FFCP PHASE1:Mm9::chr1:74762845..74762849,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:74762845..74762849,+ | |||
|description=CAGE_peak_at_chr1:74762845..74762849,+ | |description=CAGE_peak_at_chr1:74762845..74762849,+ | ||
|id=chr1:74762845..74762849,+ | |id=chr1:74762845..74762849,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.50e-11,5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!3.96e-10!47;UBERON:0005172!1.80e-08!49;UBERON:0005173!1.80e-08!49;UBERON:0002417!1.80e-08!49;UBERON:0000916!1.80e-08!49;UBERON:0002107!2.80e-08!22;UBERON:0007499!2.80e-08!22;UBERON:0006925!2.80e-08!22;UBERON:0009497!2.80e-08!22;UBERON:0000015!2.80e-08!22;UBERON:0002423!2.80e-08!22;UBERON:0006235!2.80e-08!22;UBERON:0008835!2.80e-08!22;UBERON:0003894!2.80e-08!22;UBERON:0004161!2.80e-08!22;UBERON:0008836!2.80e-08!22;UBERON:0009854!1.41e-07!23;UBERON:0009856!1.41e-07!23;UBERON:0009569!2.63e-07!66;UBERON:0000466!3.83e-07!79;UBERON:0002365!4.14e-07!25;UBERON:0002330!4.14e-07!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.98e-27,22;UBERON:0007499,5.98e-27,22;UBERON:0006925,5.98e-27,22;UBERON:0009497,5.98e-27,22;UBERON:0000015,5.98e-27,22;UBERON:0002423,5.98e-27,22;UBERON:0006235,5.98e-27,22;UBERON:0008835,5.98e-27,22;UBERON:0003894,5.98e-27,22;UBERON:0004161,5.98e-27,22;UBERON:0008836,5.98e-27,22;UBERON:0009854,1.18e-25,23;UBERON:0009856,1.18e-25,23;UBERON:0002365,2.25e-23,25;UBERON:0002330,2.25e-23,25;UBERON:0005256,2.05e-15,45;UBERON:0003914,1.28e-14,47;UBERON:0005172,3.93e-12,49;UBERON:0005173,3.93e-12,49;UBERON:0002417,3.93e-12,49;UBERON:0000916,3.93e-12,49;UBERON:0003929,1.59e-10,55;UBERON:0003104,1.62e-10,61;UBERON:0009142,1.62e-10,61;UBERON:0000490,1.62e-09,66;UBERON:0002368,1.82e-09,60;UBERON:0002530,1.66e-08,65;UBERON:0009569,3.16e-08,66;UBERON:0005911,8.93e-08,69;UBERON:0000949,2.19e-07,72 | |||
|phase1_expression=0,0,0,1.20985684522732,0,0,0,0,0,0,0,0,0,0,0.999329285446988,0.202475267389826,0,0.473193248037357,0.137114433605739,0.84877930359606,0.340173160604279,0,0,0.159992422793407,0,0,0,0,0,0.756090389279792,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0.7813353445238,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0.167782606057736,0,0,0.257259436035947,1.14613375975503,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0,0,0,0,1.15945795480671,5.16254326188832,0,5.93673510801599,10.3964226791627,7.6164570806547,0.561777680527007,0,0,0,0,0,0,0,0,0,0,3.4255163915718,0,0.148442139064825,0,0,0.230615497256059,0,0.470354828542819,0,0.494389935468748,0.289198713839823,0,0.161766849947409,0,0.969750506270444,0,0,0.41889341362691,1.53274233125155,0.11981512450592,0,0,0,0,0,0.173824320192276,0,0.41557608911912,0.324482526135515,0.407357455401265,0.870848794270651,1.0108910337347,0.420883711772948,0,0,0,0,0.136072998302656,0.2562274405697,0,1.03481348295606,0.431135985865684,0,0,0,0.556094498451196,0.348252166522167,0,0.398068533636986,0,0.257347907114715,0,0,0.234526059981096,0.720248245844059,0,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0.583826711835847,0,0.985004784474571,0.56748166682099,0.146199987425332,0.439100230582101,0.939444931322602,0.420579897128254,0,0.991256348951394,0.528901133327089,0,0.232236671860439,0,0,0,0.190225626112559,0.949058123089023,0.329397909448022,0.251335208800269,0.397912944082302,0.19496408711912,0.898819408654221,1.29682829924817,0.995706366271836,0,0,0,0.407302655690628,0.581857461502877,0.280543279561274,0.189709611372772,0.590440591918409,0.156998727841375,0.123397163921801,4.15033677922008,0,0.196558995113203,0.224862112384854,0,0,0.25462585178142,1.15078454980324,2.43202840162553,0.549122826376163,1.43768206527355,1.11642284300551,1.24815069245824,5.55673531483646,6.09951205974501,1.4473305640901,0.369506380333209,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0.664394068946325,0.637819074629948,0.655453258862952,0.863424909329478,0.578596234326046,0,0.54390568381871,0,0.275936746304732,0.321101179975584,0.468846746368813,0,2.52470927204373,0,0,0,0.238968797952552,0,0,0,0.876767573733936,0.395287777946524,0.321321316421807,0.567760340833074,0,0,0.494910368917606,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0,0,0,2.38307724027652,0.18006109403131,0,0,0,0.356737635204141,0.987294123612726,0.304464949114599,0,0,0.220528398054962,0.8244312647074,0.322928853391811,0.241251699712623,0.119372344003136,0.164140899745061,1.7488850197791,0.927126510052548,0,0.206386867963223,0.185194527369712,0.376736914009382,0.546776910884101,0.915112692826091,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0.269728692769641,0.41326727862668,0.26175594198403,0.777689839750757,0,0,0.149516546043979,0,0.194451188344048,0.387479470433193,0.506868376472335,2.46450201156083,1.3020438484395,1.25831213310853,0.241584120826006,1.44015003128933,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.194915761479505,0,0,0.453460767230423,0,0,0,0.772758376128762,0.187682475451182,0.36630324853453,0.643105137237198,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0.50695859978048,0,0.187283014939765,0.128050304809739,0.0574354689556133,0.476293691283074,0.115884325944855,0.192909220463705,0,0,0,0,0,0.145346416632329,0.188218760830661,0.0846146078916765,0,0.526139422875686,0,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0,0.467863216890817,0,0,0,0 | |phase1_expression=0,0,0,1.20985684522732,0,0,0,0,0,0,0,0,0,0,0.999329285446988,0.202475267389826,0,0.473193248037357,0.137114433605739,0.84877930359606,0.340173160604279,0,0,0.159992422793407,0,0,0,0,0,0.756090389279792,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0.7813353445238,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0.167782606057736,0,0,0.257259436035947,1.14613375975503,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0,0,0,0,1.15945795480671,5.16254326188832,0,5.93673510801599,10.3964226791627,7.6164570806547,0.561777680527007,0,0,0,0,0,0,0,0,0,0,3.4255163915718,0,0.148442139064825,0,0,0.230615497256059,0,0.470354828542819,0,0.494389935468748,0.289198713839823,0,0.161766849947409,0,0.969750506270444,0,0,0.41889341362691,1.53274233125155,0.11981512450592,0,0,0,0,0,0.173824320192276,0,0.41557608911912,0.324482526135515,0.407357455401265,0.870848794270651,1.0108910337347,0.420883711772948,0,0,0,0,0.136072998302656,0.2562274405697,0,1.03481348295606,0.431135985865684,0,0,0,0.556094498451196,0.348252166522167,0,0.398068533636986,0,0.257347907114715,0,0,0.234526059981096,0.720248245844059,0,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0.583826711835847,0,0.985004784474571,0.56748166682099,0.146199987425332,0.439100230582101,0.939444931322602,0.420579897128254,0,0.991256348951394,0.528901133327089,0,0.232236671860439,0,0,0,0.190225626112559,0.949058123089023,0.329397909448022,0.251335208800269,0.397912944082302,0.19496408711912,0.898819408654221,1.29682829924817,0.995706366271836,0,0,0,0.407302655690628,0.581857461502877,0.280543279561274,0.189709611372772,0.590440591918409,0.156998727841375,0.123397163921801,4.15033677922008,0,0.196558995113203,0.224862112384854,0,0,0.25462585178142,1.15078454980324,2.43202840162553,0.549122826376163,1.43768206527355,1.11642284300551,1.24815069245824,5.55673531483646,6.09951205974501,1.4473305640901,0.369506380333209,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0.664394068946325,0.637819074629948,0.655453258862952,0.863424909329478,0.578596234326046,0,0.54390568381871,0,0.275936746304732,0.321101179975584,0.468846746368813,0,2.52470927204373,0,0,0,0.238968797952552,0,0,0,0.876767573733936,0.395287777946524,0.321321316421807,0.567760340833074,0,0,0.494910368917606,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0,0,0,2.38307724027652,0.18006109403131,0,0,0,0.356737635204141,0.987294123612726,0.304464949114599,0,0,0.220528398054962,0.8244312647074,0.322928853391811,0.241251699712623,0.119372344003136,0.164140899745061,1.7488850197791,0.927126510052548,0,0.206386867963223,0.185194527369712,0.376736914009382,0.546776910884101,0.915112692826091,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0.269728692769641,0.41326727862668,0.26175594198403,0.777689839750757,0,0,0.149516546043979,0,0.194451188344048,0.387479470433193,0.506868376472335,2.46450201156083,1.3020438484395,1.25831213310853,0.241584120826006,1.44015003128933,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.194915761479505,0,0,0.453460767230423,0,0,0,0.772758376128762,0.187682475451182,0.36630324853453,0.643105137237198,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0.50695859978048,0,0.187283014939765,0.128050304809739,0.0574354689556133,0.476293691283074,0.115884325944855,0.192909220463705,0,0,0,0,0,0.145346416632329,0.188218760830661,0.0846146078916765,0,0.526139422875686,0,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0,0.467863216890817,0,0,0,0 | ||
|short_description=p@chr1:74762845..74762849,+ | |short_description=p@chr1:74762845..74762849,+ | ||
}} | }} |
Latest revision as of 00:19, 6 August 2015
Short description: | p@chr1:74762845..74762849, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:74762845..74762849, + |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.50e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 5.98e-27 | 22 |
epithelial sac | 5.98e-27 | 22 |
digestive gland | 5.98e-27 | 22 |
epithelium of foregut-midgut junction | 5.98e-27 | 22 |
anatomical boundary | 5.98e-27 | 22 |
hepatobiliary system | 5.98e-27 | 22 |
foregut-midgut junction | 5.98e-27 | 22 |
hepatic diverticulum | 5.98e-27 | 22 |
liver primordium | 5.98e-27 | 22 |
septum transversum | 5.98e-27 | 22 |
liver bud | 5.98e-27 | 22 |
digestive tract diverticulum | 1.18e-25 | 23 |
sac | 1.18e-25 | 23 |
exocrine gland | 2.25e-23 | 25 |
exocrine system | 2.25e-23 | 25 |
trunk mesenchyme | 2.05e-15 | 45 |
epithelial tube | 1.28e-14 | 47 |
abdomen element | 3.93e-12 | 49 |
abdominal segment element | 3.93e-12 | 49 |
abdominal segment of trunk | 3.93e-12 | 49 |
abdomen | 3.93e-12 | 49 |
gut epithelium | 1.59e-10 | 55 |
mesenchyme | 1.62e-10 | 61 |
entire embryonic mesenchyme | 1.62e-10 | 61 |
unilaminar epithelium | 1.62e-09 | 66 |
endocrine gland | 1.82e-09 | 60 |
gland | 1.66e-08 | 65 |
subdivision of trunk | 3.16e-08 | 66 |
endo-epithelium | 8.93e-08 | 69 |
endocrine system | 2.19e-07 | 72 |