FFCP PHASE1:Hg19::chr12:54367122..54367144,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3227 | |EntrezGene=3227 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5123 | |HGNC=5123 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=96bp_to_CU674756,HQ447392_5end | |association_with_transcript=96bp_to_CU674756,HQ447392_5end | ||
|cluster_id=chr12:54367122..54367144,+ | |||
|coexpression_cluster_id=C1676 | |||
|description=CAGE_peak_4_at_HOXC11_5end | |description=CAGE_peak_4_at_HOXC11_5end | ||
|id=chr12:54367122..54367144,+ | |id=chr12:54367122..54367144,+ | ||
|ontology_enrichment_celltype=CL:0002594!2.00e-07!4 | |ontology_enrichment_celltype=CL:0002594!2.00e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002178;6.17e-09;3!CL:0000167;8.72e-07;1!CL:0000164;8.72e-07;1!CL:0000502;8.72e-07;1!CL:0000172;8.72e-07;1!CL:0000228;8.72e-07;1!CL:0002372;8.72e-07;1!CL:0000173;8.72e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,6.18e-09,3;CL:0000228,6.76e-07,1;CL:0002372,6.76e-07,1;CL:0000167,8.02e-07,1;CL:0000164,8.02e-07,1;CL:0000502,8.02e-07,1;CL:0000172,8.02e-07,1;CL:0000173,8.02e-07,1;CL:0002351,8.02e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.09e-07;1!UBERON:0000358;3.78e-07;1!CL:0002351;8.72e-07;1 | |||
|ontology_enrichment_disease=DOID:0050687!2.93e-17!143;DOID:305!4.19e-09!106;DOID:162!6.02e-09!235;DOID:14566!6.48e-09!239;DOID:171!9.69e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.71e-12;2!DOID:171;2.43e-09;10!DOID:299;1.21e-07;25!DOID:3119;8.23e-07;14!DOID:3111;8.72e-07;1!DOID:3603;8.72e-07;1!DOID:4430;8.72e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,4.48e-21,143;DOID:305,3.49e-13,106;DOID:3493,1.98e-12,2;DOID:162,8.94e-12,235;DOID:14566,2.05e-11,239;DOID:171,2.44e-09,10;DOID:299,1.58e-07,25;DOID:4430,8.02e-07,1;DOID:3119,9.53e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.21e-15!9;UBERON:0001557!1.68e-07!19;UBERON:0001310!2.00e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.65e-10;9!UBERON:0001557;4.65e-10;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.50e-10,9 | |||
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| ||
|short_description=p4@HOXC11 | |short_description=p4@HOXC11 | ||
}} | }} |
Latest revision as of 04:19, 19 September 2015
Short description: | p4@HOXC11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HOXC11_5end |
Coexpression cluster: | C1676_neuroectodermal_synovial_breast_anaplastic_epitheloid_rhabdomyosarcoma_neuroepithelioma |
Association with transcript: | 96bp_to_CU674756, HQ447392_5end |
EntrezGene: | HOXC11 |
HGNC: | 5123 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 6.18e-09 | 3 |
multinucleate cell | 6.76e-07 | 1 |
myotube | 6.76e-07 | 1 |
peptide hormone secreting cell | 8.02e-07 | 1 |
enteroendocrine cell | 8.02e-07 | 1 |
type D enteroendocrine cell | 8.02e-07 | 1 |
somatostatin secreting cell | 8.02e-07 | 1 |
pancreatic D cell | 8.02e-07 | 1 |
progenitor cell of endocrine pancreas | 8.02e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.50e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 4.48e-21 | 143 |
carcinoma | 3.49e-13 | 106 |
signet ring cell adenocarcinoma | 1.98e-12 | 2 |
cancer | 8.94e-12 | 235 |
disease of cellular proliferation | 2.05e-11 | 239 |
neuroectodermal tumor | 2.44e-09 | 10 |
adenocarcinoma | 1.58e-07 | 25 |
somatostatinoma | 8.02e-07 | 1 |
gastrointestinal system cancer | 9.53e-07 | 14 |