FFCP PHASE1:Mm9::chr4:134478554..134478559,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=451 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:134478554..134478559,+ | |||
|description=CAGE_peak_at_chr4:134478554..134478559,+ | |description=CAGE_peak_at_chr4:134478554..134478559,+ | ||
|id=chr4:134478554..134478559,+ | |id=chr4:134478554..134478559,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.89e-22,6;CL:0000677,1.89e-22,6;CL:0000584,1.89e-22,6;CL:0000075,2.26e-19,7;CL:0000213,3.44e-16,1;CL:0002078,3.44e-16,1;CL:0000115,3.44e-16,1;CL:0002262,3.44e-16,1;CL:1000398,3.44e-16,1;CL:0002563,2.95e-15,9;CL:0002251,2.95e-15,9;CL:0000223,2.94e-12,20;CL:0000066,6.44e-10,25;CL:0002076,1.85e-09,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.67e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.19e-18,13;UBERON:0001262,2.19e-18,13;UBERON:0004786,2.19e-18,13;UBERON:0002394,3.44e-16,1;UBERON:0001281,3.44e-16,1;UBERON:0000353,3.44e-16,1;UBERON:0003497,3.44e-16,1;UBERON:0003909,3.44e-16,1;UBERON:0003928,3.44e-16,1;UBERON:0003835,3.44e-16,1;UBERON:0003513,3.44e-16,1;UBERON:0001280,3.44e-16,1;UBERON:0004647,3.44e-16,1;UBERON:0002294,3.44e-16,1;UBERON:0001173,3.44e-16,1;UBERON:0004912,3.44e-16,1;UBERON:0005171,3.44e-16,1;UBERON:0000344,5.04e-16,15;UBERON:0003350,2.95e-15,9;UBERON:0004808,2.95e-15,9;UBERON:0001277,2.95e-15,9;UBERON:0000485,1.25e-12,11;UBERON:0004923,3.09e-10,24;UBERON:0000160,4.86e-08,31 | |||
|phase1_expression=0,1.04692622291808,0,4.53696316960245,4.00716583957078,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0,0,0,0.159992422793407,0.22940928106717,0,0.430761996159075,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.66688324013859,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.346970653532272,0,0,0.452167921657868,0.23517741427141,0.376999773989026,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0.384341160854549,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0.233530684734339,0,0,0,0.146199987425332,0.219550115291051,0,0,0,1.32167513193519,0.264450566663544,0,0,0,0,0.22237804384487,0,0.474529061544512,0,0,0,0,0,0.432276099749388,0.597423819763102,0,0,1.1270773567308,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0.119372344003136,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.04692622291808,0,4.53696316960245,4.00716583957078,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0,0,0,0.159992422793407,0.22940928106717,0,0.430761996159075,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.66688324013859,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.346970653532272,0,0,0.452167921657868,0.23517741427141,0.376999773989026,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0.384341160854549,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0.233530684734339,0,0,0,0.146199987425332,0.219550115291051,0,0,0,1.32167513193519,0.264450566663544,0,0,0,0,0.22237804384487,0,0.474529061544512,0,0,0,0,0,0.432276099749388,0.597423819763102,0,0,1.1270773567308,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0.119372344003136,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:134478554..134478559,+ | |short_description=p@chr4:134478554..134478559,+ | ||
}} | }} |
Latest revision as of 22:53, 4 August 2015
Short description: | p@chr4:134478554..134478559, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:134478554..134478559, + |
Coexpression cluster: | MCL_coexpression_mm9:451 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.89e-22 | 6 |
gut absorptive cell | 1.89e-22 | 6 |
enterocyte | 1.89e-22 | 6 |
columnar/cuboidal epithelial cell | 2.26e-19 | 7 |
lining cell | 3.44e-16 | 1 |
meso-epithelial cell | 3.44e-16 | 1 |
endothelial cell | 3.44e-16 | 1 |
endothelial cell of sinusoid | 3.44e-16 | 1 |
endothelial cell of hepatic sinusoid | 3.44e-16 | 1 |
intestinal epithelial cell | 2.95e-15 | 9 |
epithelial cell of alimentary canal | 2.95e-15 | 9 |
endodermal cell | 2.94e-12 | 20 |
epithelial cell | 6.44e-10 | 25 |
endo-epithelial cell | 1.85e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 2.19e-18 | 13 |
wall of intestine | 2.19e-18 | 13 |
gastrointestinal system mucosa | 2.19e-18 | 13 |
bile duct | 3.44e-16 | 1 |
hepatic sinusoid | 3.44e-16 | 1 |
parenchyma | 3.44e-16 | 1 |
abdomen blood vessel | 3.44e-16 | 1 |
sinusoid | 3.44e-16 | 1 |
digestive system duct | 3.44e-16 | 1 |
abdominal segment blood vessel | 3.44e-16 | 1 |
trunk blood vessel | 3.44e-16 | 1 |
liver parenchyma | 3.44e-16 | 1 |
liver lobule | 3.44e-16 | 1 |
biliary system | 3.44e-16 | 1 |
biliary tree | 3.44e-16 | 1 |
biliary bud | 3.44e-16 | 1 |
hepatic duct | 3.44e-16 | 1 |
mucosa | 5.04e-16 | 15 |
epithelium of mucosa | 2.95e-15 | 9 |
gastrointestinal system epithelium | 2.95e-15 | 9 |
intestinal epithelium | 2.95e-15 | 9 |
simple columnar epithelium | 1.25e-12 | 11 |
organ component layer | 3.09e-10 | 24 |
intestine | 4.86e-08 | 31 |