FFCP PHASE1:Mm9::chr15:58341592..58341608,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=631797 | |EntrezGene=631797 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=274 | |||
|TSSclassifier=NA | |||
|UniProt=E0CZ42 | |UniProt=E0CZ42 | ||
|association_with_transcript=0bp_to_ENSMUST00000161028_5end | |association_with_transcript=0bp_to_ENSMUST00000161028_5end | ||
|cluster_id=chr15:58341592..58341608,+ | |||
|description=CAGE_peak_1_at_Fer1l6_5end | |description=CAGE_peak_1_at_Fer1l6_5end | ||
|id=chr15:58341592..58341608,+ | |id=chr15:58341592..58341608,+ | ||
|ontology_enrichment_celltype=CL:0002563!2.53e-07!9;CL:0002251!2.53e-07!9;CL:0000239!2.56e-07!6;CL:0000677!2.56e-07!6;CL:0000212!2.56e-07!6;CL:0000584!2.56e-07!6 | |ontology_enrichment_celltype=CL:0002563!2.53e-07!9;CL:0002251!2.53e-07!9;CL:0000239!2.56e-07!6;CL:0000677!2.56e-07!6;CL:0000212!2.56e-07!6;CL:0000584!2.56e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.53e-13,6;CL:0000677,1.53e-13,6;CL:0000584,1.53e-13,6;CL:0000075,1.65e-11,7;CL:0002563,8.50e-09,9;CL:0002251,8.50e-09,9;CL:0000682,5.30e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.78e-18!59;UBERON:0000160!8.29e-17!43;UBERON:0000344!1.13e-13!15;UBERON:0001007!3.94e-13!128;UBERON:0001555!3.94e-13!128;UBERON:0007026!3.94e-13!128;UBERON:0004119!1.16e-12!130;UBERON:0000925!1.16e-12!130;UBERON:0006595!1.16e-12!130;UBERON:0004921!8.70e-12!126;UBERON:0004185!8.70e-12!126;UBERON:0001242!1.54e-11!13;UBERON:0000060!1.54e-11!13;UBERON:0001262!1.54e-11!13;UBERON:0004786!1.54e-11!13;UBERON:0003350!2.53e-07!9;UBERON:0004808!2.53e-07!9;UBERON:0001277!2.53e-07!9;UBERON:0004923!8.00e-07!24 | |ontology_enrichment_uberon=UBERON:0005409!1.78e-18!59;UBERON:0000160!8.29e-17!43;UBERON:0000344!1.13e-13!15;UBERON:0001007!3.94e-13!128;UBERON:0001555!3.94e-13!128;UBERON:0007026!3.94e-13!128;UBERON:0004119!1.16e-12!130;UBERON:0000925!1.16e-12!130;UBERON:0006595!1.16e-12!130;UBERON:0004921!8.70e-12!126;UBERON:0004185!8.70e-12!126;UBERON:0001242!1.54e-11!13;UBERON:0000060!1.54e-11!13;UBERON:0001262!1.54e-11!13;UBERON:0004786!1.54e-11!13;UBERON:0003350!2.53e-07!9;UBERON:0004808!2.53e-07!9;UBERON:0001277!2.53e-07!9;UBERON:0004923!8.00e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.66e-43,31;UBERON:0005409,2.83e-29,47;UBERON:0000344,4.16e-21,15;UBERON:0001242,7.23e-17,13;UBERON:0001262,7.23e-17,13;UBERON:0004786,7.23e-17,13;UBERON:0001007,1.92e-14,116;UBERON:0001555,1.92e-14,116;UBERON:0007026,1.92e-14,116;UBERON:0004119,4.46e-14,118;UBERON:0000925,4.46e-14,118;UBERON:0006595,4.46e-14,118;UBERON:0004921,2.44e-12,114;UBERON:0004923,3.55e-12,24;UBERON:0002108,2.89e-10,4;UBERON:0003350,8.50e-09,9;UBERON:0004808,8.50e-09,9;UBERON:0001277,8.50e-09,9;UBERON:0000331,3.61e-08,3;UBERON:0002116,3.61e-08,3;UBERON:0001204,3.61e-08,3;UBERON:0001168,3.61e-08,3;UBERON:0000485,4.52e-07,11 | |||
|phase1_expression=0,2.09385244583617,2.27499619694768,4.23449895829562,1.50268718983904,74.0347589131434,70.0837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.1189998087297,18.5821517664408,5.16808767703518,18.9535278309993,20.6852383378453,32.1139578881272,18.3981994724749,13.082100128663,0,0,0,0.288851619751275,0,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,4.5673551887624,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0.220841518460394,0,72.6927868750676,0,0,21.9693067479389,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,48.2411423156345,16.6603856998033,0,0,0.515469845288373,2.62188582010345,1.11189021922435,3.99473814836374,18.0321043386914,7.5761519173045,11.0587491872119,10.9426059622633,9.16331209459865,18.8752075817387,30.4754650323319,35.248005366023,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0.390267295715598,0.630540576424764,0.664394068946325,3.82691444777969,2.13022309130459,2.76295970985433,1.59113964439663,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80899805217755,0,0,0,0,0,0,0,0,0,0,0.713475270408282,0.164549020602121,1.8267896946876,0,0,0,0.16488625294148,0,0,0.119372344003136,0.164140899745061,17.1973693611612,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.648032044930808,0.209088296014469,0.87345025498471,0.134864346384821,0.0826534557253359,0.26175594198403,29.8114438571124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0.39736270956253,0.120195449519969,0.147689527174577,0.605798699688886,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.377252682772152,0.468207537349412,0.448176066834085,0.17230640686684,0.476293691283074,0.115884325944855,0.192909220463705,0,0,0,0.354951612318675,0.238436189947321,0.290692833264657,0.0941093804153306,0.0846146078916765,0.182927972872773,0.526139422875686,0,0,0,0.197008964751127,0.818462086339379,0.154936841185966,0,0,0.701794825336225,0.214871054048298,0.191288332068843,0,0.463735671240843 | |phase1_expression=0,2.09385244583617,2.27499619694768,4.23449895829562,1.50268718983904,74.0347589131434,70.0837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.1189998087297,18.5821517664408,5.16808767703518,18.9535278309993,20.6852383378453,32.1139578881272,18.3981994724749,13.082100128663,0,0,0,0.288851619751275,0,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,4.5673551887624,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0.220841518460394,0,72.6927868750676,0,0,21.9693067479389,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,48.2411423156345,16.6603856998033,0,0,0.515469845288373,2.62188582010345,1.11189021922435,3.99473814836374,18.0321043386914,7.5761519173045,11.0587491872119,10.9426059622633,9.16331209459865,18.8752075817387,30.4754650323319,35.248005366023,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0.390267295715598,0.630540576424764,0.664394068946325,3.82691444777969,2.13022309130459,2.76295970985433,1.59113964439663,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80899805217755,0,0,0,0,0,0,0,0,0,0,0.713475270408282,0.164549020602121,1.8267896946876,0,0,0,0.16488625294148,0,0,0.119372344003136,0.164140899745061,17.1973693611612,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.648032044930808,0.209088296014469,0.87345025498471,0.134864346384821,0.0826534557253359,0.26175594198403,29.8114438571124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0.39736270956253,0.120195449519969,0.147689527174577,0.605798699688886,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.377252682772152,0.468207537349412,0.448176066834085,0.17230640686684,0.476293691283074,0.115884325944855,0.192909220463705,0,0,0,0.354951612318675,0.238436189947321,0.290692833264657,0.0941093804153306,0.0846146078916765,0.182927972872773,0.526139422875686,0,0,0,0.197008964751127,0.818462086339379,0.154936841185966,0,0,0.701794825336225,0.214871054048298,0.191288332068843,0,0.463735671240843 | ||
|short_description=p1@Fer1l6 | |short_description=p1@Fer1l6 | ||
}} | }} |
Latest revision as of 20:36, 26 September 2015
Short description: | p1@Fer1l6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fer1l6_5end |
Coexpression cluster: | MCL_coexpression_mm9:274 |
Association with transcript: | 0bp_to_ENSMUST00000161028_5end |
EntrezGene: | Fer1l6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.53e-13 | 6 |
gut absorptive cell | 1.53e-13 | 6 |
enterocyte | 1.53e-13 | 6 |
columnar/cuboidal epithelial cell | 1.65e-11 | 7 |
intestinal epithelial cell | 8.50e-09 | 9 |
epithelial cell of alimentary canal | 8.50e-09 | 9 |
M cell of gut | 5.30e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.66e-43 | 31 |
gastrointestinal system | 2.83e-29 | 47 |
mucosa | 4.16e-21 | 15 |
intestinal mucosa | 7.23e-17 | 13 |
wall of intestine | 7.23e-17 | 13 |
gastrointestinal system mucosa | 7.23e-17 | 13 |
digestive system | 1.92e-14 | 116 |
digestive tract | 1.92e-14 | 116 |
primitive gut | 1.92e-14 | 116 |
endoderm-derived structure | 4.46e-14 | 118 |
endoderm | 4.46e-14 | 118 |
presumptive endoderm | 4.46e-14 | 118 |
subdivision of digestive tract | 2.44e-12 | 114 |
organ component layer | 3.55e-12 | 24 |
small intestine | 2.89e-10 | 4 |
epithelium of mucosa | 8.50e-09 | 9 |
gastrointestinal system epithelium | 8.50e-09 | 9 |
intestinal epithelium | 8.50e-09 | 9 |
ileal mucosa | 3.61e-08 | 3 |
ileum | 3.61e-08 | 3 |
mucosa of small intestine | 3.61e-08 | 3 |
wall of small intestine | 3.61e-08 | 3 |
simple columnar epithelium | 4.52e-07 | 11 |