FFCP PHASE1:Mm9::chr4:19936514..19936553,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:19936514..19936553,+ | |||
|description=CAGE_peak_at_chr4:19936514..19936553,+ | |description=CAGE_peak_at_chr4:19936514..19936553,+ | ||
|id=chr4:19936514..19936553,+ | |id=chr4:19936514..19936553,+ | ||
|ontology_enrichment_celltype=CL:0000181!4.59e-21!5;CL:0000417!4.59e-21!5;CL:0000668!4.59e-21!5;CL:0000412!4.59e-21!5;CL:0000182!4.59e-21!5;CL:0000414!1.80e-09!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.35e-24,5;CL:0000057,7.41e-09,1;CL:0000632,7.41e-09,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.75e-35!22;UBERON:0007499!4.75e-35!22;UBERON:0006925!4.75e-35!22;UBERON:0009497!4.75e-35!22;UBERON:0000015!4.75e-35!22;UBERON:0002423!4.75e-35!22;UBERON:0006235!4.75e-35!22;UBERON:0008835!4.75e-35!22;UBERON:0003894!4.75e-35!22;UBERON:0004161!4.75e-35!22;UBERON:0008836!4.75e-35!22;UBERON:0009854!2.01e-33!23;UBERON:0009856!2.01e-33!23;UBERON:0002365!1.47e-30!25;UBERON:0002330!1.47e-30!25;UBERON:0005172!1.34e-16!49;UBERON:0005173!1.34e-16!49;UBERON:0002417!1.34e-16!49;UBERON:0000916!1.34e-16!49;UBERON:0005057!7.63e-16!51;UBERON:0003914!4.11e-15!47;UBERON:0005256!4.11e-15!47;UBERON:0003929!1.49e-12!55;UBERON:0009569!1.23e-11!66;UBERON:0002368!2.68e-11!60;UBERON:0002405!8.08e-11!70;UBERON:0002530!3.10e-10!65;UBERON:0000490!4.83e-10!66;UBERON:0005911!1.70e-09!69;UBERON:0000466!2.80e-09!79;UBERON:0000949!5.38e-09!72;UBERON:0005177!1.96e-08!85;UBERON:0001041!1.38e-07!92;UBERON:0000077!4.70e-07!97;UBERON:0002100!5.91e-07!98 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.33e-32,22;UBERON:0007499,1.33e-32,22;UBERON:0006925,1.33e-32,22;UBERON:0009497,1.33e-32,22;UBERON:0000015,1.33e-32,22;UBERON:0002423,1.33e-32,22;UBERON:0006235,1.33e-32,22;UBERON:0008835,1.33e-32,22;UBERON:0003894,1.33e-32,22;UBERON:0004161,1.33e-32,22;UBERON:0008836,1.33e-32,22;UBERON:0009854,3.71e-31,23;UBERON:0009856,3.71e-31,23;UBERON:0002365,1.30e-28,25;UBERON:0002330,1.30e-28,25;UBERON:0005256,1.44e-15,45;UBERON:0003914,7.19e-15,47;UBERON:0005172,3.14e-14,49;UBERON:0005173,3.14e-14,49;UBERON:0002417,3.14e-14,49;UBERON:0000916,3.14e-14,49;UBERON:0003929,1.39e-12,55;UBERON:0002368,1.83e-11,60;UBERON:0003104,2.92e-11,61;UBERON:0009142,2.92e-11,61;UBERON:0002530,1.64e-10,65;UBERON:0000490,2.44e-10,66;UBERON:0009569,2.44e-10,66;UBERON:0005911,7.53e-10,69;UBERON:0000949,2.12e-09,72;UBERON:0005177,1.75e-08,79;UBERON:0001041,2.30e-08,80;UBERON:0002100,2.52e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,12.0459342777394,1.3599426674155,5.39703191637817,15.5946340187441,23.2973981290615,1.96622188184453,0,0,0,0,0,0,0,0,0,0,9.02052649780574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.5658733877518,0,0,0,0,0,0,0.287696137450811,0,0,1.43768206527355,0.372140947668503,0.624075346229121,5.55673531483646,8.43167843552987,9.16642690590398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,12.0459342777394,1.3599426674155,5.39703191637817,15.5946340187441,23.2973981290615,1.96622188184453,0,0,0,0,0,0,0,0,0,0,9.02052649780574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.5658733877518,0,0,0,0,0,0,0.287696137450811,0,0,1.43768206527355,0.372140947668503,0.624075346229121,5.55673531483646,8.43167843552987,9.16642690590398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr4:19936514..19936553,+ | |short_description=p@chr4:19936514..19936553,+ | ||
}} | }} |
Latest revision as of 08:34, 5 August 2015
Short description: | p@chr4:19936514..19936553, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:19936514..19936553, + |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.35e-24 | 5 |
fibroblast | 7.41e-09 | 1 |
hepatic stellate cell | 7.41e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
liver | 1.33e-32 | 22 |
epithelial sac | 1.33e-32 | 22 |
digestive gland | 1.33e-32 | 22 |
epithelium of foregut-midgut junction | 1.33e-32 | 22 |
anatomical boundary | 1.33e-32 | 22 |
hepatobiliary system | 1.33e-32 | 22 |
foregut-midgut junction | 1.33e-32 | 22 |
hepatic diverticulum | 1.33e-32 | 22 |
liver primordium | 1.33e-32 | 22 |
septum transversum | 1.33e-32 | 22 |
liver bud | 1.33e-32 | 22 |
digestive tract diverticulum | 3.71e-31 | 23 |
sac | 3.71e-31 | 23 |
exocrine gland | 1.30e-28 | 25 |
exocrine system | 1.30e-28 | 25 |
trunk mesenchyme | 1.44e-15 | 45 |
epithelial tube | 7.19e-15 | 47 |
abdomen element | 3.14e-14 | 49 |
abdominal segment element | 3.14e-14 | 49 |
abdominal segment of trunk | 3.14e-14 | 49 |
abdomen | 3.14e-14 | 49 |
gut epithelium | 1.39e-12 | 55 |
endocrine gland | 1.83e-11 | 60 |
mesenchyme | 2.92e-11 | 61 |
entire embryonic mesenchyme | 2.92e-11 | 61 |
gland | 1.64e-10 | 65 |
unilaminar epithelium | 2.44e-10 | 66 |
subdivision of trunk | 2.44e-10 | 66 |
endo-epithelium | 7.53e-10 | 69 |
endocrine system | 2.12e-09 | 72 |
trunk region element | 1.75e-08 | 79 |
foregut | 2.30e-08 | 80 |
trunk | 2.52e-07 | 90 |