract | 2.27e-08 | 47 |
subdivision of head | 4.65e-08 | 49 |
foregut | 5.98e-08 | 87 |
sense organ | 1.40e-07 | 24 |
sensory system | 1.40e-07 | 24 |
entire sense organ system | 1.40e-07 | 24 |
respiratory tract | 2.22e-07 | 54 |
head | 3.84e-07 | 56 |