FFCP PHASE1:Mm9::chr5:152209075..152209086,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc009aur.1_5end | |association_with_transcript=0bp_to_uc009aur.1_5end | ||
|cluster_id=chr5:152209075..152209086,+ | |||
|description=CAGE_peak_1_at_uc009aur.1_5end | |description=CAGE_peak_1_at_uc009aur.1_5end | ||
|id=chr5:152209075..152209086,+ | |id=chr5:152209075..152209086,+ | ||
|ontology_enrichment_celltype=CL:0000181!5.48e-19!5;CL:0000417!5.48e-19!5;CL:0000668!5.48e-19!5;CL:0000412!5.48e-19!5;CL:0000182!5.48e-19!5;CL:0000414!9.70e-09!11;CL:0000057!4.10e-07!1;CL:0000632!4.10e-07!1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.02e-29,5;CL:0000057,3.04e-10,1;CL:0000632,3.04e-10,1;CL:0000223,1.58e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.19e-29!22;UBERON:0007499!1.19e-29!22;UBERON:0006925!1.19e-29!22;UBERON:0009497!1.19e-29!22;UBERON:0000015!1.19e-29!22;UBERON:0002423!1.19e-29!22;UBERON:0006235!1.19e-29!22;UBERON:0008835!1.19e-29!22;UBERON:0003894!1.19e-29!22;UBERON:0004161!1.19e-29!22;UBERON:0008836!1.19e-29!22;UBERON:0009854!2.63e-28!23;UBERON:0009856!2.63e-28!23;UBERON:0002365!6.15e-26!25;UBERON:0002330!6.15e-26!25;UBERON:0003914!3.82e-13!47;UBERON:0005256!3.82e-13!47;UBERON:0005172!1.51e-12!49;UBERON:0005173!1.51e-12!49;UBERON:0002417!1.51e-12!49;UBERON:0000916!1.51e-12!49;UBERON:0005057!5.34e-12!51;UBERON:0003929!5.10e-11!55;UBERON:0002368!5.63e-10!60;UBERON:0002530!4.31e-09!65;UBERON:0000490!6.24e-09!66;UBERON:0009569!6.24e-09!66;UBERON:0001041!1.40e-08!92;UBERON:0005911!1.78e-08!69;UBERON:0002405!2.47e-08!70;UBERON:0000949!4.64e-08!72;UBERON:0000077!4.83e-08!97;UBERON:0000466!3.30e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.68e-32,22;UBERON:0007499,6.68e-32,22;UBERON:0006925,6.68e-32,22;UBERON:0009497,6.68e-32,22;UBERON:0000015,6.68e-32,22;UBERON:0002423,6.68e-32,22;UBERON:0006235,6.68e-32,22;UBERON:0008835,6.68e-32,22;UBERON:0003894,6.68e-32,22;UBERON:0004161,6.68e-32,22;UBERON:0008836,6.68e-32,22;UBERON:0009854,1.67e-30,23;UBERON:0009856,1.67e-30,23;UBERON:0002365,4.81e-28,25;UBERON:0002330,4.81e-28,25;UBERON:0005256,1.99e-15,45;UBERON:0003914,9.41e-15,47;UBERON:0005172,3.92e-14,49;UBERON:0005173,3.92e-14,49;UBERON:0002417,3.92e-14,49;UBERON:0000916,3.92e-14,49;UBERON:0003929,1.53e-12,55;UBERON:0002368,1.86e-11,60;UBERON:0003104,2.92e-11,61;UBERON:0009142,2.92e-11,61;UBERON:0002530,1.55e-10,65;UBERON:0000490,2.28e-10,66;UBERON:0009569,2.28e-10,66;UBERON:0005911,6.77e-10,69;UBERON:0000949,1.84e-09,72;UBERON:0005177,1.43e-08,79;UBERON:0001041,1.85e-08,80;UBERON:0002100,1.88e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.0229671388697,2.719885334831,7.55584468292944,8.4470934268197,11.2006721774334,0.983110940922263,0,0,0,0,0,0,0,0,0,0,2.51204535381932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.74324203339438,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.936113019343682,2.27320990152401,4.4849353380478,1.92977408545347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.0229671388697,2.719885334831,7.55584468292944,8.4470934268197,11.2006721774334,0.983110940922263,0,0,0,0,0,0,0,0,0,0,2.51204535381932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.74324203339438,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.936113019343682,2.27320990152401,4.4849353380478,1.92977408545347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@uc009aur.1 | |short_description=p1@uc009aur.1 | ||
}} | }} |
Latest revision as of 03:33, 4 August 2015
Short description: | p1@uc009aur.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc009aur.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_uc009aur.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.02e-29 | 5 |
fibroblast | 3.04e-10 | 1 |
hepatic stellate cell | 3.04e-10 | 1 |
endodermal cell | 1.58e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
liver | 6.68e-32 | 22 |
epithelial sac | 6.68e-32 | 22 |
digestive gland | 6.68e-32 | 22 |
epithelium of foregut-midgut junction | 6.68e-32 | 22 |
anatomical boundary | 6.68e-32 | 22 |
hepatobiliary system | 6.68e-32 | 22 |
foregut-midgut junction | 6.68e-32 | 22 |
hepatic diverticulum | 6.68e-32 | 22 |
liver primordium | 6.68e-32 | 22 |
septum transversum | 6.68e-32 | 22 |
liver bud | 6.68e-32 | 22 |
digestive tract diverticulum | 1.67e-30 | 23 |
sac | 1.67e-30 | 23 |
exocrine gland | 4.81e-28 | 25 |
exocrine system | 4.81e-28 | 25 |
trunk mesenchyme | 1.99e-15 | 45 |
epithelial tube | 9.41e-15 | 47 |
abdomen element | 3.92e-14 | 49 |
abdominal segment element | 3.92e-14 | 49 |
abdominal segment of trunk | 3.92e-14 | 49 |
abdomen | 3.92e-14 | 49 |
gut epithelium | 1.53e-12 | 55 |
endocrine gland | 1.86e-11 | 60 |
mesenchyme | 2.92e-11 | 61 |
entire embryonic mesenchyme | 2.92e-11 | 61 |
gland | 1.55e-10 | 65 |
unilaminar epithelium | 2.28e-10 | 66 |
subdivision of trunk | 2.28e-10 | 66 |
endo-epithelium | 6.77e-10 | 69 |
endocrine system | 1.84e-09 | 72 |
trunk region element | 1.43e-08 | 79 |
foregut | 1.85e-08 | 80 |
trunk | 1.88e-07 | 90 |