FFCP PHASE1:Mm9::chr16:30055713..30055722,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:30055713..30055722,+ | |||
|description=CAGE_peak_at_chr16:30055713..30055722,+ | |description=CAGE_peak_at_chr16:30055713..30055722,+ | ||
|id=chr16:30055713..30055722,+ | |id=chr16:30055713..30055722,+ | ||
|ontology_enrichment_celltype=CL:0000066!8.83e-26!25;CL:0002076!2.26e-25!15;CL:0002563!2.74e-24!9;CL:0002251!2.74e-24!9;CL:0000223!1.84e-21!20;CL:0000239!1.82e-16!6;CL:0000677!1.82e-16!6;CL:0000212!1.82e-16!6;CL:0000584!1.82e-16!6;CL:0000075!5.20e-14!7;CL:0000068!1.38e-09!3;CL:0002202!1.38e-09!3;CL:0000069!1.38e-09!3;CL:0002632!1.38e-09!3;CL:0002368!1.38e-09!3;CL:0000307!1.38e-09!3;CL:0000377!1.38e-09!3;CL:0002250!2.14e-09!3;CL:0000473!3.99e-09!3;CL:0000627!3.99e-09!3;CL:0000682!3.99e-09!3;CL:0000063!1.62e-08!66 | |ontology_enrichment_celltype=CL:0000066!8.83e-26!25;CL:0002076!2.26e-25!15;CL:0002563!2.74e-24!9;CL:0002251!2.74e-24!9;CL:0000223!1.84e-21!20;CL:0000239!1.82e-16!6;CL:0000677!1.82e-16!6;CL:0000212!1.82e-16!6;CL:0000584!1.82e-16!6;CL:0000075!5.20e-14!7;CL:0000068!1.38e-09!3;CL:0002202!1.38e-09!3;CL:0000069!1.38e-09!3;CL:0002632!1.38e-09!3;CL:0002368!1.38e-09!3;CL:0000307!1.38e-09!3;CL:0000377!1.38e-09!3;CL:0002250!2.14e-09!3;CL:0000473!3.99e-09!3;CL:0000627!3.99e-09!3;CL:0000682!3.99e-09!3;CL:0000063!1.62e-08!66 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,6.71e-32,15;CL:0000066,3.19e-31,25;CL:0000068,4.54e-30,3;CL:0002202,4.54e-30,3;CL:0000069,4.54e-30,3;CL:0002632,4.54e-30,3;CL:0002368,4.54e-30,3;CL:0000307,4.54e-30,3;CL:0000377,4.54e-30,3;CL:0000223,6.18e-24,20;CL:0002563,7.01e-18,9;CL:0002251,7.01e-18,9;CL:0002250,2.32e-14,3;CL:0000682,1.62e-13,3;CL:0000239,2.19e-07,6;CL:0000677,2.19e-07,6;CL:0000584,2.19e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!2.74e-24!9;UBERON:0004808!2.74e-24!9;UBERON:0001277!2.74e-24!9;UBERON:0001242!6.95e-20!13;UBERON:0000060!6.95e-20!13;UBERON:0001262!6.95e-20!13;UBERON:0004786!6.95e-20!13;UBERON:0000485!1.50e-19!11;UBERON:0000344!5.89e-17!15;UBERON:0000160!4.26e-14!43;UBERON:0005409!8.01e-12!59;UBERON:0004923!7.91e-10!24;UBERON:0003126!1.38e-09!3;UBERON:0001005!1.38e-09!3;UBERON:0007196!1.38e-09!3;UBERON:0001558!1.38e-09!3;UBERON:0004921!9.81e-08!126;UBERON:0004185!9.81e-08!126;UBERON:0001007!1.58e-07!128;UBERON:0001555!1.58e-07!128;UBERON:0007026!1.58e-07!128;UBERON:0004119!2.49e-07!130;UBERON:0000925!2.49e-07!130;UBERON:0006595!2.49e-07!130 | |ontology_enrichment_uberon=UBERON:0003350!2.74e-24!9;UBERON:0004808!2.74e-24!9;UBERON:0001277!2.74e-24!9;UBERON:0001242!6.95e-20!13;UBERON:0000060!6.95e-20!13;UBERON:0001262!6.95e-20!13;UBERON:0004786!6.95e-20!13;UBERON:0000485!1.50e-19!11;UBERON:0000344!5.89e-17!15;UBERON:0000160!4.26e-14!43;UBERON:0005409!8.01e-12!59;UBERON:0004923!7.91e-10!24;UBERON:0003126!1.38e-09!3;UBERON:0001005!1.38e-09!3;UBERON:0007196!1.38e-09!3;UBERON:0001558!1.38e-09!3;UBERON:0004921!9.81e-08!126;UBERON:0004185!9.81e-08!126;UBERON:0001007!1.58e-07!128;UBERON:0001555!1.58e-07!128;UBERON:0007026!1.58e-07!128;UBERON:0004119!2.49e-07!130;UBERON:0000925!2.49e-07!130;UBERON:0006595!2.49e-07!130 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,4.54e-30,3;UBERON:0001005,4.54e-30,3;UBERON:0007196,4.54e-30,3;UBERON:0001558,4.54e-30,3;UBERON:0003350,7.01e-18,9;UBERON:0004808,7.01e-18,9;UBERON:0001277,7.01e-18,9;UBERON:0000485,1.03e-14,11;UBERON:0001242,1.63e-12,13;UBERON:0001262,1.63e-12,13;UBERON:0004786,1.63e-12,13;UBERON:0000344,6.76e-11,15;UBERON:0004923,6.26e-07,24 | |||
|phase1_expression=0,0.348975407639361,0.909998478779072,0.90739263392049,0.500895729946347,1.84667199103079,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0.57423196411502,1.29228598847722,1.29282739611533,0,0.252030129759931,0,0,0,0,4.33277429626912,0.498703936075477,4.90006455029686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16491041011214,1.77351905832569,4.54972000513305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0.120625849856312,0,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0.348975407639361,0.909998478779072,0.90739263392049,0.500895729946347,1.84667199103079,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0.57423196411502,1.29228598847722,1.29282739611533,0,0.252030129759931,0,0,0,0,4.33277429626912,0.498703936075477,4.90006455029686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16491041011214,1.77351905832569,4.54972000513305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0.120625849856312,0,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr16:30055713..30055722,+ | |short_description=p@chr16:30055713..30055722,+ | ||
}} | }} |
Latest revision as of 06:50, 6 August 2015
Short description: | p@chr16:30055713..30055722, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:30055713..30055722, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 6.71e-32 | 15 |
epithelial cell | 3.19e-31 | 25 |
duct epithelial cell | 4.54e-30 | 3 |
epithelial cell of tracheobronchial tree | 4.54e-30 | 3 |
branched duct epithelial cell | 4.54e-30 | 3 |
epithelial cell of lower respiratory tract | 4.54e-30 | 3 |
respiratory epithelial cell | 4.54e-30 | 3 |
tracheal epithelial cell | 4.54e-30 | 3 |
tracheoblast | 4.54e-30 | 3 |
endodermal cell | 6.18e-24 | 20 |
intestinal epithelial cell | 7.01e-18 | 9 |
epithelial cell of alimentary canal | 7.01e-18 | 9 |
intestinal crypt stem cell | 2.32e-14 | 3 |
M cell of gut | 1.62e-13 | 3 |
brush border epithelial cell | 2.19e-07 | 6 |
gut absorptive cell | 2.19e-07 | 6 |
enterocyte | 2.19e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
trachea | 4.54e-30 | 3 |
respiratory airway | 4.54e-30 | 3 |
tracheobronchial tree | 4.54e-30 | 3 |
lower respiratory tract | 4.54e-30 | 3 |
epithelium of mucosa | 7.01e-18 | 9 |
gastrointestinal system epithelium | 7.01e-18 | 9 |
intestinal epithelium | 7.01e-18 | 9 |
simple columnar epithelium | 1.03e-14 | 11 |
intestinal mucosa | 1.63e-12 | 13 |
wall of intestine | 1.63e-12 | 13 |
gastrointestinal system mucosa | 1.63e-12 | 13 |
mucosa | 6.76e-11 | 15 |
organ component layer | 6.26e-07 | 24 |