FFCP PHASE1:Mm9::chr11:117066159..117066175,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:117066159..117066175,+ | |||
|description=CAGE_peak_at_chr11:117066159..117066175,+ | |description=CAGE_peak_at_chr11:117066159..117066175,+ | ||
|id=chr11:117066159..117066175,+ | |id=chr11:117066159..117066175,+ | ||
|ontology_enrichment_celltype=CL:0000239!1.57e-09!6;CL:0000677!1.57e-09!6;CL:0000212!1.57e-09!6;CL:0000584!1.57e-09!6;CL:0000075!5.63e-08!7;CL:0002563!1.21e-07!9;CL:0002251!1.21e-07!9 | |ontology_enrichment_celltype=CL:0000239!1.57e-09!6;CL:0000677!1.57e-09!6;CL:0000212!1.57e-09!6;CL:0000584!1.57e-09!6;CL:0000075!5.63e-08!7;CL:0002563!1.21e-07!9;CL:0002251!1.21e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.82e-18,6;CL:0000677,3.82e-18,6;CL:0000584,3.82e-18,6;CL:0000075,1.87e-15,7;CL:0002563,7.33e-12,9;CL:0002251,7.33e-12,9;CL:0000682,9.31e-10,3;CL:0000066,2.10e-08,25;CL:0002076,7.95e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!8.44e-18!43;UBERON:0005409!1.64e-15!59;UBERON:0000344!9.39e-15!15;UBERON:0001242!1.91e-12!13;UBERON:0000060!1.91e-12!13;UBERON:0001262!1.91e-12!13;UBERON:0004786!1.91e-12!13;UBERON:0004119!4.44e-12!130;UBERON:0000925!4.44e-12!130;UBERON:0006595!4.44e-12!130;UBERON:0001007!9.35e-12!128;UBERON:0001555!9.35e-12!128;UBERON:0007026!9.35e-12!128;UBERON:0004921!1.94e-10!126;UBERON:0004185!1.94e-10!126;UBERON:0004923!2.93e-10!24;UBERON:0002107!7.03e-08!22;UBERON:0007499!7.03e-08!22;UBERON:0006925!7.03e-08!22;UBERON:0009497!7.03e-08!22;UBERON:0000015!7.03e-08!22;UBERON:0002423!7.03e-08!22;UBERON:0006235!7.03e-08!22;UBERON:0008835!7.03e-08!22;UBERON:0003894!7.03e-08!22;UBERON:0004161!7.03e-08!22;UBERON:0008836!7.03e-08!22;UBERON:0003350!1.21e-07!9;UBERON:0004808!1.21e-07!9;UBERON:0001277!1.21e-07!9;UBERON:0009854!2.20e-07!23;UBERON:0009856!2.20e-07!23 | |ontology_enrichment_uberon=UBERON:0000160!8.44e-18!43;UBERON:0005409!1.64e-15!59;UBERON:0000344!9.39e-15!15;UBERON:0001242!1.91e-12!13;UBERON:0000060!1.91e-12!13;UBERON:0001262!1.91e-12!13;UBERON:0004786!1.91e-12!13;UBERON:0004119!4.44e-12!130;UBERON:0000925!4.44e-12!130;UBERON:0006595!4.44e-12!130;UBERON:0001007!9.35e-12!128;UBERON:0001555!9.35e-12!128;UBERON:0007026!9.35e-12!128;UBERON:0004921!1.94e-10!126;UBERON:0004185!1.94e-10!126;UBERON:0004923!2.93e-10!24;UBERON:0002107!7.03e-08!22;UBERON:0007499!7.03e-08!22;UBERON:0006925!7.03e-08!22;UBERON:0009497!7.03e-08!22;UBERON:0000015!7.03e-08!22;UBERON:0002423!7.03e-08!22;UBERON:0006235!7.03e-08!22;UBERON:0008835!7.03e-08!22;UBERON:0003894!7.03e-08!22;UBERON:0004161!7.03e-08!22;UBERON:0008836!7.03e-08!22;UBERON:0003350!1.21e-07!9;UBERON:0004808!1.21e-07!9;UBERON:0001277!1.21e-07!9;UBERON:0009854!2.20e-07!23;UBERON:0009856!2.20e-07!23 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.67e-45,31;UBERON:0005409,5.84e-28,47;UBERON:0000344,2.82e-26,15;UBERON:0001242,1.55e-21,13;UBERON:0001262,1.55e-21,13;UBERON:0004786,1.55e-21,13;UBERON:0004923,1.79e-15,24;UBERON:0001007,6.17e-14,116;UBERON:0001555,6.17e-14,116;UBERON:0007026,6.17e-14,116;UBERON:0004119,1.32e-13,118;UBERON:0000925,1.32e-13,118;UBERON:0006595,1.32e-13,118;UBERON:0003350,7.33e-12,9;UBERON:0004808,7.33e-12,9;UBERON:0001277,7.33e-12,9;UBERON:0002108,7.91e-12,4;UBERON:0004921,8.65e-12,114;UBERON:0000485,1.42e-09,11;UBERON:0000331,2.85e-09,3;UBERON:0002116,2.85e-09,3;UBERON:0001204,2.85e-09,3;UBERON:0001168,2.85e-09,3 | |||
|phase1_expression=0,11.1672130444596,10.0099832665698,17.845388467103,16.5295590882295,3.3575854382378,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23989391910769,2.75291137280604,9.18771142584032,3.87685796543167,6.24866574789078,6.46079626151671,5.29263272495855,1.10865255327652,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0.448026887097336,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,7.66371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28670052774077,5.02456076660734,0,0,0.128867461322093,2.01683524623343,1.33426826306922,3.61428689613862,3.32170343081158,1.64698954724011,1.00534083520108,0.596869416123452,1.16978452271472,4.49409704327111,4.75503709724327,4.97853183135918,0,0,0,0,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0.246794327843601,0,0.333690211432188,0.982794975566015,1.57403478669398,0.405720242777006,1.20588579876208,0.50925170356284,0,0.162135226775035,0.549122826376163,0,0.744281895337007,0.936113019343682,1.51547326768267,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,4.37221254944776,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0.218362563746178,0,0.247960367176008,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0.209613162627982,0,0,0,0.320919209591815,0,0.25347929989024,0,0,0.448176066834085,0.17230640686684,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0.263069711437843,0.271608227691724,0,0,0.29551344712669,0.409231043169689,0.309873682371932,0,0,0.467863216890817,0,0,0,0 | |phase1_expression=0,11.1672130444596,10.0099832665698,17.845388467103,16.5295590882295,3.3575854382378,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23989391910769,2.75291137280604,9.18771142584032,3.87685796543167,6.24866574789078,6.46079626151671,5.29263272495855,1.10865255327652,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0.448026887097336,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,7.66371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28670052774077,5.02456076660734,0,0,0.128867461322093,2.01683524623343,1.33426826306922,3.61428689613862,3.32170343081158,1.64698954724011,1.00534083520108,0.596869416123452,1.16978452271472,4.49409704327111,4.75503709724327,4.97853183135918,0,0,0,0,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0.246794327843601,0,0.333690211432188,0.982794975566015,1.57403478669398,0.405720242777006,1.20588579876208,0.50925170356284,0,0.162135226775035,0.549122826376163,0,0.744281895337007,0.936113019343682,1.51547326768267,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,4.37221254944776,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0.218362563746178,0,0.247960367176008,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0.209613162627982,0,0,0,0.320919209591815,0,0.25347929989024,0,0,0.448176066834085,0.17230640686684,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0.263069711437843,0.271608227691724,0,0,0.29551344712669,0.409231043169689,0.309873682371932,0,0,0.467863216890817,0,0,0,0 | ||
|short_description=p@chr11:117066159..117066175,+ | |short_description=p@chr11:117066159..117066175,+ | ||
}} | }} |
Latest revision as of 12:46, 5 August 2015
Short description: | p@chr11:117066159..117066175, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:117066159..117066175, + |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.82e-18 | 6 |
gut absorptive cell | 3.82e-18 | 6 |
enterocyte | 3.82e-18 | 6 |
columnar/cuboidal epithelial cell | 1.87e-15 | 7 |
intestinal epithelial cell | 7.33e-12 | 9 |
epithelial cell of alimentary canal | 7.33e-12 | 9 |
M cell of gut | 9.31e-10 | 3 |
epithelial cell | 2.10e-08 | 25 |
endo-epithelial cell | 7.95e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.67e-45 | 31 |
gastrointestinal system | 5.84e-28 | 47 |
mucosa | 2.82e-26 | 15 |
intestinal mucosa | 1.55e-21 | 13 |
wall of intestine | 1.55e-21 | 13 |
gastrointestinal system mucosa | 1.55e-21 | 13 |
organ component layer | 1.79e-15 | 24 |
digestive system | 6.17e-14 | 116 |
digestive tract | 6.17e-14 | 116 |
primitive gut | 6.17e-14 | 116 |
endoderm-derived structure | 1.32e-13 | 118 |
endoderm | 1.32e-13 | 118 |
presumptive endoderm | 1.32e-13 | 118 |
epithelium of mucosa | 7.33e-12 | 9 |
gastrointestinal system epithelium | 7.33e-12 | 9 |
intestinal epithelium | 7.33e-12 | 9 |
small intestine | 7.91e-12 | 4 |
subdivision of digestive tract | 8.65e-12 | 114 |
simple columnar epithelium | 1.42e-09 | 11 |
ileal mucosa | 2.85e-09 | 3 |
ileum | 2.85e-09 | 3 |
mucosa of small intestine | 2.85e-09 | 3 |
wall of small intestine | 2.85e-09 | 3 |