FFCP PHASE1:Mm9::chr4:140366561..140366564,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18601 | |EntrezGene=18601 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=25 | |||
|TSSclassifier=NA | |||
|UniProt=Q9Z184,Q5DTJ8 | |UniProt=Q9Z184,Q5DTJ8 | ||
|association_with_transcript=0bp_to_ENSMUST00000026377,NM_011060,uc008vng.1_5end | |association_with_transcript=0bp_to_ENSMUST00000026377,NM_011060,uc008vng.1_5end | ||
|cluster_id=chr4:140366561..140366564,- | |||
|description=CAGE_peak_1_at_Padi3_5end | |description=CAGE_peak_1_at_Padi3_5end | ||
|id=chr4:140366561..140366564,- | |id=chr4:140366561..140366564,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,4.36e-11,3;CL:0002202,4.36e-11,3;CL:0000069,4.36e-11,3;CL:0002632,4.36e-11,3;CL:0002368,4.36e-11,3;CL:0000307,4.36e-11,3;CL:0000377,4.36e-11,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!1.32e-07!14;UBERON:0003101!1.92e-07!16;UBERON:0000079!1.92e-07!16;UBERON:0000991!4.04e-07!18;UBERON:0005564!4.04e-07!18;UBERON:0003135!7.84e-07!15;UBERON:0004176!8.40e-07!17;UBERON:0009196!8.40e-07!17;UBERON:0009117!8.40e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,1.66e-18,5;UBERON:0001003,1.66e-18,5;UBERON:0002097,1.66e-18,5;UBERON:0002199,1.66e-18,5;UBERON:0007029,1.66e-18,5;UBERON:0007376,1.66e-18,5;UBERON:0002416,1.66e-18,5;UBERON:0007383,1.66e-18,5;UBERON:0000473,3.05e-17,14;UBERON:0003135,5.35e-16,15;UBERON:0003101,6.55e-15,16;UBERON:0000079,6.55e-15,16;UBERON:0004176,5.98e-14,17;UBERON:0009196,5.98e-14,17;UBERON:0009117,5.98e-14,17;UBERON:0000991,4.27e-13,18;UBERON:0005564,4.27e-13,18;UBERON:0003133,1.16e-11,24;UBERON:0003126,4.36e-11,3;UBERON:0001005,4.36e-11,3;UBERON:0007196,4.36e-11,3;UBERON:0001558,4.36e-11,3;UBERON:0005156,1.23e-10,26;UBERON:0000990,1.23e-10,26;UBERON:0002323,5.19e-07,37;UBERON:0004458,5.19e-07,37;UBERON:0003886,8.77e-07,38 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0.17008658030214,0.397163804803541,0,0,0,0,0,0,0,0,0,5.71527606113668,9.84103660135312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,6.27824018932521,4.05375784760158,3.0331466700887,0.11418387971906,0.258937883647172,0,0,0,0,0.301445281105245,0.117588707135705,0,0,0,0,0.161766849947409,0.441683036920787,0.969750506270444,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0.130120442962704,0,0,0.30140963567143,0,0.12811372028485,0,0,0.431135985865684,0,0.351902248327898,0.876782929710299,0,0,0,0.199034266818493,0,0,0,0.621377317606506,0.938104239924385,0.900310307305074,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,0,0,0.329119699826961,0,0.0810688095458557,0.438599962275997,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0.380451252225118,0,0,0.502670417600539,0.198956472041151,0,0,0,0,0,0.228497025219458,0,0,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0.196558995113203,0.449724224769707,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0.661585194164886,120.861623406105,7.42736362801165,57.1163399069636,191.711984469037,326.312108693182,0,0,0.170870880797853,0.82554747185289,1.48155621895769,0,0,0.228778173206523,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0.598066184175915,1.32366792365678,2.72231663681667,1.93739735216597,2.19642963138012,1.29092962510329,1.5624526181274,3.25063967719704,1.93267296660805,1.15212002503146,0,0.405450430580328,0.102710957164827,0.649604114888975,0.537080087002444,0.79472541912506,0.721172697119813,0.738447635872886,0.504832249740738,0.533447646584999,0.604957110821043,0.682205165178267,1.05833025804362,1.28564592399726,0,0.221985953374065,0,0,0.579568782096571,0,0.549454872801795,1.2862102744744,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0.170733605754134,0.729320151204882,0.209613162627982,0.183843508450014,0,0,0.320919209591815,0.505394423527595,0.50695859978048,0.188626341386076,0.0936415074698824,0,0.0574354689556133,0,0.695305955669133,0.192909220463705,0,0,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.470546902076653,0.25384382367503,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.818462086339379,0.309873682371932,0.192906610981141,2.49810577937946,0.467863216890817,2.36358159453128,0.382576664137687,17.2061306913222,1.39120701372253 | |phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0.17008658030214,0.397163804803541,0,0,0,0,0,0,0,0,0,5.71527606113668,9.84103660135312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,6.27824018932521,4.05375784760158,3.0331466700887,0.11418387971906,0.258937883647172,0,0,0,0,0.301445281105245,0.117588707135705,0,0,0,0,0.161766849947409,0.441683036920787,0.969750506270444,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0.130120442962704,0,0,0.30140963567143,0,0.12811372028485,0,0,0.431135985865684,0,0.351902248327898,0.876782929710299,0,0,0,0.199034266818493,0,0,0,0.621377317606506,0.938104239924385,0.900310307305074,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,0,0,0.329119699826961,0,0.0810688095458557,0.438599962275997,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0.380451252225118,0,0,0.502670417600539,0.198956472041151,0,0,0,0,0,0.228497025219458,0,0,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0.196558995113203,0.449724224769707,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0.661585194164886,120.861623406105,7.42736362801165,57.1163399069636,191.711984469037,326.312108693182,0,0,0.170870880797853,0.82554747185289,1.48155621895769,0,0,0.228778173206523,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0.598066184175915,1.32366792365678,2.72231663681667,1.93739735216597,2.19642963138012,1.29092962510329,1.5624526181274,3.25063967719704,1.93267296660805,1.15212002503146,0,0.405450430580328,0.102710957164827,0.649604114888975,0.537080087002444,0.79472541912506,0.721172697119813,0.738447635872886,0.504832249740738,0.533447646584999,0.604957110821043,0.682205165178267,1.05833025804362,1.28564592399726,0,0.221985953374065,0,0,0.579568782096571,0,0.549454872801795,1.2862102744744,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0.170733605754134,0.729320151204882,0.209613162627982,0.183843508450014,0,0,0.320919209591815,0.505394423527595,0.50695859978048,0.188626341386076,0.0936415074698824,0,0.0574354689556133,0,0.695305955669133,0.192909220463705,0,0,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.470546902076653,0.25384382367503,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.818462086339379,0.309873682371932,0.192906610981141,2.49810577937946,0.467863216890817,2.36358159453128,0.382576664137687,17.2061306913222,1.39120701372253 | ||
|short_description=p1@Padi3 | |short_description=p1@Padi3 | ||
}} | }} |
Latest revision as of 15:06, 26 September 2015
Short description: | p1@Padi3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Padi3_5end |
Coexpression cluster: | MCL_coexpression_mm9:25 |
Association with transcript: | 0bp_to_ENSMUST00000026377, NM_011060, uc008vng.1_5end |
EntrezGene: | Padi3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 4.36e-11 | 3 |
epithelial cell of tracheobronchial tree | 4.36e-11 | 3 |
branched duct epithelial cell | 4.36e-11 | 3 |
epithelial cell of lower respiratory tract | 4.36e-11 | 3 |
respiratory epithelial cell | 4.36e-11 | 3 |
tracheal epithelial cell | 4.36e-11 | 3 |
tracheoblast | 4.36e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 1.66e-18 | 5 |
skin epidermis | 1.66e-18 | 5 |
skin of body | 1.66e-18 | 5 |
integument | 1.66e-18 | 5 |
surface | 1.66e-18 | 5 |
outer epithelium | 1.66e-18 | 5 |
integumental system | 1.66e-18 | 5 |
enveloping layer of ectoderm | 1.66e-18 | 5 |
testis | 3.05e-17 | 14 |
male reproductive organ | 5.35e-16 | 15 |
male organism | 6.55e-15 | 16 |
male reproductive system | 6.55e-15 | 16 |
external genitalia | 5.98e-14 | 17 |
indifferent external genitalia | 5.98e-14 | 17 |
indifferent gonad | 5.98e-14 | 17 |
gonad | 4.27e-13 | 18 |
gonad primordium | 4.27e-13 | 18 |
reproductive organ | 1.16e-11 | 24 |
trachea | 4.36e-11 | 3 |
respiratory airway | 4.36e-11 | 3 |
tracheobronchial tree | 4.36e-11 | 3 |
lower respiratory tract | 4.36e-11 | 3 |
reproductive structure | 1.23e-10 | 26 |
reproductive system | 1.23e-10 | 26 |
body cavity | 5.19e-07 | 37 |
body cavity or lining | 5.19e-07 | 37 |
body cavity precursor | 8.77e-07 | 38 |