FFCP PHASE1:Mm9::chr15:73578846..73578848,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19245 | |EntrezGene=19245 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9D658 | |UniProt=Q9D658 | ||
|association_with_transcript=390bp_to_ENSMUST00000053232,NM_008975,uc007wck.2_5end | |association_with_transcript=390bp_to_ENSMUST00000053232,NM_008975,uc007wck.2_5end | ||
|cluster_id=chr15:73578846..73578848,+ | |||
|description=CAGE_peak_5_at_Ptp4a3_5end | |description=CAGE_peak_5_at_Ptp4a3_5end | ||
|id=chr15:73578846..73578848,+ | |id=chr15:73578846..73578848,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.30e-08!23;UBERON:0001009!1.30e-08!23;UBERON:0007100!2.16e-08!18;UBERON:0000948!2.16e-08!18;UBERON:0005498!2.16e-08!18;UBERON:0004140!2.16e-08!18;UBERON:0009881!2.16e-08!18;UBERON:0004141!2.16e-08!18;UBERON:0003084!2.16e-08!18;UBERON:0007005!2.16e-08!18;UBERON:0004139!2.16e-08!18;UBERON:0004291!2.16e-08!18;UBERON:0004872!3.00e-07!33 | |ontology_enrichment_uberon=UBERON:0004535!1.30e-08!23;UBERON:0001009!1.30e-08!23;UBERON:0007100!2.16e-08!18;UBERON:0000948!2.16e-08!18;UBERON:0005498!2.16e-08!18;UBERON:0004140!2.16e-08!18;UBERON:0009881!2.16e-08!18;UBERON:0004141!2.16e-08!18;UBERON:0003084!2.16e-08!18;UBERON:0007005!2.16e-08!18;UBERON:0004139!2.16e-08!18;UBERON:0004291!2.16e-08!18;UBERON:0004872!3.00e-07!33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.79e-14,18;UBERON:0000948,2.79e-14,18;UBERON:0005498,2.79e-14,18;UBERON:0004140,2.79e-14,18;UBERON:0009881,2.79e-14,18;UBERON:0004141,2.79e-14,18;UBERON:0003084,2.79e-14,18;UBERON:0007005,2.79e-14,18;UBERON:0004139,2.79e-14,18;UBERON:0004291,2.79e-14,18;UBERON:0004535,2.84e-13,23;UBERON:0001009,2.84e-13,23;UBERON:0004872,1.04e-08,33;UBERON:0003914,7.57e-07,47 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.774739940649458,0,0,0.171217968225505,0,0.171200729931206,0.262261207256992,0,0.202475267389826,0.699561878128147,2.68142840554502,1.23402990245165,1.69755860719212,0.17008658030214,0.297872853602656,0.783599367416806,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0.183546752161682,0,0,0,0,0,0,1.67782606057736,0,0.336093799142464,0.257259436035947,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46081959976873,0,0.0914876436024097,0,0,0.56276261003168,0,0,0.142371680799103,0,0.075726193333184,0.151143120213571,1.15945795480671,0,0,0,0,0,1.26399978118577,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0.505524445014783,0.22836775943812,0.517875767294343,0.148442139064825,0.346970653532272,0,0,0.452167921657868,0,0.628332956648377,0,0.144599356919912,0.884610551949874,1.13236794963186,0.220841518460394,0.969750506270444,0,0.292780797011547,0,0,0.239630249011841,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0.162241263067758,0,0.746441823660558,0,0,0.260240885925407,0,0,0.30140963567143,0.204109497453984,0,0.281105173679186,0,0,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0,0,0,0,0.284163499395593,1.44988040774851,0.469052119962192,0.900310307305074,1.65721314909647,0.787056926989615,0.771335564436891,0.930135779001631,1.87791380979733,1.28441876603886,2.79751744852917,2.13417703302824,1.54030738137126,2.04679982395465,0.878200461164203,1.20785776884335,0.210289948564127,0,0,0,0,0.232236671860439,0,0.201683524623343,0.22237804384487,0,0.474529061544512,0.329397909448022,0,0.397912944082302,0.19496408711912,0,0.864552199498777,0,0.379335801906163,0.342745537829186,1.1270773567308,0.203651327845314,0,0.49095073923223,0.189709611372772,0.590440591918409,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0.241177159752417,0.50925170356284,0.575392274901621,0.162135226775035,0,0,1.48856379067401,0.312037673114561,0.252578877947112,0.179397413521912,0,0.739012760666419,0,0.325929952884052,0,0.234690248288502,0.167506257441816,0.952174563544055,0.390267295715598,1.26108115284953,0.8858587585951,1.59454768657487,0.327726629431476,1.55416483679306,0.723245292907558,0,0,0,0,0,0.117211686592203,0,2.52470927204373,0.315508219416257,0,0,0,0,0.566153061577665,0.404810701674894,0,0,0.321321316421807,0,0.35613120733451,0.325773918707152,0.329940245945071,0,0,0,0,0.885905678642318,0.307435147943927,0,0.727067458955011,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0,0,0.177340233642274,0,0,0.913394847343798,0,0.21183207086382,0,0.16488625294148,0.322928853391811,0.0603129249281559,0.119372344003136,0.164140899745061,0.291480836629851,0.370850604021019,0.170870880797853,0.206386867963223,0.370389054739423,0,0.27338845544205,0.228778173206523,0.679913719975421,1.11961161858926,0.690999869022119,0,0.158167996790568,0,0.108005340821801,0,0.218362563746178,0.269728692769641,0.41326727862668,0.26175594198403,0,0.621339313086926,0,0,0.66183396182839,0.194451188344048,0,0.506868376472335,0.234714477291508,0.2604087696879,0.104859344425711,0,0.288030006257865,0,0.202725215290164,0,0.129920822977795,0,0,0.120195449519969,0.295379054349154,0,0.15241361331,0.302478555410522,0,0.192423683280659,0,0.906921534460845,0,0,0.167884616364078,0.19318959403219,0,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0.170733605754134,0.729320151204882,0.209613162627982,0.551530525350042,0.222246727801615,0.206035057238894,0,0.252697211763798,0.25347929989024,0.377252682772152,0.0936415074698824,0.704276676453562,0.574354689556133,0.476293691283074,0.347652977834566,0.578727661391115,0.824171801606613,0.588795680537589,1.02860775715625,0,0.476872379894642,1.16277133305863,0.188218760830661,0.676916863133412,0.914639864363863,0.263069711437843,0.135804113845862,0,0.949080144993393,0.591026894253381,0,0.154936841185966,0.771626443924566,0.749431733813838,0.233931608445408,0.429742108096597,1.53030665655075,1.32354851471709,0.695603506861264 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0.774739940649458,0,0,0.171217968225505,0,0.171200729931206,0.262261207256992,0,0.202475267389826,0.699561878128147,2.68142840554502,1.23402990245165,1.69755860719212,0.17008658030214,0.297872853602656,0.783599367416806,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0.183546752161682,0,0,0,0,0,0,1.67782606057736,0,0.336093799142464,0.257259436035947,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46081959976873,0,0.0914876436024097,0,0,0.56276261003168,0,0,0.142371680799103,0,0.075726193333184,0.151143120213571,1.15945795480671,0,0,0,0,0,1.26399978118577,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0.505524445014783,0.22836775943812,0.517875767294343,0.148442139064825,0.346970653532272,0,0,0.452167921657868,0,0.628332956648377,0,0.144599356919912,0.884610551949874,1.13236794963186,0.220841518460394,0.969750506270444,0,0.292780797011547,0,0,0.239630249011841,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0.162241263067758,0,0.746441823660558,0,0,0.260240885925407,0,0,0.30140963567143,0.204109497453984,0,0.281105173679186,0,0,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0,0,0,0,0.284163499395593,1.44988040774851,0.469052119962192,0.900310307305074,1.65721314909647,0.787056926989615,0.771335564436891,0.930135779001631,1.87791380979733,1.28441876603886,2.79751744852917,2.13417703302824,1.54030738137126,2.04679982395465,0.878200461164203,1.20785776884335,0.210289948564127,0,0,0,0,0.232236671860439,0,0.201683524623343,0.22237804384487,0,0.474529061544512,0.329397909448022,0,0.397912944082302,0.19496408711912,0,0.864552199498777,0,0.379335801906163,0.342745537829186,1.1270773567308,0.203651327845314,0,0.49095073923223,0.189709611372772,0.590440591918409,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0.241177159752417,0.50925170356284,0.575392274901621,0.162135226775035,0,0,1.48856379067401,0.312037673114561,0.252578877947112,0.179397413521912,0,0.739012760666419,0,0.325929952884052,0,0.234690248288502,0.167506257441816,0.952174563544055,0.390267295715598,1.26108115284953,0.8858587585951,1.59454768657487,0.327726629431476,1.55416483679306,0.723245292907558,0,0,0,0,0,0.117211686592203,0,2.52470927204373,0.315508219416257,0,0,0,0,0.566153061577665,0.404810701674894,0,0,0.321321316421807,0,0.35613120733451,0.325773918707152,0.329940245945071,0,0,0,0,0.885905678642318,0.307435147943927,0,0.727067458955011,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0,0,0.177340233642274,0,0,0.913394847343798,0,0.21183207086382,0,0.16488625294148,0.322928853391811,0.0603129249281559,0.119372344003136,0.164140899745061,0.291480836629851,0.370850604021019,0.170870880797853,0.206386867963223,0.370389054739423,0,0.27338845544205,0.228778173206523,0.679913719975421,1.11961161858926,0.690999869022119,0,0.158167996790568,0,0.108005340821801,0,0.218362563746178,0.269728692769641,0.41326727862668,0.26175594198403,0,0.621339313086926,0,0,0.66183396182839,0.194451188344048,0,0.506868376472335,0.234714477291508,0.2604087696879,0.104859344425711,0,0.288030006257865,0,0.202725215290164,0,0.129920822977795,0,0,0.120195449519969,0.295379054349154,0,0.15241361331,0.302478555410522,0,0.192423683280659,0,0.906921534460845,0,0,0.167884616364078,0.19318959403219,0,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0.170733605754134,0.729320151204882,0.209613162627982,0.551530525350042,0.222246727801615,0.206035057238894,0,0.252697211763798,0.25347929989024,0.377252682772152,0.0936415074698824,0.704276676453562,0.574354689556133,0.476293691283074,0.347652977834566,0.578727661391115,0.824171801606613,0.588795680537589,1.02860775715625,0,0.476872379894642,1.16277133305863,0.188218760830661,0.676916863133412,0.914639864363863,0.263069711437843,0.135804113845862,0,0.949080144993393,0.591026894253381,0,0.154936841185966,0.771626443924566,0.749431733813838,0.233931608445408,0.429742108096597,1.53030665655075,1.32354851471709,0.695603506861264 | ||
|short_description=p5@Ptp4a3 | |short_description=p5@Ptp4a3 | ||
}} | }} |
Latest revision as of 22:56, 26 September 2015
Short description: | p5@Ptp4a3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ptp4a3_5end |
Coexpression cluster: | NA |
Association with transcript: | 390bp_to_ENSMUST00000053232, NM_008975, uc007wck.2_5end |
EntrezGene: | Ptp4a3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 2.79e-14 | 18 |
heart | 2.79e-14 | 18 |
primitive heart tube | 2.79e-14 | 18 |
primary heart field | 2.79e-14 | 18 |
anterior lateral plate mesoderm | 2.79e-14 | 18 |
heart tube | 2.79e-14 | 18 |
heart primordium | 2.79e-14 | 18 |
cardiac mesoderm | 2.79e-14 | 18 |
cardiogenic plate | 2.79e-14 | 18 |
heart rudiment | 2.79e-14 | 18 |
cardiovascular system | 2.84e-13 | 23 |
circulatory system | 2.84e-13 | 23 |
splanchnic layer of lateral plate mesoderm | 1.04e-08 | 33 |
epithelial tube | 7.57e-07 | 47 |