FFCP PHASE1:Mm9::chr3:14863921..14863937,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:14863921..14863937,- | |||
|description=CAGE_peak_at_chr3:14863921..14863937,- | |description=CAGE_peak_at_chr3:14863921..14863937,- | ||
|id=chr3:14863921..14863937,- | |id=chr3:14863921..14863937,- | ||
|ontology_enrichment_celltype=CL:0000181!3.01e-24!5;CL:0000417!3.01e-24!5;CL:0000668!3.01e-24!5;CL:0000412!3.01e-24!5;CL:0000182!3.01e-24!5;CL:0000414!5.88e-11!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.40e-22,5;CL:0000057,1.84e-08,1;CL:0000632,1.84e-08,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!9.74e-53!22;UBERON:0007499!9.74e-53!22;UBERON:0006925!9.74e-53!22;UBERON:0009497!9.74e-53!22;UBERON:0000015!9.74e-53!22;UBERON:0002423!9.74e-53!22;UBERON:0006235!9.74e-53!22;UBERON:0008835!9.74e-53!22;UBERON:0003894!9.74e-53!22;UBERON:0004161!9.74e-53!22;UBERON:0008836!9.74e-53!22;UBERON:0009854!2.37e-50!23;UBERON:0009856!2.37e-50!23;UBERON:0002365!3.76e-46!25;UBERON:0002330!3.76e-46!25;UBERON:0003914!1.69e-23!47;UBERON:0005256!1.69e-23!47;UBERON:0005172!1.92e-22!49;UBERON:0005173!1.92e-22!49;UBERON:0002417!1.92e-22!49;UBERON:0000916!1.92e-22!49;UBERON:0005057!1.80e-21!51;UBERON:0003929!9.71e-20!55;UBERON:0002368!6.75e-18!60;UBERON:0002530!2.46e-16!65;UBERON:0000490!4.73e-16!66;UBERON:0009569!4.73e-16!66;UBERON:0005911!3.00e-15!69;UBERON:0002405!5.37e-15!70;UBERON:0000949!1.64e-14!72;UBERON:0000466!5.21e-13!79;UBERON:0005177!6.45e-12!85;UBERON:0001041!8.06e-11!92;UBERON:0000077!3.93e-10!97;UBERON:0002100!5.29e-10!98;UBERON:0000025!3.06e-08!114;UBERON:0004111!1.57e-07!122;UBERON:0004921!3.30e-07!126;UBERON:0004185!3.30e-07!126;UBERON:0001007!4.69e-07!128;UBERON:0001555!4.69e-07!128;UBERON:0007026!4.69e-07!128;UBERON:0004119!6.61e-07!130;UBERON:0000925!6.61e-07!130;UBERON:0006595!6.61e-07!130;UBERON:0003104!7.82e-07!131;UBERON:0009142!7.82e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.41e-36,22;UBERON:0007499,1.41e-36,22;UBERON:0006925,1.41e-36,22;UBERON:0009497,1.41e-36,22;UBERON:0000015,1.41e-36,22;UBERON:0002423,1.41e-36,22;UBERON:0006235,1.41e-36,22;UBERON:0008835,1.41e-36,22;UBERON:0003894,1.41e-36,22;UBERON:0004161,1.41e-36,22;UBERON:0008836,1.41e-36,22;UBERON:0009854,5.97e-35,23;UBERON:0009856,5.97e-35,23;UBERON:0002365,4.38e-32,25;UBERON:0002330,4.38e-32,25;UBERON:0005256,2.12e-17,45;UBERON:0003914,1.29e-16,47;UBERON:0005172,6.76e-16,49;UBERON:0005173,6.76e-16,49;UBERON:0002417,6.76e-16,49;UBERON:0000916,6.76e-16,49;UBERON:0003929,4.79e-14,55;UBERON:0002368,8.74e-13,60;UBERON:0003104,1.48e-12,61;UBERON:0009142,1.48e-12,61;UBERON:0002530,1.02e-11,65;UBERON:0000490,1.60e-11,66;UBERON:0009569,1.60e-11,66;UBERON:0005911,5.70e-11,69;UBERON:0000949,1.82e-10,72;UBERON:0005177,1.96e-09,79;UBERON:0001041,2.66e-09,80;UBERON:0002100,3.91e-08,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,8.60423876981386,6.11974200336975,8.63525106620507,4.54843492213368,5.37632264516803,1.54488862144927,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.22550516883013,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0.274561413188081,2.87536413054709,0.744281895337007,1.5601883655728,1.51547326768267,6.09951205974501,3.37710464954357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,8.60423876981386,6.11974200336975,8.63525106620507,4.54843492213368,5.37632264516803,1.54488862144927,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.22550516883013,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0.274561413188081,2.87536413054709,0.744281895337007,1.5601883655728,1.51547326768267,6.09951205974501,3.37710464954357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:14863921..14863937,- | |short_description=p@chr3:14863921..14863937,- | ||
}} | }} |
Latest revision as of 05:20, 6 August 2015
Short description: | p@chr3:14863921..14863937, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:14863921..14863937, - |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.40e-22 | 5 |
fibroblast | 1.84e-08 | 1 |
hepatic stellate cell | 1.84e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
liver | 1.41e-36 | 22 |
epithelial sac | 1.41e-36 | 22 |
digestive gland | 1.41e-36 | 22 |
epithelium of foregut-midgut junction | 1.41e-36 | 22 |
anatomical boundary | 1.41e-36 | 22 |
hepatobiliary system | 1.41e-36 | 22 |
foregut-midgut junction | 1.41e-36 | 22 |
hepatic diverticulum | 1.41e-36 | 22 |
liver primordium | 1.41e-36 | 22 |
septum transversum | 1.41e-36 | 22 |
liver bud | 1.41e-36 | 22 |
digestive tract diverticulum | 5.97e-35 | 23 |
sac | 5.97e-35 | 23 |
exocrine gland | 4.38e-32 | 25 |
exocrine system | 4.38e-32 | 25 |
trunk mesenchyme | 2.12e-17 | 45 |
epithelial tube | 1.29e-16 | 47 |
abdomen element | 6.76e-16 | 49 |
abdominal segment element | 6.76e-16 | 49 |
abdominal segment of trunk | 6.76e-16 | 49 |
abdomen | 6.76e-16 | 49 |
gut epithelium | 4.79e-14 | 55 |
endocrine gland | 8.74e-13 | 60 |
mesenchyme | 1.48e-12 | 61 |
entire embryonic mesenchyme | 1.48e-12 | 61 |
gland | 1.02e-11 | 65 |
unilaminar epithelium | 1.60e-11 | 66 |
subdivision of trunk | 1.60e-11 | 66 |
endo-epithelium | 5.70e-11 | 69 |
endocrine system | 1.82e-10 | 72 |
trunk region element | 1.96e-09 | 79 |
foregut | 2.66e-09 | 80 |
trunk | 3.91e-08 | 90 |