FFCP PHASE1:Mm9::chr2:90875770..90875789,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19400 | |EntrezGene=19400 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=35 | |||
|TSSclassifier=NA | |||
|UniProt=A2AFX4,A2AFX6,P12672 | |UniProt=A2AFX4,A2AFX6,P12672 | ||
|association_with_transcript=0bp_to_ENSMUST00000111445,ENSMUST00000111446,NM_009023,uc008kud.2,uc012bzc.1_5end | |association_with_transcript=0bp_to_ENSMUST00000111445,ENSMUST00000111446,NM_009023,uc008kud.2,uc012bzc.1_5end | ||
|cluster_id=chr2:90875770..90875789,+ | |||
|description=CAGE_peak_1_at_Rapsn_5end | |description=CAGE_peak_1_at_Rapsn_5end | ||
|id=chr2:90875770..90875789,+ | |id=chr2:90875770..90875789,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!3.23e-13!23;UBERON:0001009!3.23e-13!23;UBERON:0007100!3.38e-12!18;UBERON:0000948!3.38e-12!18;UBERON:0005498!3.38e-12!18;UBERON:0004140!3.38e-12!18;UBERON:0009881!3.38e-12!18;UBERON:0004141!3.38e-12!18;UBERON:0003084!3.38e-12!18;UBERON:0007005!3.38e-12!18;UBERON:0004139!3.38e-12!18;UBERON:0004291!3.38e-12!18;UBERON:0004872!2.08e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.86e-18,23;UBERON:0001009,1.86e-18,23;UBERON:0007100,1.42e-17,18;UBERON:0000948,1.42e-17,18;UBERON:0005498,1.42e-17,18;UBERON:0004140,1.42e-17,18;UBERON:0009881,1.42e-17,18;UBERON:0004141,1.42e-17,18;UBERON:0003084,1.42e-17,18;UBERON:0007005,1.42e-17,18;UBERON:0004139,1.42e-17,18;UBERON:0004291,1.42e-17,18;UBERON:0004872,3.47e-12,33;UBERON:0003103,9.17e-08,43;UBERON:0003914,7.60e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,3.75094645512204,2.20256102594018,0,1.09012578190223,0.439372365468944,0.777719596297134,0,0,0,0,0,0,2.0057340795713,0.515672092277442,0,0,0,0,0,0.449949858640699,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12552522006336,0.15279824777681,0,0,0,0.37863096666592,0.0755715601067855,0.289864488701678,0,0,0,0,0,1.96622188184453,0,0,0.35333957451034,0,1.28326477414318,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0.173485326766136,0.913396434936424,0,0.301445281105245,0.352766121407114,1.13099932196708,0,0,0,5.17653919831709,3.75430581382669,0.969750506270444,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0,1.24406970610093,0,1.26265113531884,1.43132487258974,1.37941262660084,0.900310649026746,1.80845781402858,2.31324097114515,0.640568601424249,1.03071897015702,1.55222022443409,0,0.567318240503458,0.175951124163949,0.876782929710299,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0,0,1.65700618028402,1.17263029990548,2.34080679899319,2.13070262026689,4.52557733019029,4.9365476123961,5.34828072925938,5.36546802799238,6.53885917256149,5.43047504714485,3.61168420974009,2.99954595319666,4.23979963533464,3.73235195994786,3.08674763148855,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0.280543279561274,0.569128834118316,0.885660887877613,1.255989822731,1.35736880313981,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0.372140947668503,0,0,0.358794827043824,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0.478364305972461,0.327726629431476,0.172684981865896,0,0,0,0.491764273019036,0,0.160550589987792,0,0,8.07906967053994,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0,0,0.971122544619926,1.51161778482376,0.377210159511796,0.590603785761546,0,0.516856586336442,0,0.356497378384721,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0.65954501176592,0.484393280087717,0.422190474497091,0.238744688006273,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0.785267825952089,0,0,0,0,0,0,0.258319646955462,0.506868376472335,0.234714477291508,0,0,0,0.576060012515731,0,0.202725215290164,0.308132871494482,0,0,0,0.120195449519969,0,0,0,0,0,0,0,4.76133805591944,0,0,0.167884616364078,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.972426868273176,0.419226325255965,1.10306105070008,1.55572709461131,2.26638562962784,1.60459604795908,2.27427490587418,1.52087579934144,2.64076877940507,1.68554713445788,2.81710670581425,1.49332219284595,1.90517476513229,2.0859178670074,2.50781986602817,2.06042950401653,2.35518272215036,2.05721551431249,3.01708870470874,2.62279808942053,1.0174249164263,2.07040636913727,1.77690676572521,2.37806364734604,2.63069711437843,2.03706170768793,1.68342681497322,1.54225523561426,2.06859412988683,2.45538625901814,2.16911577660352,1.54325288784913,2.49810577937946,2.57324769289949,1.93383948643468,1.53030665655075,3.30887128679273,3.2461496986859 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,3.75094645512204,2.20256102594018,0,1.09012578190223,0.439372365468944,0.777719596297134,0,0,0,0,0,0,2.0057340795713,0.515672092277442,0,0,0,0,0,0.449949858640699,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12552522006336,0.15279824777681,0,0,0,0.37863096666592,0.0755715601067855,0.289864488701678,0,0,0,0,0,1.96622188184453,0,0,0.35333957451034,0,1.28326477414318,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0.173485326766136,0.913396434936424,0,0.301445281105245,0.352766121407114,1.13099932196708,0,0,0,5.17653919831709,3.75430581382669,0.969750506270444,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0,1.24406970610093,0,1.26265113531884,1.43132487258974,1.37941262660084,0.900310649026746,1.80845781402858,2.31324097114515,0.640568601424249,1.03071897015702,1.55222022443409,0,0.567318240503458,0.175951124163949,0.876782929710299,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0,0,1.65700618028402,1.17263029990548,2.34080679899319,2.13070262026689,4.52557733019029,4.9365476123961,5.34828072925938,5.36546802799238,6.53885917256149,5.43047504714485,3.61168420974009,2.99954595319666,4.23979963533464,3.73235195994786,3.08674763148855,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0.280543279561274,0.569128834118316,0.885660887877613,1.255989822731,1.35736880313981,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0.372140947668503,0,0,0.358794827043824,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0.478364305972461,0.327726629431476,0.172684981865896,0,0,0,0.491764273019036,0,0.160550589987792,0,0,8.07906967053994,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0,0,0.971122544619926,1.51161778482376,0.377210159511796,0.590603785761546,0,0.516856586336442,0,0.356497378384721,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0.65954501176592,0.484393280087717,0.422190474497091,0.238744688006273,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0.785267825952089,0,0,0,0,0,0,0.258319646955462,0.506868376472335,0.234714477291508,0,0,0,0.576060012515731,0,0.202725215290164,0.308132871494482,0,0,0,0.120195449519969,0,0,0,0,0,0,0,4.76133805591944,0,0,0.167884616364078,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.972426868273176,0.419226325255965,1.10306105070008,1.55572709461131,2.26638562962784,1.60459604795908,2.27427490587418,1.52087579934144,2.64076877940507,1.68554713445788,2.81710670581425,1.49332219284595,1.90517476513229,2.0859178670074,2.50781986602817,2.06042950401653,2.35518272215036,2.05721551431249,3.01708870470874,2.62279808942053,1.0174249164263,2.07040636913727,1.77690676572521,2.37806364734604,2.63069711437843,2.03706170768793,1.68342681497322,1.54225523561426,2.06859412988683,2.45538625901814,2.16911577660352,1.54325288784913,2.49810577937946,2.57324769289949,1.93383948643468,1.53030665655075,3.30887128679273,3.2461496986859 | ||
|short_description=p1@Rapsn | |short_description=p1@Rapsn | ||
}} | }} |
Latest revision as of 02:34, 27 September 2015
Short description: | p1@Rapsn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rapsn_5end |
Coexpression cluster: | MCL_coexpression_mm9:35 |
Association with transcript: | 0bp_to_ENSMUST00000111445, ENSMUST00000111446, NM_009023, uc008kud.2, uc012bzc.1_5end |
EntrezGene: | Rapsn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 1.86e-18 | 23 |
circulatory system | 1.86e-18 | 23 |
primary circulatory organ | 1.42e-17 | 18 |
heart | 1.42e-17 | 18 |
primitive heart tube | 1.42e-17 | 18 |
primary heart field | 1.42e-17 | 18 |
anterior lateral plate mesoderm | 1.42e-17 | 18 |
heart tube | 1.42e-17 | 18 |
heart primordium | 1.42e-17 | 18 |
cardiac mesoderm | 1.42e-17 | 18 |
cardiogenic plate | 1.42e-17 | 18 |
heart rudiment | 1.42e-17 | 18 |
splanchnic layer of lateral plate mesoderm | 3.47e-12 | 33 |
compound organ | 9.17e-08 | 43 |
epithelial tube | 7.60e-07 | 47 |