FFCP PHASE1:Mm9::chr4:138388852..138388863,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=499 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-310bp_to_ENSMUST00000147728_5end | |association_with_transcript=-310bp_to_ENSMUST00000147728_5end | ||
|cluster_id=chr4:138388852..138388863,+ | |||
|description=CAGE_peak_4_at_ENSMUST00000147728_5end | |description=CAGE_peak_4_at_ENSMUST00000147728_5end | ||
|id=chr4:138388852..138388863,+ | |id=chr4:138388852..138388863,+ | ||
|ontology_enrichment_celltype=CL:0000239!6.12e-16!6;CL:0000677!6.12e-16!6;CL:0000212!6.12e-16!6;CL:0000584!6.12e-16!6;CL:0000075!1.05e-13!7;CL:0002563!1.03e-10!9;CL:0002251!1.03e-10!9;CL:0000473!6.48e-09!3;CL:0000627!6.48e-09!3;CL:0000682!6.48e-09!3;CL:0000066!3.50e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.04e-07,6;CL:0000677,2.04e-07,6;CL:0000584,2.04e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.14e-38!15;UBERON:0001242!2.00e-28!13;UBERON:0000060!2.00e-28!13;UBERON:0001262!2.00e-28!13;UBERON:0004786!2.00e-28!13;UBERON:0004923!1.30e-23!24;UBERON:0000331!5.18e-19!3;UBERON:0002116!5.18e-19!3;UBERON:0001204!5.18e-19!3;UBERON:0001168!5.18e-19!3;UBERON:0001962!6.36e-13!2;UBERON:0001961!6.36e-13!2;UBERON:0001744!6.36e-13!2;UBERON:0003350!1.03e-10!9;UBERON:0004808!1.03e-10!9;UBERON:0001277!1.03e-10!9;UBERON:0000160!2.96e-10!43;UBERON:0002465!6.48e-09!3;UBERON:0000485!8.35e-09!11;UBERON:0003199!3.20e-07!1;UBERON:0005409!3.50e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.93e-31,15;UBERON:0000331,5.70e-30,3;UBERON:0002116,5.70e-30,3;UBERON:0001204,5.70e-30,3;UBERON:0001168,5.70e-30,3;UBERON:0002108,1.10e-22,4;UBERON:0001962,4.89e-20,2;UBERON:0001961,4.89e-20,2;UBERON:0001744,4.89e-20,2;UBERON:0004923,1.17e-19,24;UBERON:0001242,6.22e-19,13;UBERON:0001262,6.22e-19,13;UBERON:0004786,6.22e-19,13;UBERON:0002465,1.04e-13,3;UBERON:0000160,2.26e-11,31;UBERON:0003199,8.99e-11,1;UBERON:0005409,1.79e-07,47;UBERON:0007023,7.65e-07,51 | |||
|phase1_expression=0,0.348975407639361,0,0.30246421130683,0,1.6787927191189,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3998863419011,1.83527424853736,0,0.86152399231815,3.01659725760245,7.41091335879858,2.52030129759931,2.21730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,4.23120906661671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.348975407639361,0,0.30246421130683,0,1.6787927191189,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3998863419011,1.83527424853736,0,0.86152399231815,3.01659725760245,7.41091335879858,2.52030129759931,2.21730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,4.23120906661671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@ENSMUST00000147728 | |short_description=p4@ENSMUST00000147728 | ||
}} | }} |
Latest revision as of 01:13, 5 August 2015
Short description: | p4@ENSMUST00000147728 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ENSMUST00000147728_5end |
Coexpression cluster: | MCL_coexpression_mm9:499 |
Association with transcript: | -310bp_to_ENSMUST00000147728_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.04e-07 | 6 |
gut absorptive cell | 2.04e-07 | 6 |
enterocyte | 2.04e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.93e-31 | 15 |
ileal mucosa | 5.70e-30 | 3 |
ileum | 5.70e-30 | 3 |
mucosa of small intestine | 5.70e-30 | 3 |
wall of small intestine | 5.70e-30 | 3 |
small intestine | 1.10e-22 | 4 |
gut-associated lymphoid tissue | 4.89e-20 | 2 |
mucosa-associated lymphoid tissue | 4.89e-20 | 2 |
lymphoid tissue | 4.89e-20 | 2 |
organ component layer | 1.17e-19 | 24 |
intestinal mucosa | 6.22e-19 | 13 |
wall of intestine | 6.22e-19 | 13 |
gastrointestinal system mucosa | 6.22e-19 | 13 |
lymphoid system | 1.04e-13 | 3 |
intestine | 2.26e-11 | 31 |
egg chamber | 8.99e-11 | 1 |
gastrointestinal system | 1.79e-07 | 47 |
adult organism | 7.65e-07 | 51 |