FFCP PHASE1:Mm9::chr4:101390059..101390067,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16847 | |EntrezGene=16847 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=A2AV66,P48356,Q3US58,Q640Q2,Q3UNU8,A2AV69 | |UniProt=A2AV66,P48356,Q3US58,Q640Q2,Q3UNU8,A2AV69 | ||
|association_with_transcript=47bp_to_ENSMUST00000145024,NM_001122899,NM_010704,NM_146146,uc008tvw.2,uc008tvx.2,uc008tvy.2,uc008tvz.2_5end | |association_with_transcript=47bp_to_ENSMUST00000145024,NM_001122899,NM_010704,NM_146146,uc008tvw.2,uc008tvx.2,uc008tvy.2,uc008tvz.2_5end | ||
|cluster_id=chr4:101390059..101390067,+ | |||
|description=CAGE_peak_8_at_Lepr_5end | |description=CAGE_peak_8_at_Lepr_5end | ||
|id=chr4:101390059..101390067,+ | |id=chr4:101390059..101390067,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000213,6.09e-07,1;CL:0002078,6.09e-07,1;CL:0000115,6.09e-07,1;CL:0002262,6.09e-07,1;CL:1000398,6.09e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000993,4.10e-07,1;UBERON:0002394,6.09e-07,1;UBERON:0001281,6.09e-07,1;UBERON:0000353,6.09e-07,1;UBERON:0003497,6.09e-07,1;UBERON:0003909,6.09e-07,1;UBERON:0003928,6.09e-07,1;UBERON:0003835,6.09e-07,1;UBERON:0003513,6.09e-07,1;UBERON:0001280,6.09e-07,1;UBERON:0004647,6.09e-07,1;UBERON:0002294,6.09e-07,1;UBERON:0001173,6.09e-07,1;UBERON:0004912,6.09e-07,1;UBERON:0005171,6.09e-07,1;UBERON:0000029,8.98e-07,1;UBERON:0001097,8.98e-07,1;UBERON:0003968,8.98e-07,1;UBERON:0001467,8.98e-07,1 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839918529752175,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0.220868540951614,0.122490799214954,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0.56276261003168,0.61119299110724,0.294628585473668,0,0,0,0,1.44932244350839,0,0,0,0,0.448026887097336,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0,1.29468941823586,0.445326417194474,0.173485326766136,0,0,0.150722640552623,0.470354828542819,0,0.247194967734374,0,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0,0.347648640384553,0.255715457330331,0,0,0.101839363850316,0.248813941220186,0,0.210441855886474,0.130120442962704,0,0.360124259610698,0.90422890701429,0.136072998302656,0,0.0937017245597288,1.03481348295606,0,0.189106080167819,0.351902248327898,0.43839146485515,0.834141747676794,1.39300866608867,0,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0,0,0.268273401399619,0,0,0,0.243206428637567,0.292399974850665,0,0,0.420579897128254,0.308713837137853,0,0,0,0,0,0,0.444756087689741,0.190225626112559,0,0.329397909448022,0.251335208800269,0,0.38992817423824,0,0.432276099749388,0.199141273254367,0.189667900953082,0,0,0,0,0,0.442655759869801,0.442830443938806,0,0.370191491765402,0,0,0.196558995113203,0,0,0,0.25462585178142,0,3.08056930872567,0.823684239564244,2.87536413054709,7.44281895337007,2.18426371180192,0.505157755894224,0.538192240565737,0,1.47802552133284,0.189491411770485,0.488894929326078,0.339490171550376,0,0.670025029767263,0,0.195133647857799,0.472905432318573,0,0.159454768657487,0.81931657357869,0.172684981865896,1.3018415272336,0,0,0,0,0.481651769963376,0.35163505977661,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0.178065603667255,0.162886959353576,2.3095817216155,0,0,0,0,0.295301892880773,0,0.516856586336442,0.727067458955011,0,0.316036757935816,1.05418608574999,0,0,0.36012218806262,0,0.214337035031592,1.24138163549592,0.891844088010353,0.658196082408484,0,0.469343416127421,0,0.220528398054962,0.16488625294148,0.807322133479528,0.241251699712623,0.119372344003136,0.328281799490123,0,0.556275906031529,0,0,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0.418176592028937,0.436725127492355,0.134864346384821,0.41326727862668,0,0.518459893167171,0,0,0.299033092087958,0,0.194451188344048,0.387479470433193,0.675824501963113,1.29092962510329,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.579568782096571,1.12609485270709,0.73260649706906,0,0,0,0,0,0.859265911718438,0.685082519770642,0,0.675022500231806,0.45032120322422,0,0,0.103787347584177,0.399024873401031,0.512200817262403,0.243106717068294,0.209613162627982,0,0.666740183404846,0.412070114477788,0,0,0.760437899670719,0.377252682772152,0.37456602987953,0.192075457214608,0.0574354689556133,0,0.347652977834566,0.192909220463705,0,0.294397840268795,0,0.70990322463735,0.238436189947321,0.145346416632329,0.282328141245992,0.169229215783353,0,0.263069711437843,0.271608227691724,1.12228454331548,0.237270036248348,0.29551344712669,0.409231043169689,0.154936841185966,0.192906610981141,0.749431733813838,0.467863216890817,0.644613162144895,0.57386499620653,0.441182838239031,0.231867835620421 | |phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839918529752175,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0.220868540951614,0.122490799214954,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0.56276261003168,0.61119299110724,0.294628585473668,0,0,0,0,1.44932244350839,0,0,0,0,0.448026887097336,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0,1.29468941823586,0.445326417194474,0.173485326766136,0,0,0.150722640552623,0.470354828542819,0,0.247194967734374,0,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0,0.347648640384553,0.255715457330331,0,0,0.101839363850316,0.248813941220186,0,0.210441855886474,0.130120442962704,0,0.360124259610698,0.90422890701429,0.136072998302656,0,0.0937017245597288,1.03481348295606,0,0.189106080167819,0.351902248327898,0.43839146485515,0.834141747676794,1.39300866608867,0,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0,0,0.268273401399619,0,0,0,0.243206428637567,0.292399974850665,0,0,0.420579897128254,0.308713837137853,0,0,0,0,0,0,0.444756087689741,0.190225626112559,0,0.329397909448022,0.251335208800269,0,0.38992817423824,0,0.432276099749388,0.199141273254367,0.189667900953082,0,0,0,0,0,0.442655759869801,0.442830443938806,0,0.370191491765402,0,0,0.196558995113203,0,0,0,0.25462585178142,0,3.08056930872567,0.823684239564244,2.87536413054709,7.44281895337007,2.18426371180192,0.505157755894224,0.538192240565737,0,1.47802552133284,0.189491411770485,0.488894929326078,0.339490171550376,0,0.670025029767263,0,0.195133647857799,0.472905432318573,0,0.159454768657487,0.81931657357869,0.172684981865896,1.3018415272336,0,0,0,0,0.481651769963376,0.35163505977661,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0.178065603667255,0.162886959353576,2.3095817216155,0,0,0,0,0.295301892880773,0,0.516856586336442,0.727067458955011,0,0.316036757935816,1.05418608574999,0,0,0.36012218806262,0,0.214337035031592,1.24138163549592,0.891844088010353,0.658196082408484,0,0.469343416127421,0,0.220528398054962,0.16488625294148,0.807322133479528,0.241251699712623,0.119372344003136,0.328281799490123,0,0.556275906031529,0,0,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0.418176592028937,0.436725127492355,0.134864346384821,0.41326727862668,0,0.518459893167171,0,0,0.299033092087958,0,0.194451188344048,0.387479470433193,0.675824501963113,1.29092962510329,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.579568782096571,1.12609485270709,0.73260649706906,0,0,0,0,0,0.859265911718438,0.685082519770642,0,0.675022500231806,0.45032120322422,0,0,0.103787347584177,0.399024873401031,0.512200817262403,0.243106717068294,0.209613162627982,0,0.666740183404846,0.412070114477788,0,0,0.760437899670719,0.377252682772152,0.37456602987953,0.192075457214608,0.0574354689556133,0,0.347652977834566,0.192909220463705,0,0.294397840268795,0,0.70990322463735,0.238436189947321,0.145346416632329,0.282328141245992,0.169229215783353,0,0.263069711437843,0.271608227691724,1.12228454331548,0.237270036248348,0.29551344712669,0.409231043169689,0.154936841185966,0.192906610981141,0.749431733813838,0.467863216890817,0.644613162144895,0.57386499620653,0.441182838239031,0.231867835620421 | ||
|short_description=p8@Lepr | |short_description=p8@Lepr | ||
}} | }} |
Latest revision as of 01:40, 26 September 2015
Short description: | p8@Lepr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Lepr_5end |
Coexpression cluster: | NA |
Association with transcript: | 47bp_to_ENSMUST00000145024, NM_001122899, NM_010704, NM_146146, uc008tvw.2, uc008tvx.2, uc008tvy.2, uc008tvz.2_5end |
EntrezGene: | Lepr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 6.09e-07 | 1 |
meso-epithelial cell | 6.09e-07 | 1 |
endothelial cell | 6.09e-07 | 1 |
endothelial cell of sinusoid | 6.09e-07 | 1 |
endothelial cell of hepatic sinusoid | 6.09e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
oviduct | 4.10e-07 | 1 |
bile duct | 6.09e-07 | 1 |
hepatic sinusoid | 6.09e-07 | 1 |
parenchyma | 6.09e-07 | 1 |
abdomen blood vessel | 6.09e-07 | 1 |
sinusoid | 6.09e-07 | 1 |
digestive system duct | 6.09e-07 | 1 |
abdominal segment blood vessel | 6.09e-07 | 1 |
trunk blood vessel | 6.09e-07 | 1 |
liver parenchyma | 6.09e-07 | 1 |
liver lobule | 6.09e-07 | 1 |
biliary system | 6.09e-07 | 1 |
biliary tree | 6.09e-07 | 1 |
biliary bud | 6.09e-07 | 1 |
hepatic duct | 6.09e-07 | 1 |
lymph node | 8.98e-07 | 1 |
axillary lymph node | 8.98e-07 | 1 |
peripheral lymph node | 8.98e-07 | 1 |
shoulder | 8.98e-07 | 1 |