FFCP PHASE1:Mm9::chr12:105583499..105583521,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=73 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:105583499..105583521,+ | |||
|description=CAGE_peak_at_chr12:105583499..105583521,+ | |description=CAGE_peak_at_chr12:105583499..105583521,+ | ||
|id=chr12:105583499..105583521,+ | |id=chr12:105583499..105583521,+ | ||
|ontology_enrichment_celltype=CL:0000181!3.65e-17!5;CL:0000417!3.65e-17!5;CL:0000668!3.65e-17!5;CL:0000412!3.65e-17!5;CL:0000182!3.65e-17!5;CL:0000414!7.01e-08!11 | |ontology_enrichment_celltype=CL:0000181!3.65e-17!5;CL:0000417!3.65e-17!5;CL:0000668!3.65e-17!5;CL:0000412!3.65e-17!5;CL:0000182!3.65e-17!5;CL:0000414!7.01e-08!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.16e-26,5;CL:0000057,1.44e-09,1;CL:0000632,1.44e-09,1;CL:0000223,6.77e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.28e-31!22;UBERON:0007499!3.28e-31!22;UBERON:0006925!3.28e-31!22;UBERON:0009497!3.28e-31!22;UBERON:0000015!3.28e-31!22;UBERON:0002423!3.28e-31!22;UBERON:0006235!3.28e-31!22;UBERON:0008835!3.28e-31!22;UBERON:0003894!3.28e-31!22;UBERON:0004161!3.28e-31!22;UBERON:0008836!3.28e-31!22;UBERON:0009854!8.79e-30!23;UBERON:0009856!8.79e-30!23;UBERON:0002365!2.88e-27!25;UBERON:0002330!2.88e-27!25;UBERON:0003914!1.09e-13!47;UBERON:0005256!1.09e-13!47;UBERON:0005172!4.65e-13!49;UBERON:0005173!4.65e-13!49;UBERON:0002417!4.65e-13!49;UBERON:0000916!4.65e-13!49;UBERON:0005057!1.78e-12!51;UBERON:0003929!1.95e-11!55;UBERON:0002368!2.48e-10!60;UBERON:0002530!2.14e-09!65;UBERON:0000490!3.17e-09!66;UBERON:0009569!3.17e-09!66;UBERON:0005911!9.62e-09!69;UBERON:0002405!1.36e-08!70;UBERON:0000949!2.66e-08!72;UBERON:0000466!2.12e-07!79;UBERON:0001041!2.76e-07!92;UBERON:0000077!8.38e-07!97;UBERON:0005177!9.58e-07!85 | |ontology_enrichment_uberon=UBERON:0002107!3.28e-31!22;UBERON:0007499!3.28e-31!22;UBERON:0006925!3.28e-31!22;UBERON:0009497!3.28e-31!22;UBERON:0000015!3.28e-31!22;UBERON:0002423!3.28e-31!22;UBERON:0006235!3.28e-31!22;UBERON:0008835!3.28e-31!22;UBERON:0003894!3.28e-31!22;UBERON:0004161!3.28e-31!22;UBERON:0008836!3.28e-31!22;UBERON:0009854!8.79e-30!23;UBERON:0009856!8.79e-30!23;UBERON:0002365!2.88e-27!25;UBERON:0002330!2.88e-27!25;UBERON:0003914!1.09e-13!47;UBERON:0005256!1.09e-13!47;UBERON:0005172!4.65e-13!49;UBERON:0005173!4.65e-13!49;UBERON:0002417!4.65e-13!49;UBERON:0000916!4.65e-13!49;UBERON:0005057!1.78e-12!51;UBERON:0003929!1.95e-11!55;UBERON:0002368!2.48e-10!60;UBERON:0002530!2.14e-09!65;UBERON:0000490!3.17e-09!66;UBERON:0009569!3.17e-09!66;UBERON:0005911!9.62e-09!69;UBERON:0002405!1.36e-08!70;UBERON:0000949!2.66e-08!72;UBERON:0000466!2.12e-07!79;UBERON:0001041!2.76e-07!92;UBERON:0000077!8.38e-07!97;UBERON:0005177!9.58e-07!85 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.29e-29,22;UBERON:0007499,5.29e-29,22;UBERON:0006925,5.29e-29,22;UBERON:0009497,5.29e-29,22;UBERON:0000015,5.29e-29,22;UBERON:0002423,5.29e-29,22;UBERON:0006235,5.29e-29,22;UBERON:0008835,5.29e-29,22;UBERON:0003894,5.29e-29,22;UBERON:0004161,5.29e-29,22;UBERON:0008836,5.29e-29,22;UBERON:0009854,1.01e-27,23;UBERON:0009856,1.01e-27,23;UBERON:0002365,1.80e-25,25;UBERON:0002330,1.80e-25,25;UBERON:0005256,6.49e-14,45;UBERON:0003914,2.69e-13,47;UBERON:0005172,9.95e-13,49;UBERON:0005173,9.95e-13,49;UBERON:0002417,9.95e-13,49;UBERON:0000916,9.95e-13,49;UBERON:0003929,2.86e-11,55;UBERON:0002368,2.82e-10,60;UBERON:0003104,4.27e-10,61;UBERON:0009142,4.27e-10,61;UBERON:0002530,1.97e-09,65;UBERON:0000490,2.80e-09,66;UBERON:0009569,2.80e-09,66;UBERON:0005911,7.62e-09,69;UBERON:0000949,1.91e-08,72;UBERON:0005177,1.25e-07,79;UBERON:0001041,1.59e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.8356834483113,23.7989966797713,70.701118104554,35.7377029596218,12.9927797258227,4.91555470461132,0,0,0,0,0,0,0,0,0,0,6.62266502370548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.30067355844017,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,1.01031551178845,7.17589654087649,6.27176577772377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.8356834483113,23.7989966797713,70.701118104554,35.7377029596218,12.9927797258227,4.91555470461132,0,0,0,0,0,0,0,0,0,0,6.62266502370548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.30067355844017,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,1.01031551178845,7.17589654087649,6.27176577772377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:105583499..105583521,+ | |short_description=p@chr12:105583499..105583521,+ | ||
}} | }} |
Latest revision as of 15:29, 4 August 2015
Short description: | p@chr12:105583499..105583521, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:105583499..105583521, + |
Coexpression cluster: | MCL_coexpression_mm9:73 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.16e-26 | 5 |
fibroblast | 1.44e-09 | 1 |
hepatic stellate cell | 1.44e-09 | 1 |
endodermal cell | 6.77e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
liver | 5.29e-29 | 22 |
epithelial sac | 5.29e-29 | 22 |
digestive gland | 5.29e-29 | 22 |
epithelium of foregut-midgut junction | 5.29e-29 | 22 |
anatomical boundary | 5.29e-29 | 22 |
hepatobiliary system | 5.29e-29 | 22 |
foregut-midgut junction | 5.29e-29 | 22 |
hepatic diverticulum | 5.29e-29 | 22 |
liver primordium | 5.29e-29 | 22 |
septum transversum | 5.29e-29 | 22 |
liver bud | 5.29e-29 | 22 |
digestive tract diverticulum | 1.01e-27 | 23 |
sac | 1.01e-27 | 23 |
exocrine gland | 1.80e-25 | 25 |
exocrine system | 1.80e-25 | 25 |
trunk mesenchyme | 6.49e-14 | 45 |
epithelial tube | 2.69e-13 | 47 |
abdomen element | 9.95e-13 | 49 |
abdominal segment element | 9.95e-13 | 49 |
abdominal segment of trunk | 9.95e-13 | 49 |
abdomen | 9.95e-13 | 49 |
gut epithelium | 2.86e-11 | 55 |
endocrine gland | 2.82e-10 | 60 |
mesenchyme | 4.27e-10 | 61 |
entire embryonic mesenchyme | 4.27e-10 | 61 |
gland | 1.97e-09 | 65 |
unilaminar epithelium | 2.80e-09 | 66 |
subdivision of trunk | 2.80e-09 | 66 |
endo-epithelium | 7.62e-09 | 69 |
endocrine system | 1.91e-08 | 72 |
trunk region element | 1.25e-07 | 79 |
foregut | 1.59e-07 | 80 |