FFCP PHASE1:Mm9::chr6:39507797..39507826,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=209773 | |EntrezGene=209773 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2444 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C4S8,B7ZP28,D3Z1C6 | |UniProt=Q8C4S8,B7ZP28,D3Z1C6 | ||
|association_with_transcript=6bp_to_NM_172477,uc009blx.1,uc009bly.1,uc009blz.1_5end | |association_with_transcript=6bp_to_NM_172477,uc009blx.1,uc009bly.1,uc009blz.1_5end | ||
|cluster_id=chr6:39507797..39507826,- | |||
|description=CAGE_peak_4_at_Dennd2a_5end | |description=CAGE_peak_4_at_Dennd2a_5end | ||
|id=chr6:39507797..39507826,- | |id=chr6:39507797..39507826,- | ||
|ontology_enrichment_celltype=CL:0000221!2.69e-12!44;CL:0000133!2.69e-12!44;CL:0002319!7.19e-12!43;CL:0000055!1.83e-11!50;CL:0000393!2.50e-07!39;CL:0000211!2.50e-07!39;CL:0000540!2.70e-07!33;CL:0000047!2.70e-07!33;CL:0000031!2.70e-07!33;CL:0000404!2.70e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,5.20e-13,44;CL:0000133,5.20e-13,44;CL:0002319,1.52e-12,43;CL:0000540,1.40e-07,33;CL:0000047,1.40e-07,33;CL:0000031,1.40e-07,33;CL:0000404,1.40e-07,33;CL:0000393,1.64e-07,39;CL:0000211,1.64e-07,39;CL:0000333,8.93e-07,10;CL:0000095,8.93e-07,10;CL:0000243,8.93e-07,10;CL:0000123,8.93e-07,10;CL:0000125,8.93e-07,10;CL:0000030,8.93e-07,10;CL:0000339,8.93e-07,10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.63e-11!75;UBERON:0001016!3.63e-11!75;UBERON:0004121!1.02e-10!102;UBERON:0000924!1.02e-10!102;UBERON:0006601!1.02e-10!102;UBERON:0001017!4.04e-10!73;UBERON:0005743!4.04e-10!73;UBERON:0000468!4.22e-08!333;UBERON:0000010!4.72e-07!11;UBERON:0000922!5.81e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.12e-10,95;UBERON:0000924,1.12e-10,95;UBERON:0006601,1.12e-10,95;UBERON:0001016,1.48e-10,75;UBERON:0001017,1.76e-09,73;UBERON:0000010,1.39e-07,11 | |||
|phase1_expression=4.16387002472464,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,0.523523743973798,0,1.36609096991689,0.971020706062307,1.00717454380462,1.11514624341466,1.10128051297009,1.56478268869608,3.48840250208714,8.12838876117546,3.4997381833371,3.21968769738334,5.75010257459886,0,0,0,3.8588915405392,3.72493471920384,0.515672092277442,3.84401275633236,1.05798195854407,3.80298842103708,1.35537812827653,2.66788438833342,1.7997994345628,0.988866362566974,1.4209602298922,2.69640099466564,6.14749288514487,1.97010263386108,1.35005938331691,1.47227472945967,2.28520787523043,1.98781686856452,0.857435594504678,2.39613677545591,2.75765635983006,0,2.80912143787413,2.61131106535614,1.45074916503213,2.47016637726506,2.08365348222704,0.279182999001381,0.56276261003168,2.90316670775939,1.47314292736834,2.56269025438385,3.54158947068071,5.52801211332244,7.93501381121248,0.869593466105033,0.860423876981386,0,0,0,0,0.421333260395256,0,0,0,3.09855523508697,0,0,0,0,0,0,0.34255163915718,0,0.593768556259299,1.38788261412909,0.913396434936424,0.922461989024234,0.753613202763113,1.17588707135705,0.251333182659351,0.988779870937496,0.433798070759735,0,2.42650274921114,0.441683036920787,0.484875253135222,0,0,1.25668024088073,0,0.239630249011841,0,0.508280908292259,1.9472783122627,0.457500602818626,0.879580464790051,0.695297280769106,0.767146371990992,0.83115217823824,2.27137768294861,4.07357455401265,0.124406970610093,0.252722758433675,0.841767423545896,2.08192708740326,3.21862946206862,3.96136685571768,4.37043971723574,2.72145996605311,2.0498195245576,4.2165776051878,1.81092359517311,1.29340795759705,1.32374256117473,2.46331573829528,3.28793598641362,3.05851974148158,3.1342694986995,1.64625709126355,2.9855140022774,0,0,0.284163499395593,2.07125772535502,1.17263029990548,1.08037236876609,2.84093682702252,1.18058539048442,2.00547246753592,0.930135779001631,1.60964040839772,1.98501082024188,2.63295759861569,1.97000956894914,1.4592385718254,2.04679982395465,0.878200461164203,0.536825675041487,1.26173969138476,2.57261530948211,0,0,3.41261200856374,1.39342003116263,1.28867461322093,1.21010114774006,0.889512175379481,1.33157938278791,1.42358718463353,0.658795818896044,0.502670417600539,0.994782360205754,1.75467678407208,0.898819408654221,0.216138049874694,0.199141273254367,1.51734320762465,2.74196430263349,3.38123207019241,2.24016460629846,0.581857461502877,2.24434623649019,1.3279672796094,0.590440591918409,0.470996183524124,0.370191491765402,0.889357881261447,1.00107063429656,0.589676985339609,0.224862112384854,0.811440485554012,0,1.2731292589071,1.43848068725405,0.162135226775035,0.274561413188081,1.43768206527355,1.86070473834252,0,0.757736633841335,0.358794827043824,0,0.923765950833023,1.89491411770485,2.77040459951444,1.01847051465113,2.34690248288502,2.1775813467436,2.85652369063216,4.68320754858717,3.78324345854858,5.53661724121937,4.78364305972461,1.80249646187312,0.690739927463582,1.59113964439663,1.50791283939272,0.54390568381871,0,1.37968373152366,0.481651769963376,1.28932855251423,2.78689407140348,1.00988370881749,2.83957397474631,2.73307121007647,3.66219776145758,5.9742199488138,5.56996685205985,7.92614286208731,3.64329631507405,2.63030272120181,2.76701444562566,2.57057053137446,2.12910127812403,3.73937767701236,3.90928702448583,3.29940245945071,0,3.64170954232472,3.02323556964751,0.943025398779491,0.885905678642318,3.68922177532713,1.29214146584111,1.09060118843252,1.78248689192361,0.316036757935816,0,0,2.04263763452273,1.98067203434441,3.62204314591713,4.07240366560025,4.43350584105684,2.14042581122485,4.44282355625727,4.87143918583359,1.87737366450968,5.50763384245932,0.220528398054962,0.8244312647074,2.58343082713449,1.20625849856312,0.716234064018819,0.164140899745061,0.291480836629851,0.556275906031529,0.341741761595705,3.30218988741156,0.925972636848558,0.376736914009382,0.410082683163076,0.686334519619568,0.169978429993855,0.419854356970974,0.138199973804424,0,2.37251995185852,2.23651413839534,1.51207477150522,1.67270636811575,1.31017538247707,0.674321731924103,0.991841468704031,0.523511883968059,0.648074866458964,0,0,1.94371509857172,2.97825282822776,2.52786544847262,2.71235629303235,3.21016638432478,2.22978753426933,2.47388331203505,1.04859344425711,0.241584120826006,0.288030006257865,0.316011120628178,0.608175645870493,1.02710957164827,0.389762468933385,0.537080087002444,0.596044064343795,0.480781798079875,0,0,0.0762068066549998,0,0,0,0,0.680191150845634,1.55390167361845,1.52513556236109,2.68615386182526,0.386379188064381,2.43987218086537,3.84618410961257,0.214368379079066,0,2.25900737046827,0.920650473014354,0.572895513439397,1.03111909406213,1.37016503954128,0.755393897389701,1.35004500046361,1.35096360967266,0,1.55328093525546,2.28332164685189,3.19219898720825,1.02440163452481,2.91728060481953,1.04806581313991,2.38996560985018,1.77797382241292,1.23621034343337,1.92551525755089,1.01078884705519,2.02783439912192,2.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| |phase1_expression=4.16387002472464,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,0.523523743973798,0,1.36609096991689,0.971020706062307,1.00717454380462,1.11514624341466,1.10128051297009,1.56478268869608,3.48840250208714,8.12838876117546,3.4997381833371,3.21968769738334,5.75010257459886,0,0,0,3.8588915405392,3.72493471920384,0.515672092277442,3.84401275633236,1.05798195854407,3.80298842103708,1.35537812827653,2.66788438833342,1.7997994345628,0.988866362566974,1.4209602298922,2.69640099466564,6.14749288514487,1.97010263386108,1.35005938331691,1.47227472945967,2.28520787523043,1.98781686856452,0.857435594504678,2.39613677545591,2.75765635983006,0,2.80912143787413,2.61131106535614,1.45074916503213,2.47016637726506,2.08365348222704,0.279182999001381,0.56276261003168,2.90316670775939,1.47314292736834,2.56269025438385,3.54158947068071,5.52801211332244,7.93501381121248,0.869593466105033,0.860423876981386,0,0,0,0,0.421333260395256,0,0,0,3.09855523508697,0,0,0,0,0,0,0.34255163915718,0,0.593768556259299,1.38788261412909,0.913396434936424,0.922461989024234,0.753613202763113,1.17588707135705,0.251333182659351,0.988779870937496,0.433798070759735,0,2.42650274921114,0.441683036920787,0.484875253135222,0,0,1.25668024088073,0,0.239630249011841,0,0.508280908292259,1.9472783122627,0.457500602818626,0.879580464790051,0.695297280769106,0.767146371990992,0.83115217823824,2.27137768294861,4.07357455401265,0.124406970610093,0.252722758433675,0.841767423545896,2.08192708740326,3.21862946206862,3.96136685571768,4.37043971723574,2.72145996605311,2.0498195245576,4.2165776051878,1.81092359517311,1.29340795759705,1.32374256117473,2.46331573829528,3.28793598641362,3.05851974148158,3.1342694986995,1.64625709126355,2.9855140022774,0,0,0.284163499395593,2.07125772535502,1.17263029990548,1.08037236876609,2.84093682702252,1.18058539048442,2.00547246753592,0.930135779001631,1.60964040839772,1.98501082024188,2.63295759861569,1.97000956894914,1.4592385718254,2.04679982395465,0.878200461164203,0.536825675041487,1.26173969138476,2.57261530948211,0,0,3.41261200856374,1.39342003116263,1.28867461322093,1.21010114774006,0.889512175379481,1.33157938278791,1.42358718463353,0.658795818896044,0.502670417600539,0.994782360205754,1.75467678407208,0.898819408654221,0.216138049874694,0.199141273254367,1.51734320762465,2.74196430263349,3.38123207019241,2.24016460629846,0.581857461502877,2.24434623649019,1.3279672796094,0.590440591918409,0.470996183524124,0.370191491765402,0.889357881261447,1.00107063429656,0.589676985339609,0.224862112384854,0.811440485554012,0,1.2731292589071,1.43848068725405,0.162135226775035,0.274561413188081,1.43768206527355,1.86070473834252,0,0.757736633841335,0.358794827043824,0,0.923765950833023,1.89491411770485,2.77040459951444,1.01847051465113,2.34690248288502,2.1775813467436,2.85652369063216,4.68320754858717,3.78324345854858,5.53661724121937,4.78364305972461,1.80249646187312,0.690739927463582,1.59113964439663,1.50791283939272,0.54390568381871,0,1.37968373152366,0.481651769963376,1.28932855251423,2.78689407140348,1.00988370881749,2.83957397474631,2.73307121007647,3.66219776145758,5.9742199488138,5.56996685205985,7.92614286208731,3.64329631507405,2.63030272120181,2.76701444562566,2.57057053137446,2.12910127812403,3.73937767701236,3.90928702448583,3.29940245945071,0,3.64170954232472,3.02323556964751,0.943025398779491,0.885905678642318,3.68922177532713,1.29214146584111,1.09060118843252,1.78248689192361,0.316036757935816,0,0,2.04263763452273,1.98067203434441,3.62204314591713,4.07240366560025,4.43350584105684,2.14042581122485,4.44282355625727,4.87143918583359,1.87737366450968,5.50763384245932,0.220528398054962,0.8244312647074,2.58343082713449,1.20625849856312,0.716234064018819,0.164140899745061,0.291480836629851,0.556275906031529,0.341741761595705,3.30218988741156,0.925972636848558,0.376736914009382,0.410082683163076,0.686334519619568,0.169978429993855,0.419854356970974,0.138199973804424,0,2.37251995185852,2.23651413839534,1.51207477150522,1.67270636811575,1.31017538247707,0.674321731924103,0.991841468704031,0.523511883968059,0.648074866458964,0,0,1.94371509857172,2.97825282822776,2.52786544847262,2.71235629303235,3.21016638432478,2.22978753426933,2.47388331203505,1.04859344425711,0.241584120826006,0.288030006257865,0.316011120628178,0.608175645870493,1.02710957164827,0.389762468933385,0.537080087002444,0.596044064343795,0.480781798079875,0,0,0.0762068066549998,0,0,0,0,0.680191150845634,1.55390167361845,1.52513556236109,2.68615386182526,0.386379188064381,2.43987218086537,3.84618410961257,0.214368379079066,0,2.25900737046827,0.920650473014354,0.572895513439397,1.03111909406213,1.37016503954128,0.755393897389701,1.35004500046361,1.35096360967266,0,1.55328093525546,2.28332164685189,3.19219898720825,1.02440163452481,2.91728060481953,1.04806581313991,2.38996560985018,1.77797382241292,1.23621034343337,1.92551525755089,1.01078884705519,2.02783439912192,2.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| ||
|short_description=p4@Dennd2a | |short_description=p4@Dennd2a | ||
}} | }} |
Latest revision as of 04:02, 27 September 2015
Short description: | p4@Dennd2a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Dennd2a_5end |
Coexpression cluster: | MCL_coexpression_mm9:2444 |
Association with transcript: | 6bp_to_NM_172477, uc009blx.1, uc009bly.1, uc009blz.1_5end |
EntrezGene: | Dennd2a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 5.20e-13 | 44 |
neurectodermal cell | 5.20e-13 | 44 |
neural cell | 1.52e-12 | 43 |
neuron | 1.40e-07 | 33 |
neuronal stem cell | 1.40e-07 | 33 |
neuroblast | 1.40e-07 | 33 |
electrically signaling cell | 1.40e-07 | 33 |
electrically responsive cell | 1.64e-07 | 39 |
electrically active cell | 1.64e-07 | 39 |
migratory neural crest cell | 8.93e-07 | 10 |
neuron associated cell | 8.93e-07 | 10 |
glial cell (sensu Vertebrata) | 8.93e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 8.93e-07 | 10 |
glial cell | 8.93e-07 | 10 |
glioblast | 8.93e-07 | 10 |
glioblast (sensu Vertebrata) | 8.93e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.12e-10 | 95 |
ectoderm | 1.12e-10 | 95 |
presumptive ectoderm | 1.12e-10 | 95 |
nervous system | 1.48e-10 | 75 |
central nervous system | 1.76e-09 | 73 |
peripheral nervous system | 1.39e-07 | 11 |